CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91320	Canola	extracellular	42.64	55.0
CDY08643	Canola	mitochondrion, nucleus	47.29	49.59
CDY69908	Canola	plastid	32.56	35.59
GSMUA_Achr11P...	Banana	cytosol, extracellular, nucleus	71.32	21.96
Os09t0516700-01	Rice	cytosol, extracellular, nucleus	64.34	17.93
CDY06329	Canola	extracellular, nucleus, peroxisome	73.64	15.2
CDY22665	Canola	extracellular, nucleus, peroxisome	72.87	14.97
CDX95036	Canola	extracellular, nucleus, vacuole	79.84	14.01
AT1G08760.1	Thale cress	cytosol, plastid, vacuole	79.07	13.64
CDX93540	Canola	extracellular, nucleus, vacuole	75.19	13.18
CDX97548	Canola	mitochondrion	49.61	12.62
CDY69222	Canola	mitochondrion, plastid	41.09	12.5
Solyc06g073110.2.1	Tomato	endoplasmic reticulum, extracellular, nucleus	71.32	12.32
CDY52268	Canola	mitochondrion	48.06	12.23
GSMUA_Achr3P21570_001	Banana	extracellular, peroxisome, plastid	68.99	11.99
CDY61547	Canola	nucleus	46.51	11.76
GSMUA_Achr5P25710_001	Banana	cytosol, plasma membrane, plastid	66.67	11.67
Os08t0541500-01	Rice	mitochondrion, peroxisome, plastid	65.89	11.6
EES14150	Sorghum	cytosol, plasma membrane, plastid	66.67	11.57
GSMUA_Achr11P...	Banana	plastid	62.79	11.47
TraesCS7B01G166200.1	Wheat	cytosol, mitochondrion, plastid	65.12	11.46
TraesCS7D01G268500.2	Wheat	cytosol, mitochondrion, nucleus	65.12	11.46
TraesCS7A01G266300.1	Wheat	cytosol, mitochondrion, plastid	65.12	11.43
EER99187	Sorghum	cytosol, mitochondrion, nucleus	65.12	11.31
Zm00001d031700_P003	Maize	cytosol, mitochondrion, plastid	65.12	11.26
CDY47633	Canola	nucleus	44.96	11.2
Zm00001d021181_P005	Maize	cytosol, mitochondrion, nucleus	64.34	11.16
TraesCS5D01G309900.1	Wheat	cytosol, mitochondrion, plastid	62.79	10.83
TraesCS5B01G303400.1	Wheat	cytosol, mitochondrion, plastid	62.79	10.79
TraesCS5A01G303100.1	Wheat	cytosol, mitochondrion, plastid	62.79	10.79
HORVU5Hr1G079460.1	Barley	cytosol, mitochondrion, plastid	62.79	10.77
CDY57317	Canola	nucleus	44.96	10.58
CDX91723	Canola	nucleus	42.64	10.3
Zm00001d006130_P001	Maize	mitochondrion, plastid	60.47	10.25
CDY64935	Canola	mitochondrion	40.31	7.95
GSMUA_Achr9P08220_001	Banana	mitochondrion	63.57	7.64
CDY43695	Canola	mitochondrion	38.76	7.53
CDX82287	Canola	endoplasmic reticulum	36.43	7.47
CDY01127	Canola	mitochondrion	36.43	7.46
CDY22966	Canola	endoplasmic reticulum	35.66	7.3
CDY42075	Canola	plastid	29.46	6.95
CDY60513	Canola	plastid	28.68	6.83
KXG28276	Sorghum	plastid	11.63	3.04
TraesCS4A01G231900.1	Wheat	nucleus, plastid	9.3	2.68
TraesCS4B01G084100.1	Wheat	nucleus, plastid	9.3	2.58
TraesCS4D01G082000.1	Wheat	nucleus, plastid	9.3	2.56
HORVU4Hr1G014370.1	Barley	nucleus, plastid	8.53	2.36
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:CDY05811	EnsemblPlantsGene:GSBRNA2T00120919001	InterPro:DUF936_pln	PANTHER:PTHR31928	PANTHER:PTHR31928:SF4	PFAM:PF06075
ProteinID:CDY05811	ProteinID:CDY05811.1	SEG:seg	UniParc:UPI0004EED57A	MapMan:20.1.5.4.2	:

Description

BnaA10g06090D

Coordinates

chrLK031965:+:185265..185654

Molecular Weight (calculated)

14168.3 Da

IEP (calculated)

6.882

GRAVY (calculated)

0.153

Length

129 amino acids

Sequence
(BLAST)

001: MANLVPDVLL KHMNTDVKIA GEHMSSLLQV VSIVPALAGG ELFPNQGFYL KVSDSSHATY VSLPDEHDDL ILSDKLHLGQ FIHVDRVESS SPLPILCGRQ
101: SQSLIHLRAV TRCLLLLQSL RMGLRSNST

Best Arabidopsis Sequence Match ( AT1G08760.1 )
(BLAST)

001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR

Arabidopsis Description

At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.