Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82287 | Canola | endoplasmic reticulum | 97.16 | 92.37 |
| CDY22966 | Canola | endoplasmic reticulum | 96.49 | 91.59 |
| AT3G19610.1 | Thale cress | vacuole | 82.11 | 76.72 |
| Solyc10g049800.1.1 | Tomato | cytosol | 23.41 | 34.23 |
| PGSC0003DMT400008388 | Potato | cytosol | 35.28 | 32.21 |
| PGSC0003DMT400066158 | Potato | nucleus | 34.62 | 31.7 |
| Solyc01g107120.2.1 | Tomato | cytosol | 33.11 | 30.51 |
| GSMUA_Achr4P10950_001 | Banana | cytosol, mitochondrion, nucleus | 26.92 | 27.52 |
| GSMUA_Achr4P03420_001 | Banana | cytosol | 26.09 | 26.35 |
| Os07t0588300-00 | Rice | plastid | 26.42 | 24.38 |
| TraesCS2D01G193600.1 | Wheat | plastid | 26.09 | 23.93 |
| HORVU2Hr1G035200.1 | Barley | plastid | 15.38 | 23.71 |
| TraesCS2B01G212600.1 | Wheat | plastid | 26.09 | 23.71 |
| TraesCS2A01G194300.1 | Wheat | plastid | 25.42 | 23.24 |
| Zm00001d006732_P001 | Maize | plastid | 24.92 | 22.96 |
| Bra005615.1-P | Field mustard | plastid | 20.23 | 22.12 |
| KXG36592 | Sorghum | plastid | 24.25 | 21.97 |
| Bra027368.1-P | Field mustard | mitochondrion | 18.39 | 21.7 |
| Bra031640.1-P | Field mustard | cytosol, nucleus, peroxisome | 25.08 | 21.68 |
| Bra034878.1-P | Field mustard | mitochondrion | 23.41 | 21.44 |
| Bra032701.1-P | Field mustard | mitochondrion | 22.41 | 21.27 |
| Bra024618.1-P | Field mustard | nucleus | 18.23 | 21.12 |
| Bra018603.1-P | Field mustard | cytosol, nucleus, vacuole | 25.75 | 20.92 |
| Bra016331.1-P | Field mustard | nucleus | 17.89 | 19.96 |
Protein Annotations
| EnsemblPlants:Bra001755.1 | EnsemblPlants:Bra001755.1-P | EnsemblPlantsGene:Bra001755 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008017 | InterPro:DUF936_pln | ncoils:Coil | PANTHER:PTHR31928 | PANTHER:PTHR31928:SF12 | PFAM:PF06075 |
| SEG:seg | UniParc:UPI0002540556 | UniProt:M4CC25 | MapMan:20.1.5.4.2 | : | : |
Description
AT3G19610 (E=2e-246) | unknown protein
Coordinates
chrA03:-:18255780..18257848
Molecular Weight (calculated)
68407.2 Da
IEP (calculated)
9.900
GRAVY (calculated)
-0.774
Length
598 amino acids
Sequence
(BLAST)
(BLAST)
001: MAELRSGVLF KLLEEMGVGK ARRDVDHRPV LLQIRSIIPV LAAGGLWPNK GFFLRISDST HSMYASLPRE ENDLVLYDKL QIGQLIFVEK LEFAYPVPMI
101: KGIRPTPGRR ACTGEPIDLI PKERIEKFCA SLSDTEESYD QQVKRPRRTR WSSSSISEVN VSDFGLLKNL SSVMEERDDT ESMVSNCSSS LSSAARRRSW
201: MGLGDASKRR ESLDPSMVKS HVHDMRLHVS RTRSYPAASP SPSVRSCGVI EEKSSSRTRR RDSVVSPSPK WAKSLSYGSG SNKSKNLLLP PRSNTLESSD
