Factsheet for Bra034878.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69222	Canola	mitochondrion, plastid	63.55	97.88
CDY43695	Canola	mitochondrion	95.1	93.52
AT4G13370.1	Thale cress	endoplasmic reticulum, mitochondrion	83.31	80.83
Bra032701.1-P	Field mustard	mitochondrion	77.49	80.32
VIT_11s0016g04380.t01	Wine grape	plastid	60.8	55.92
KRH03797	Soybean	mitochondrion	58.04	53.84
PGSC0003DMT400001026	Potato	mitochondrion	55.9	53.05
Solyc12g007020.1.1	Tomato	mitochondrion	55.59	52.99
KRH56681	Soybean	vacuole	58.04	46.11
GSMUA_Achr7P21900_001	Banana	mitochondrion	45.48	43.17
GSMUA_Achr4P10330_001	Banana	mitochondrion	46.4	41.56
Os12t0120000-01	Rice	cytosol, mitochondrion, nucleus	44.41	40.96
Os11t0120200-01	Rice	cytosol, mitochondrion, nucleus	44.26	40.82
TraesCS4B01G123300.1	Wheat	mitochondrion	43.19	40.17
TraesCS4A01G192100.1	Wheat	mitochondrion	43.03	39.69
HORVU4Hr1G024210.1	Barley	mitochondrion	42.88	39.38
TraesCS4D01G121400.1	Wheat	mitochondrion	42.88	38.78
EES09151	Sorghum	cytosol, mitochondrion, plastid	41.19	37.15
HORVU4Hr1G024120.1	Barley	plastid	42.88	36.94
Zm00001d052368_P001	Maize	cytosol, mitochondrion, plastid	40.58	36.25
Bra027368.1-P	Field mustard	mitochondrion	23.28	29.98
Bra031640.1-P	Field mustard	cytosol, nucleus, peroxisome	27.26	25.72
Bra018603.1-P	Field mustard	cytosol, nucleus, vacuole	28.48	25.27
Bra005615.1-P	Field mustard	plastid	20.52	24.5
Bra024618.1-P	Field mustard	nucleus	19.3	24.42
Bra016331.1-P	Field mustard	nucleus	19.75	24.07
Bra001755.1-P	Field mustard	nucleus	21.44	23.41

Protein Annotations

EnsemblPlants:Bra034878.1	EnsemblPlants:Bra034878.1-P	EnsemblPlantsGene:Bra034878	InterPro:DUF936_pln	PANTHER:PTHR31928	PANTHER:PTHR31928:SF3
PFAM:PF06075	SEG:seg	UniParc:UPI000254564A	UniProt:M4F1D2	MapMan:20.1.5.4.2	:

Description

AT4G13370 (E=8e-251) | unknown protein

Coordinates

chrA08:-:5787208..5789493

Molecular Weight (calculated)

71140.4 Da

IEP (calculated)

10.078

GRAVY (calculated)

-0.450

Length

653 amino acids

Sequence
(BLAST)

001: MASLAPGILL KLLQCMNSNT RPTGDHRSAI LQVTGIVPAL AGSDLWPNQG FYVQISDSLN STYVCLSERD TDLILTNRLQ LGQFIYLERL EFSTPVPRAA
101: GIRPVAGRHA FVGTPEPLIA RGSKRDFVIQ PVPASEYSLD PIAVYLNNKR SDDDDDDVTV APRGRQALAP VNLNDQKPKR TPQRFSSPAS AKQRSVSSGK
201: KHSSERDSSP VVSSKGRRSA SPVPSKCVVP SLAAAREENR KVAREAAIVV PSRYRQPSPN GRRLSISPGR RLSSGLKMAP MVGDSSGKKK MAALAAGISK
301: VSEALVGSSG NRKNWDGNVL PEQKEKSSAK KKTDLQGILR TQAAMTRRLS DANRRKSDSS ACEEKAKSCS SASSLVEDEE DVSAFAGLGI TYHDRKWTDG
401: RVPLDSISGD LARLAKEAVQ RRNFAAKAAA RALEEANANE CIIRCLSKFA ELSSASKLEN PLRIINQFLT IYGDVTKYSQ LVSEDSFQSS SDPPSPVSLW
501: VEAALATNLD VVSLVKSQKN LESPSSVKKP TPTRLSAGPS TKTDNIVGMW TDKDGMKETA KFAVNVQSEM QMWFIGFVEE SLDNKNARPL DGSSIAAVLS
601: QLKQVNEWLD RVVSDKENQI TTMHLTDKIE RLKRKIYGFV IHHVGSTFDN TAS

Best Arabidopsis Sequence Match ( AT4G13370.1 )
(BLAST)

001: MASLAPGILL KLLQCMNSGT RPTGDHRSAI LQVTGIVPAL AGSDLWPNQG FYVQISDSLN STYVSLSERD TDLILSNRLQ LGQFIYLERL EFATPVPRAA
101: GIRPVAGRHA FVGKPEPLIA RVSNGSKRDF VIQPVSDSEY SLDPIAVYLN NRRIDDDGDS DVKPNVRQAL APVNQNEENR NQIRNQKPKT TPQRFSSPAS
201: SKRSVSSGKK NCSGAVAVTV ERDPSPVVSG KGRRSASPVP SKCVVPSLAA AREENRKVAR EPSIVVPSRY RQPSPNGRKM NPSPSGRRMS ISPGRRLSSG
301: LKMTPMVGDS SGKKKMAVIA AGISKVSEAL VGSSAKNGNR KNWEEPLAGD GSAKNKPDHQ AILRTQAAMT RRLSDANRRK SGSSSSVCEE KAKSCSSESS
401: LLEEVSAFEG LGITYHERKW TDGSVPLDSI SDELAKLGKE AMKRRDFAAK AAARALEEAN ANECIIRCLS KFSELSSASK VGNPLRIINE FLKIYEDVMK
501: YSKIASENSF SLSSDQQNPI SLWVEAALAT NLEVVSLVKS HESPSSLKKS MPTRLSPRPS SKTDNIVGMW TDLDGLKETA KFAVNLQSEM QVWFIEFVEE
601: SLDNKNAAKR SLDGSSIAAV LSQLKQVNEW LDRVSSNQEN KITTMDKIER LKRKIYGFVI HHVGSTYDNS ASS

Arabidopsis Description

At4g13370 [Source:UniProtKB/TrEMBL;Acc:Q9T0K8]
SUBAcon: [mitochondrion,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.