Factsheet for Bra005615.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42075	Canola	plastid	98.9	98.9
AT2G31920.1	Thale cress	plastid	79.16	74.02
VIT_13s0320g00010.t01	Wine grape	cytosol	38.94	37.63
KRH43579	Soybean	plastid	37.29	35.85
KRH13842	Soybean	plastid	36.38	35.28
Solyc01g081640.2.1	Tomato	cytosol	35.83	31.26
PGSC0003DMT400079932	Potato	cytosol	33.82	30.94
Bra031640.1-P	Field mustard	cytosol, nucleus, peroxisome	29.07	22.98
Bra027368.1-P	Field mustard	mitochondrion	20.11	21.7
Bra018603.1-P	Field mustard	cytosol, nucleus, vacuole	28.7	21.33
Bra034878.1-P	Field mustard	mitochondrion	24.5	20.52
Bra001755.1-P	Field mustard	nucleus	22.12	20.23
Bra032701.1-P	Field mustard	mitochondrion	23.03	20.0
Bra024618.1-P	Field mustard	nucleus	18.46	19.57
Bra016331.1-P	Field mustard	nucleus	18.65	19.03

Protein Annotations

EnsemblPlants:Bra005615.1	EnsemblPlants:Bra005615.1-P	EnsemblPlantsGene:Bra005615	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0008017	InterPro:DUF936_pln	ncoils:Coil	PANTHER:PTHR31928	PANTHER:PTHR31928:SF7	PFAM:PF06075
SEG:seg	UniParc:UPI00025477D4	UniProt:M4CN27	MapMan:20.1.5.4.2	:	:

Description

AT2G31920 (E=7e-141) | unknown protein

Coordinates

chrA05:-:6541283..6543387

Molecular Weight (calculated)

60614.7 Da

IEP (calculated)

10.309

GRAVY (calculated)

-0.395

Length

547 amino acids

Sequence
(BLAST)

001: MASLTPGVLS NLLELAAGKV ISSSSSPPLL SSHRFPLLQV IEIVPCLSDN QWRSERFFVK VSDSLHAAYV AVSAADDADL IRSDEIQLGQ FVYIRGGLHV
101: EKGCPVPVVR GLKPVPKRRT CVGNPSDLVS SDLLLDFTPV SVDTTKKKRN LGGDTRRLSL DSARRSCWDH TSPPVTRRRD AALLLSSSPR LKPKLVLSDK
201: NLPKNESPSK HLNCETPTLR NRNVVKPASP ISIVKSPKDG IKPLSKAVTP TVAYYKLPSS HRTWSDQRIS WTGLPKTIQV LGKEVSTHRQ VAVKAAVKAL
301: EEASTMESVL LSLQSFAELC DSSKHLSAGQ VVRRFLDIYH STLNTCKAIH LLLTQNRNNG SCRSAAMKNA AAWVQDAVVT GFSQFNLFKE PGKQDEAASP
401: RDQHHYIVIH NSSEKLNPKE TTSSRNQSYK GVKLTSTKHR SVSSERSNLE GKNRLKESLS LADELLRVSS QWFLKYLENS LKKGSFLVKK EEANGKESLV
501: GHLKAVNCWL DDLISNRGEV SEKVEDLRKK LQRFLLRHIE SAIGETM

Best Arabidopsis Sequence Match ( AT2G31920.1 )
(BLAST)

001: MASLTPGVLS NLLNIAAGNS PSSPPLLSSH RSPLLQVIEI VPCLSDDQWR SEAFFVKVSD SLHAAYVAVS TGDDADLIRS DEIQLGQFIY ICGGLHVEKG
101: CPVPVIRGLK PVPKRRMCVG NPSDLYSSDL LLPFTQVSVS PTTTKKKNLV ETRRLSLDSA RRSCWDQTPP VTRRRDAALL LSSPRLKSKL VLNDKSLLKI
201: ESPSKYFNCG TSPALRNKNV VKPGSPISMA SSPKDGIKSP ISKHLNCETP ALRSRYVVKP ASPISVTRSP KDGIKSLSKA VTPPVALFKV PSSHMTWSDQ
301: RMSWSGLPKT IQLLGKEVSS HRQVAVSAAV SALEEASAME SVLFSLQAFA ELCDSTKKLS TGQVVARFLD IYHNTQNTCK AVHRLLTQNR NNGSCRLVVN
401: KNATSWVQAA VVTGFSQFNL FKEPGKKGDA ADHHYIVMQN SSEKLNPKET TSSRTPSYKG AKPPATKHCS VSDRSSLEGK SSLKDSTSLA DELVQVSSQW
501: FLKYLENSLN KGSFLVKTEE TNGKESLLVH LKALNHWLDD LNLNRTETNE KVEDLRKKLQ RFLLEHIESV IGDTYNMKRK IINSI

Arabidopsis Description

Elongation factor 1-delta, putative (DUF936) [Source:UniProtKB/TrEMBL;Acc:Q9SKA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.