CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021181_P005	Maize	cytosol, mitochondrion, nucleus	93.41	93.28
Zm00001d006130_P001	Maize	mitochondrion, plastid	88.83	86.73
Os09t0516700-01	Rice	cytosol, extracellular, nucleus	50.87	81.64
TraesCS5D01G309900.1	Wheat	cytosol, mitochondrion, plastid	79.54	79.01
TraesCS5B01G303400.1	Wheat	cytosol, mitochondrion, plastid	79.27	78.43
HORVU5Hr1G079460.1	Barley	cytosol, mitochondrion, plastid	79.27	78.32
TraesCS5A01G303100.1	Wheat	cytosol, mitochondrion, plastid	78.47	77.63
EES14150	Sorghum	cytosol, plasma membrane, plastid	74.56	74.56
CDY05811	Canola	cytosol	11.31	65.12
CDX91320	Canola	extracellular	8.21	61.0
GSMUA_Achr11P...	Banana	cytosol, extracellular, nucleus	32.44	57.52
GSMUA_Achr5P25710_001	Banana	cytosol, plasma membrane, plastid	56.39	56.85
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	22.34	54.25
GSMUA_Achr3P21570_001	Banana	extracellular, peroxisome, plastid	53.84	53.91
CDY08643	Canola	mitochondrion, nucleus	8.75	52.85
GSMUA_Achr11P...	Banana	plastid	47.91	50.42
CDY22665	Canola	extracellular, nucleus, peroxisome	42.4	50.16
VIT_05s0102g01200.t01	Wine grape	endoplasmic reticulum, extracellular, nucleus	48.86	49.12
CDY06329	Canola	extracellular, nucleus, peroxisome	40.51	48.16
Solyc06g073110.2.1	Tomato	endoplasmic reticulum, extracellular, nucleus	47.11	46.85
KRH29601	Soybean	nucleus	46.43	46.5
KRH24591	Soybean	nucleus	46.3	46.36
Bra031640.1-P	Field mustard	cytosol, nucleus, peroxisome	42.66	45.81
CDX95036	Canola	extracellular, nucleus, vacuole	44.28	44.76
AT1G08760.1	Thale cress	cytosol, plastid, vacuole	44.95	44.65
Bra018603.1-P	Field mustard	cytosol, nucleus, vacuole	44.01	44.43
CDX93540	Canola	extracellular, nucleus, vacuole	43.88	44.29
KRH23226	Soybean	nucleus	44.55	43.9
CDY69908	Canola	plastid	6.86	43.22
KRH10106	Soybean	nucleus	44.41	42.86
EER95393	Sorghum	cytosol	22.75	29.86
KXG28276	Sorghum	plastid	19.52	29.41
EES02630	Sorghum	cytosol, extracellular, mitochondrion, nucleus	19.92	25.92
OQU86510	Sorghum	cytosol	16.02	24.34
KXG36592	Sorghum	plastid	21.53	24.24
EES09151	Sorghum	cytosol, mitochondrion, plastid	23.55	24.17

Protein Annotations

EnsemblPlants:EER99187	EnsemblPlantsGene:SORBI_3002G264500	EntrezGene:8063891	InterPro:DUF936_pln	PANTHER:PTHR31928	PANTHER:PTHR31928:SF11
PFAM:PF06075	ProteinID:EER99187	ProteinID:EER99187.1	RefSeq:XP_002462666.1	SEG:seg	UniParc:UPI0001A83C84
UniProt:C5X5E9	MapMan:20.1.5.4.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:64899118..64905470

Molecular Weight (calculated)

78009.3 Da

IEP (calculated)

10.325

GRAVY (calculated)

-0.412

Length

743 amino acids

Sequence
(BLAST)

001: MASLVPGVLV KLLQHMNTDV KVAGEHRSSL LQVVSIVPAL AGSDLFTNQG FYLKVSDSSH ATYVSLPEEQ HDLILSDKIQ LGQFIHVDRL EAATPVPILR
101: GVRPVPGRHA CVGTPEDLVV TSSSKFHGSK KAQPSNGMKD ASILSLEKET SKLEKINASR KPTGAENKKP MLTKSNSSLS RQALNGIGDK KEVVKSKVKP
201: AITRSTPSSP TSVYSLPASF DRFSNDLKQR NKVKGAEKAS SSRLSLLEKA ASVLKATSAG RKSSAGNSIS SSVLSIGSGP KALRRSWEGN TDIKGKGNSE
301: SKTAKPDRKS DNKIPMTPRR KSPVDEKVPH KDDSQKAARK STASAPSDDA DKAVKKHIPT VKRTSGVLGN SNVTNLVKVP PNSKKLTDIS TSWTSLPPSL
401: AKLGKEILKY RESAQIAAVE AMQEASAAES LLRCLSSYAE VSSTAEEQNP QAAVEQFLTL HAALSRATVI TDTLAKSATS ATSPDCSAAS DAGTVGSATD
501: EEAAAITAER RRRATSWVSA ALATDLSAFG IYNLKPVPTT VTSPLAVVVV DETAKPAVAA ATATKSSPSP KSRLSPAKGK ARTGTAAAAA ALTTTPAPPE
601: WERGGGAEER GELAKRLGQE SRGWFLGFVE RFLDADVAAS APWDRERAAR MLPQLKRVND WLGEIGKRSE TPSLPPADAD GEATTASTAP VPANGGCGVP
701: EETIERLRKK IYEYLLTNVD SAAAMLGGGG GGGAAAPTNG KKG

Best Arabidopsis Sequence Match ( AT1G08760.1 )
(BLAST)

001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR

Arabidopsis Description

At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.