CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
plastid 2
peroxisome 1
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69908	Canola	plastid	87.0	73.73
CDY08643	Canola	mitochondrion, nucleus	53.0	43.09
CDY05811	Canola	cytosol	55.0	42.64
GSMUA_Achr11P...	Banana	cytosol, extracellular, nucleus	63.0	15.04
CDY06329	Canola	extracellular, nucleus, peroxisome	81.0	12.96
Os09t0516700-01	Rice	cytosol, extracellular, nucleus	59.0	12.74
CDY22665	Canola	extracellular, nucleus, peroxisome	78.0	12.42
CDX93540	Canola	extracellular, nucleus, vacuole	87.0	11.82
CDX95036	Canola	extracellular, nucleus, vacuole	80.0	10.88
VIT_05s0102g01200.t01	Wine grape	endoplasmic reticulum, extracellular, nucleus	73.0	9.88
KRH24591	Soybean	nucleus	71.0	9.57
KRH29601	Soybean	nucleus	70.0	9.43
KRH23226	Soybean	nucleus	70.0	9.28
Solyc06g073110.2.1	Tomato	endoplasmic reticulum, extracellular, nucleus	69.0	9.24
KRH10106	Soybean	nucleus	71.0	9.22
CDY69222	Canola	mitochondrion, plastid	39.0	9.2
GSMUA_Achr11P...	Banana	plastid	59.0	8.36
GSMUA_Achr3P21570_001	Banana	extracellular, peroxisome, plastid	61.0	8.22
EER99187	Sorghum	cytosol, mitochondrion, nucleus	61.0	8.21
GSMUA_Achr5P25710_001	Banana	cytosol, plasma membrane, plastid	60.0	8.14
Zm00001d021181_P005	Maize	cytosol, mitochondrion, nucleus	60.0	8.06
Os08t0541500-01	Rice	mitochondrion, peroxisome, plastid	59.0	8.05
TraesCS5D01G309900.1	Wheat	cytosol, mitochondrion, plastid	60.0	8.02
TraesCS5A01G303100.1	Wheat	cytosol, mitochondrion, plastid	60.0	7.99
TraesCS5B01G303400.1	Wheat	cytosol, mitochondrion, plastid	60.0	7.99
HORVU5Hr1G079460.1	Barley	cytosol, mitochondrion, plastid	60.0	7.98
EES14150	Sorghum	cytosol, plasma membrane, plastid	59.0	7.94
Zm00001d031700_P003	Maize	cytosol, mitochondrion, plastid	59.0	7.91
CDX97548	Canola	mitochondrion	39.0	7.69
CDY52268	Canola	mitochondrion	39.0	7.69
CDY61547	Canola	nucleus	39.0	7.65
TraesCS7D01G268500.2	Wheat	cytosol, mitochondrion, nucleus	56.0	7.64
TraesCS7A01G266300.1	Wheat	cytosol, mitochondrion, plastid	56.0	7.62
TraesCS7B01G166200.1	Wheat	cytosol, mitochondrion, plastid	55.0	7.5
Zm00001d006130_P001	Maize	mitochondrion, plastid	57.0	7.49
CDY47633	Canola	nucleus	38.0	7.34
CDY57317	Canola	nucleus	37.0	6.75
CDX91723	Canola	nucleus	35.0	6.55
CDY64935	Canola	mitochondrion	39.0	5.96
CDX82287	Canola	endoplasmic reticulum	36.0	5.72
CDY43695	Canola	mitochondrion	38.0	5.72
CDY22966	Canola	endoplasmic reticulum	36.0	5.71
GSMUA_Achr9P08220_001	Banana	mitochondrion	60.0	5.59
CDY60513	Canola	plastid	28.0	5.17
CDY42075	Canola	plastid	28.0	5.12
CDY01127	Canola	mitochondrion	32.0	5.08
KXG28276	Sorghum	plastid	14.0	2.84
TraesCS4D01G082000.1	Wheat	nucleus, plastid	12.0	2.56
TraesCS4B01G084100.1	Wheat	nucleus, plastid	11.0	2.37
HORVU4Hr1G014370.1	Barley	nucleus, plastid	11.0	2.36
TraesCS4A01G231900.1	Wheat	nucleus, plastid	10.0	2.24
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:CDX91320	EnsemblPlantsGene:GSBRNA2T00152587001	InterPro:DUF936_pln	PANTHER:PTHR31928	PANTHER:PTHR31928:SF4	PFAM:PF06075
ProteinID:CDX91320	ProteinID:CDX91320.1	UniParc:UPI0004EE6DBF	MapMan:20.1.5.4.2	:	:

Description

BnaC02g27310D

Coordinates

chrLK031866:-:1483649..1484124

Molecular Weight (calculated)

10913.2 Da

IEP (calculated)

9.025

GRAVY (calculated)

-0.183

Length

100 amino acids

Sequence
(BLAST)

1: MSSLLQVVSI VPALAGGELF PNQGFYLKVS DSSHATYVSL PDEHDDLILS DKLHLERGRS PLGMESPTVG KKLPMNKSFV HGIEFGAKAL RKLGREHSKV

Best Arabidopsis Sequence Match ( AT1G08760.1 )
(BLAST)

001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR

Arabidopsis Description

At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.