301: SISRKRSWTE TEILWNSLPP RVANLGKEIL RQRDKAIRTA SQALLEASAA ERLLKCLRSY SELSDKRNQH HHNQQPPIGE FLSFQDELSK SRLIIQSLST
401: EETKHCNSRT GEERREKATQ WIKSALATDL KPVSLPASKP TQSPARKSFT LIAQETNNRE DNTRERDSGS GERKERLSRA ASELRNLVKE EGRRWYLSRV
501: EKYLDEISNV TKWREMSSQQ VGETMYQIKR VSDWLDAMVK GEEEEQEEEE VMMMSESERE ACGRVRNKIY RILLRHVEKT SLLSHQRNTN LMSHQQYY
101: KGIRPTPGRR ACTGEPIDLI PKERIEKFCA SLSDTEESYD QQVKRPRRTR WSSSSISEVN VSDFGLLKNL SSVMEERDDT ESMVSNCSSS LSSAARRRSW
201: MGLGDASKRR ESLDPSMVKS HVHDMRLHVS RTRSYPAASP SPSVRSCGVI EEKSSSRTRR RDSVVSPSPK WAKSLSYGSG SNKSKNLLLP PRSNTLESSD
301: SISRKRSWTE TEILWNSLPP RVANLGKEIL RQRDKAIRTA SQALLEASAA ERLLKCLRSY SELSDKRNQH HHNQQPPIGE FLSFQDELSK SRLIIQSLST
401: EETKHCNSRT GEERREKATQ WIKSALATDL KPVSLPASKP TQSPARKSFT LIAQETNNRE DNTRERDSGS GERKERLSRA ASELRNLVKE EGRRWYLSRV
501: EKYLDEISNV TKWREMSSQQ VGETMYQIKR VSDWLDAMVK GEEEEQEEEE VMMMSESERE ACGRVRNKIY RILLRHVEKT SLLSHQRNTN LMSHQQYY
001: MQQIEKRSLL CSFLSVFHLI HLQALLLEMA ELRSGVLFKL LEEMGVGKVR RDVDHRPVLL QIRCIIPVLA AGGLWPNKGF FLRITDSTHS IYVSLPREEN
101: DLVLYDKLQI GQLIFVEKLE FAYPVPMIKG IRPTPGRRAC TGDPIDLIPK ERIEKFCVGL SDIEENYDHQ VKKPRRTRWN NSSVSELNFT DLGLSKNLSS
201: VMEEKDDTES MISSCSSSFS SAARRRSWIG SADNRKRRDS LDPSMIKNHD HDTKHVSRAR SSSATSPSLS IRSYGGIEEK SSSRTRRRDV VVSPSPRWSK
301: SLSYGSRSNK SKNLLPPKSN TFESSDPISR KRSWTETEIL WDSLPPKVVN LGKEILRQRD TAIRAASQAL LEASAAERLL KCLRSYSELS DRRNQHQENQ
401: QPPIQDFLSF QDELSKSRLI IQSLSTEKTE HCNANIVKTG DERREKATQW IKSALATDLK LVSLSASKPT QSPGRKGLTL IAQESDNREG NASESNSRLG
501: EIKERLSRAS SELRNWLKEE GRSWYLNRVE KYLDEISNGT KWREMRSEEV GETMYQIKRV SDWLDTIVKG EEDEEEKMVM MMMSESETEA CGRVRNKIYR
601: ILLKHVETTS LLSHQRSTSL MSHHQQQQHE QHLFQKTMSL
101: DLVLYDKLQI GQLIFVEKLE FAYPVPMIKG IRPTPGRRAC TGDPIDLIPK ERIEKFCVGL SDIEENYDHQ VKKPRRTRWN NSSVSELNFT DLGLSKNLSS
201: VMEEKDDTES MISSCSSSFS SAARRRSWIG SADNRKRRDS LDPSMIKNHD HDTKHVSRAR SSSATSPSLS IRSYGGIEEK SSSRTRRRDV VVSPSPRWSK
301: SLSYGSRSNK SKNLLPPKSN TFESSDPISR KRSWTETEIL WDSLPPKVVN LGKEILRQRD TAIRAASQAL LEASAAERLL KCLRSYSELS DRRNQHQENQ
401: QPPIQDFLSF QDELSKSRLI IQSLSTEKTE HCNANIVKTG DERREKATQW IKSALATDLK LVSLSASKPT QSPGRKGLTL IAQESDNREG NASESNSRLG
501: EIKERLSRAS SELRNWLKEE GRSWYLNRVE KYLDEISNGT KWREMRSEEV GETMYQIKRV SDWLDTIVKG EEDEEEKMVM MMMSESETEA CGRVRNKIYR
601: ILLKHVETTS LLSHQRSTSL MSHHQQQQHE QHLFQKTMSL
Arabidopsis Description
Plant protein of unknown function (DUF936) [Source:TAIR;Acc:AT3G19610]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.