Factsheet for Bra027368.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97548	Canola	mitochondrion	97.83	97.83
CDY52268	Canola	mitochondrion	93.49	93.49
AT3G14170.2	Thale cress	cytosol, golgi, mitochondrion, nucleus	78.5	78.66
KRG89920	Soybean	extracellular, mitochondrion	23.47	64.32
VIT_09s0002g00760.t01	Wine grape	mitochondrion	51.08	48.96
Zm00001d032126_P001	Maize	cytosol	22.49	48.72
PGSC0003DMT400074262	Potato	cytosol	47.53	46.35
Zm00001d038770_P001	Maize	cytosol	22.49	45.6
PGSC0003DMT400058976	Potato	mitochondrion	46.15	45.17
Solyc03g122080.2.1	Tomato	mitochondrion	45.76	44.79
Solyc12g049500.1.1	Tomato	cytosol	44.58	44.49
GSMUA_Achr1P21840_001	Banana	extracellular	44.18	41.87
Zm00001d027907_P002	Maize	cytosol, mitochondrion, nucleus, peroxisome	28.8	40.0
Zm00001d017634_P001	Maize	cytosol	19.13	38.96
EER95393	Sorghum	cytosol	42.6	38.16
Os03t0181800-01	Rice	cytosol	41.42	36.65
TraesCS4A01G006800.1	Wheat	cytosol	41.81	35.93
TraesCS4D01G297000.1	Wheat	cytosol	41.62	35.76
HORVU4Hr1G077070.1	Barley	cytosol	41.42	35.59
TraesCS4B01G298200.1	Wheat	cytosol	41.22	35.42
Zm00001d012110_P001	Maize	nucleus	13.61	27.94
Bra031640.1-P	Field mustard	cytosol, nucleus, peroxisome	32.54	23.84
Bra018603.1-P	Field mustard	cytosol, nucleus, vacuole	34.32	23.64
Bra032701.1-P	Field mustard	mitochondrion	29.19	23.49
Bra034878.1-P	Field mustard	mitochondrion	29.98	23.28
Bra024618.1-P	Field mustard	nucleus	22.09	21.71
Bra016331.1-P	Field mustard	nucleus	22.09	20.9
Bra005615.1-P	Field mustard	plastid	21.7	20.11
Bra001755.1-P	Field mustard	nucleus	21.7	18.39

Protein Annotations

EnsemblPlants:Bra027368.1	EnsemblPlants:Bra027368.1-P	EnsemblPlantsGene:Bra027368	InterPro:DUF936_pln	PANTHER:PTHR31928	PANTHER:PTHR31928:SF2
PFAM:PF06075	SEG:seg	UniParc:UPI0002547DDF	UniProt:M4EF06	MapMan:20.1.5.4.2	:

Description

AT3G14170 (E=8e-189) | unknown protein

Coordinates

chrA05:+:20560714..20562495

Molecular Weight (calculated)

55619.1 Da

IEP (calculated)

10.188

GRAVY (calculated)

-0.537

Length

507 amino acids

Sequence
(BLAST)

001: MASLTPRVLI KLLQTMNTNI KVRGEYRSVL LQVISIVPAL AGSELWPNQG FFIKVSDSSH STYVSLRNED NELILNNKLG LGQFFYVDKL EAGTPVPVMV
101: GVRPISGRHP FVGNPKDLMQ MLVPTETTTP PMQEDNHKQK KDGARSNAVE SLRRRQDFVI KEEKTGVASR YMQGVSNARA SGSDSSSGGS NNESEAGSVR
201: ASKRVGGLAK GKQREHKDQL HQAAPPQSRP ATAPTRAETK KLSLSSNVNC VNRKSSFSED ASWRSLTANL TKMGKGMLRR RNIAALLAAE AQREALAASH
301: LLNMFADLSS SASPKNPHTS LRSFFTLQSL LDQAQVTAAP CKEKSSQLLN IHPICTEPEK PSKRASLASS RATTKSSKTL TEAEKLEWVT GNGTEEIKAM
401: RDAMTQETRS WFMRFLEEAI DTGFHASVQV KKGKTKGSRA EEPDNHIAET LSQLKQANEW LDKVKSDHHS GDDSLLENIE RLKKKIYSCL LLYVDSAASA
501: IAVSTSS

Best Arabidopsis Sequence Match ( AT3G14170.1 )
(BLAST)

001: MASLTPRVLI KLLETMNTNI KVRGEYRSVL LQVISIVPAL AGSELWPNQG FFIKVSDSSH STYVSLSNED NELILNNKLG IGQFFYVDKL DAGTPVPVLV
101: GVRPISGRHP FVGNPKDLMQ MLVPSETTPR EEEYHNQKKK DGARSNIVEN IRKHQPFVIK EEKTGVASRY MKGISNSKAS GSDSSSGGSN NEGETGSIMV
201: AKKVGVLAKG KQREHKDQAR QAGPLQCRPA TAPTKAEPKK LSLSSTVNYI NRKSNSAEDA SWSSLPVSLS KLGKGMLRRR NLAALIAAEV QREALAASHL
301: IKCISMFAEL SSNASPKNPH TSLRNFFTLQ SILDQVQVTV VASKDKSFQP VNIHSLWMEP EKLSKKASLS SSRATMKPSK ALTEAEKLEW VKGNGTEEIK
401: ELTNTLKRET RSWFLKFLED ALDTGLHATV PEKKGKTKGA RLAEPDNHIA ETLSQLKQAN EWLEKVKNDN LSSDNSLLEN IERLKKKIYS CLLLYVDSAA
501: SAIGV

Arabidopsis Description

Plant protein of unknown function (DUF936) [Source:TAIR;Acc:AT3G14170]
SUBAcon: [mitochondrion,golgi,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.