CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, extracellular, nucleus

Predictor Summary:

nucleus 2
extracellular 1
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, nucleus, vacuole
Any Predictor:	extracellular, nucleus, vacuole
BaCelLo:	nucleus
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018603.1-P	Field mustard	cytosol, nucleus, vacuole	99.86	99.86
CDX95036	Canola	extracellular, nucleus, vacuole	93.75	93.88
CDX91320	Canola	extracellular	11.82	87.0
CDY06329	Canola	extracellular, nucleus, peroxisome	73.1	86.08
CDY22665	Canola	extracellular, nucleus, peroxisome	72.42	84.87
AT1G08760.1	Thale cress	cytosol, plastid, vacuole	82.34	81.02
CDY05811	Canola	cytosol	13.18	75.19
CDY69908	Canola	plastid	10.6	66.1
CDY08643	Canola	mitochondrion, nucleus	10.19	60.98
Solyc06g073110.2.1	Tomato	endoplasmic reticulum, extracellular, nucleus	57.34	56.49
GSMUA_Achr11P...	Banana	cytosol, extracellular, nucleus	27.31	47.97
Os09t0516700-01	Rice	cytosol, extracellular, nucleus	28.94	46.0
GSMUA_Achr5P25710_001	Banana	cytosol, plasma membrane, plastid	44.84	44.78
GSMUA_Achr3P21570_001	Banana	extracellular, peroxisome, plastid	44.57	44.2
EER99187	Sorghum	cytosol, mitochondrion, nucleus	44.29	43.88
TraesCS7D01G268500.2	Wheat	cytosol, mitochondrion, nucleus	42.93	43.11
TraesCS7A01G266300.1	Wheat	cytosol, mitochondrion, plastid	42.8	42.86
TraesCS7B01G166200.1	Wheat	cytosol, mitochondrion, plastid	42.66	42.84
Os08t0541500-01	Rice	mitochondrion, peroxisome, plastid	42.66	42.84
EES14150	Sorghum	cytosol, plasma membrane, plastid	43.21	42.8
Zm00001d031700_P003	Maize	cytosol, mitochondrion, plastid	43.07	42.49
Zm00001d021181_P005	Maize	cytosol, mitochondrion, nucleus	42.8	42.34
GSMUA_Achr11P...	Banana	plastid	40.49	42.21
HORVU5Hr1G079460.1	Barley	cytosol, mitochondrion, plastid	42.66	41.76
TraesCS5D01G309900.1	Wheat	cytosol, mitochondrion, plastid	42.26	41.58
TraesCS5B01G303400.1	Wheat	cytosol, mitochondrion, plastid	42.39	41.54
Zm00001d006130_P001	Maize	mitochondrion, plastid	42.8	41.39
TraesCS5A01G303100.1	Wheat	cytosol, mitochondrion, plastid	41.98	41.15
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	16.58	39.87
CDX97548	Canola	mitochondrion	24.05	34.91
CDY52268	Canola	mitochondrion	23.91	34.71
CDY61547	Canola	nucleus	21.06	30.39
CDY47633	Canola	nucleus	20.92	29.73
CDY60513	Canola	plastid	21.88	29.7
CDX91723	Canola	nucleus	21.33	29.4
CDY42075	Canola	plastid	21.47	28.88
CDY57317	Canola	nucleus	21.33	28.65
CDY64935	Canola	mitochondrion	25.14	28.29
CDY01127	Canola	mitochondrion	24.05	28.1
GSMUA_Achr9P08220_001	Banana	mitochondrion	40.9	28.03
CDY43695	Canola	mitochondrion	25.27	28.01
KXG28276	Sorghum	plastid	18.48	27.59
TraesCS4D01G082000.1	Wheat	nucleus, plastid	17.53	27.56
HORVU4Hr1G014370.1	Barley	nucleus, plastid	17.39	27.47
CDY69222	Canola	mitochondrion, plastid	15.76	27.36
TraesCS4B01G084100.1	Wheat	nucleus, plastid	17.26	27.31
TraesCS4A01G231900.1	Wheat	nucleus, plastid	16.58	27.29
CDX82287	Canola	endoplasmic reticulum	20.79	24.32
CDY22966	Canola	endoplasmic reticulum	20.79	24.29

Protein Annotations

EnsemblPlants:CDX93540	EnsemblPlantsGene:GSBRNA2T00156216001	InterPro:DUF936_pln	PANTHER:PTHR31928	PANTHER:PTHR31928:SF4	PFAM:PF06075
ProteinID:CDX93540	ProteinID:CDX93540.1	SEG:seg	UniParc:UPI0004EF3AD8	MapMan:20.1.5.4.2	:

Description

BnaA06g05080D

Coordinates

chrLK031876:-:623233..625969

Molecular Weight (calculated)

78934.7 Da

IEP (calculated)

10.187

GRAVY (calculated)

-0.490

Length

736 amino acids

Sequence
(BLAST)

001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKLQ LGQFIHVDRV ESSSPVPILR
101: GVRPVPGRHP CLGTPEDIVA ADALGFLSDS CNGSKPKERA KEASKGGNEV ANRVSVSVSK DEASVSKKPS ALVRAKSAKT SLVLDVKKEA LGKVKVKTSS
201: STSGGGSKSI PSSPTSCYSL PSSFAKFADG VKQHQQQHVK KTVLSERGRS PLRVESPSVG KKLPMIKNFV QGIEFGAKAL RKSWEGNLDI RSSDRERLKL
301: AKRDSTPDSR SLTGPRKSTS SEKLPSKQER ANVLAKSSKE QSSKTQSTKK VETAGVVDTK EKTSKPKSTS VGKKSTAENG LPGNLVKVPV NSKRLASATV
401: QWGALPSSLS RLGQEVLRHR DAAQVVAIEA MQEASASESL LQCLIMYNDL MSAAKEDDPL PVVEQFLKLH SGLKNVQITT ESLSKLMSST SSPENEENKS
501: EEAIKAAAEK QKLAASWVQA ALVTNLSAFS VYSTKPTKSA ASKNKPVIIL ESPGNNSTNK PRGNVQTRPT IGSKLVAQGM IRKHRENSSS QKANTLAAAG
601: SESPPLNWVK GNGLNEATDL AEKLQTVSQD WFLGFVERFL DADVVETSSN LSDNGQIAGM LSQLKSVNDW LDEIGSKEDD EGLQEVSKET IDRLRKKIYE
701: YLLTHVESAA AALGGSGNGG GVSSPRPKPI ETKSKR

Best Arabidopsis Sequence Match ( AT1G08760.1 )
(BLAST)

001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR

Arabidopsis Description

At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.