CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052368_P001	Maize	cytosol, mitochondrion, plastid	86.88	86.05
Os11t0120200-01	Rice	cytosol, mitochondrion, nucleus	73.76	75.42
Os12t0120000-01	Rice	cytosol, mitochondrion, nucleus	73.34	75.0
TraesCS4B01G123300.1	Wheat	mitochondrion	72.24	74.5
TraesCS4A01G192100.1	Wheat	mitochondrion	72.51	74.15
TraesCS4D01G121400.1	Wheat	mitochondrion	72.79	72.99
HORVU4Hr1G024210.1	Barley	mitochondrion	71.41	72.71
HORVU4Hr1G024120.1	Barley	plastid	71.41	68.21
GSMUA_Achr7P21900_001	Banana	mitochondrion	48.9	51.45
GSMUA_Achr4P10330_001	Banana	mitochondrion	49.31	48.97
KRH03797	Soybean	mitochondrion	42.4	43.61
VIT_11s0016g04380.t01	Wine grape	plastid	42.68	43.52
Bra032701.1-P	Field mustard	mitochondrion	37.85	43.49
CDY01127	Canola	mitochondrion	37.71	43.33
PGSC0003DMT400001026	Potato	mitochondrion	40.88	43.02
AT4G13370.1	Thale cress	endoplasmic reticulum, mitochondrion	39.78	42.79
Solyc12g007020.1.1	Tomato	mitochondrion	40.47	42.77
CDY69222	Canola	mitochondrion, plastid	24.72	42.22
CDY64935	Canola	mitochondrion	37.71	41.74
Bra034878.1-P	Field mustard	mitochondrion	37.15	41.19
CDY43695	Canola	mitochondrion	37.57	40.96
KRH56681	Soybean	vacuole	42.27	37.23
EES14150	Sorghum	cytosol, plasma membrane, plastid	25.14	24.5
EER99187	Sorghum	cytosol, mitochondrion, nucleus	24.17	23.55
EER95393	Sorghum	cytosol	17.4	22.26
KXG36592	Sorghum	plastid	19.2	21.06
EES02630	Sorghum	cytosol, extracellular, mitochondrion, nucleus	16.16	20.49
KXG28276	Sorghum	plastid	13.4	19.68
OQU86510	Sorghum	cytosol	13.12	19.43

Protein Annotations

EnsemblPlants:EES09151	EnsemblPlantsGene:SORBI_3005G016300	EntrezGene:8083020	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008017
InterPro:DUF936_pln	PANTHER:PTHR31928	PANTHER:PTHR31928:SF3	PFAM:PF06075	ProteinID:EES09151	ProteinID:EES09151.2
RefSeq:XP_002450163.1	SEG:seg	UniParc:UPI000B426507	UniProt:C5Y3J8	MapMan:20.1.5.4.2	:

Description

hypothetical protein

Coordinates

chr5:-:1449038..1452734

Molecular Weight (calculated)

76945.6 Da

IEP (calculated)

10.443

GRAVY (calculated)

-0.329

Length

724 amino acids

Sequence
(BLAST)

001: MATVTQGVLL RLLHAMHTEE RVAGEHRSPV LQVTAVVPAL TASTSDSPLL AAPPSNGVLL NLSDGLHCTY VQVPPADADA LLAAARPQLV GHLVHLDRLR
101: FARPVPRAVG LRTVPSSRPL PCVGKPEPLV ARPAPCARGY VVQPAASPAD AAPPLMPSSS NCSSSASFTP DANDTAAVKR TVLGPKNAVA DPAPQHPVKR
201: RFSSPAPPSS KQRDPSPAAK HSAASRASSP SVGKSASRAS SPAVRGTPRA TSPAPSKCVV PSLVAAREEN RRVVREPAII VPSRYRQPSP AGGRRGAASP
301: AVGCGRRASL SPSSRRLSGE GTGKKKVGVL VAGISKMTDL GSGSAAKPGR KSWDDPTVSL GTAGAGSVMK SKAKVDKDSI LRTQEAMSRR LSDATMEHSS
401: NDDSSVDERP KHRKKIESTL VKAKTTAPKI ILHDPKWTDG SIQLDALPDK LSKIGKEAFE RRDLAATAAA SALQEALVSE SVIRNISKFS EICASSKVSN
501: PFPTVDLFLV VYEDTLKWKT IAESVVTNGA EEESFEKSTK HWVGAALATD LEVLKLLNGA TGSFSRTGST NKPNASSVEP PRTSLSKKPT HGVSAKVQSK
601: VSPSSPLRCT WSNTESMSET AELAKVLWRE MHTWFLTFVD EALDVGFHLF EDQNVASKGK HSSHITMVLS QFKKISDWLD QVGKIAEEER TKEKIECLKR
701: KIYGFVISHM GSAFESSVSV SSRS

Best Arabidopsis Sequence Match ( AT4G13370.1 )
(BLAST)

001: MASLAPGILL KLLQCMNSGT RPTGDHRSAI LQVTGIVPAL AGSDLWPNQG FYVQISDSLN STYVSLSERD TDLILSNRLQ LGQFIYLERL EFATPVPRAA
101: GIRPVAGRHA FVGKPEPLIA RVSNGSKRDF VIQPVSDSEY SLDPIAVYLN NRRIDDDGDS DVKPNVRQAL APVNQNEENR NQIRNQKPKT TPQRFSSPAS
201: SKRSVSSGKK NCSGAVAVTV ERDPSPVVSG KGRRSASPVP SKCVVPSLAA AREENRKVAR EPSIVVPSRY RQPSPNGRKM NPSPSGRRMS ISPGRRLSSG
301: LKMTPMVGDS SGKKKMAVIA AGISKVSEAL VGSSAKNGNR KNWEEPLAGD GSAKNKPDHQ AILRTQAAMT RRLSDANRRK SGSSSSVCEE KAKSCSSESS
401: LLEEVSAFEG LGITYHERKW TDGSVPLDSI SDELAKLGKE AMKRRDFAAK AAARALEEAN ANECIIRCLS KFSELSSASK VGNPLRIINE FLKIYEDVMK
501: YSKIASENSF SLSSDQQNPI SLWVEAALAT NLEVVSLVKS HESPSSLKKS MPTRLSPRPS SKTDNIVGMW TDLDGLKETA KFAVNLQSEM QVWFIEFVEE
601: SLDNKNAAKR SLDGSSIAAV LSQLKQVNEW LDRVSSNQEN KITTMDKIER LKRKIYGFVI HHVGSTYDNS ASS

Arabidopsis Description

At4g13370 [Source:UniProtKB/TrEMBL;Acc:Q9T0K8]
SUBAcon: [mitochondrion,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.