Factsheet for Bra016331.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57317	Canola	nucleus	96.83	94.71
Bra024618.1-P	Field mustard	nucleus	80.41	83.53
AT1G23790.1	Thale cress	nucleus	78.17	80.89
KRH69557	Soybean	extracellular, mitochondrion, nucleus, vacuole	54.85	51.31
Os01t0108800-01	Rice	cytosol	21.64	50.22
VIT_01s0026g00030.t01	Wine grape	mitochondrion	55.22	50.0
KRH74610	Soybean	cytosol, extracellular, mitochondrion, nucleus	54.85	50.0
PGSC0003DMT400079598	Potato	mitochondrion	54.29	48.83
Solyc05g005580.2.1	Tomato	mitochondrion	54.1	48.66
GSMUA_Achr8P14440_001	Banana	mitochondrion	43.47	45.33
TraesCS3A01G000300.1	Wheat	cytosol, extracellular, mitochondrion, nucleus	42.16	42.09
GSMUA_Achr9P00810_001	Banana	cytosol, mitochondrion, nucleus	43.66	41.49
TraesCS3D01G008800.1	Wheat	cytosol, extracellular, mitochondrion, nucleus	42.35	41.42
TraesCS3B01G003800.1	Wheat	cytosol, extracellular, mitochondrion, nucleus	41.6	40.77
EES02630	Sorghum	cytosol, extracellular, mitochondrion, nucleus	39.74	37.3
HORVU3Hr1G000140.4	Barley	plastid	41.98	35.94
Zm00001d040147_P001	Maize	nucleus	40.11	35.71
OQU86510	Sorghum	cytosol	31.72	34.76
Bra027368.1-P	Field mustard	mitochondrion	20.9	22.09
Bra031640.1-P	Field mustard	cytosol, nucleus, peroxisome	28.36	21.97
Bra018603.1-P	Field mustard	cytosol, nucleus, vacuole	28.92	21.06
Bra032701.1-P	Field mustard	mitochondrion	23.51	20.0
Bra034878.1-P	Field mustard	mitochondrion	24.07	19.75
Bra005615.1-P	Field mustard	plastid	19.03	18.65
Bra001755.1-P	Field mustard	nucleus	19.96	17.89

Protein Annotations

EnsemblPlants:Bra016331.1	EnsemblPlants:Bra016331.1-P	EnsemblPlantsGene:Bra016331	InterPro:DUF936_pln	PANTHER:PTHR31928	PANTHER:PTHR31928:SF20
PFAM:PF06075	SEG:seg	UniParc:UPI00025463D2	UniProt:M4DIK4	MapMan:20.1.5.4.2	:

Description

AT1G23790 (E=9e-194) | unknown protein

Coordinates

chrA08:-:17923125..17924986

Molecular Weight (calculated)

58789.3 Da

IEP (calculated)

10.446

GRAVY (calculated)

-0.609

Length

536 amino acids

Sequence
(BLAST)

001: MAALAPGILQ KLIDGMKTGV KPTGEHRSSL LQVTDIVPID LDEKNLLPKQ GFFIKLSDSS HSIYVTLPSD QDDVVLSNKM QLGQFIYVDR LDPGTPVPIV
101: QGARPIPGRH PLLGTPEVSA RGKERQRRGS WGQNGDVASP FVLKSASWGQ NGDVASPFVL KSGTLDFDQC TPVAKQRRFG FGAASPMTRG GVRCSYGGKM
201: GDLRGESPGS VMRKSCVVPP SSKFPRSRSV CDRETTAKMI SVSSALLSPF KSSAKKSNSP PPSVRTRRAT AAAALMEEER EAPKSISKLA SPKNSNVEKL
301: EKSWSLTGRL STLSKEAMQQ RETAQKIALQ DLREATVTET VVRHLKTLAN LSKSAKPDCP AACFEKFLEF HKQISETMRE ISSIEAAVSS ASENKSEDGS
401: TSLILNEIQH NSIDQEKTTS KRRATSLKQQ QNHKQLRSND ENKNPSGLGN TARLAKETEK EAANWFMEFI DKALEKGMKK CKGTGDADVK KVPQSLILQV
501: VNWVEAEQSA DNNTRRQLHP RASQITRKLR IKMKNP

Best Arabidopsis Sequence Match ( AT1G23790.1 )
(BLAST)

001: MAALAPGILQ KLIDGMKTGV KPTGEHRSSL LQVTDIVPID LDEKNLLPKQ GFFIKVSDSS HSIYVSLPSD QDDDVLSNKM QLGQFIYVDR LDPGTPVPII
101: KGARPIPGRH PLLGTPEPLM STRGKIESSR PRRGSWGQNG DVSSPFVLKP APLDFDQCTP AKHRLGTGRF MAASPNVMTR GRSPGGVRCS YGGGLLSKMA
201: ESPAAMMRKS CVVPPSSKFP RSKSVCDRET MAKNSVLFSP FKSSAKKNDS PPPSVRTRRA TAASLLEDER EAPKSTSKYS KLEKPEKSLS LPGRLSTLSK
301: EAMQQRETAQ KIALQALREA TTTETVVRHL KTFANLSKSA KADCPAACFD KFLEFHSQIS ETMNEIASIE AAASPATTEK KSEDGSLILH EIQHNSIDQE
401: KTTSKRRILL KQQQKRSNDE NKNPAVSLSG LGNTARLVKE IEKEAANWFM EFIEKALEKG MKKCKGTSDA DVKKVPQSLI LKVVNWVEEE HSADNTKRPV
501: HPKASHITRK LRIKLKNP

Arabidopsis Description

At1g23790 [Source:UniProtKB/TrEMBL;Acc:Q9ZUB7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.