Factsheet for Bra018603.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93540	Canola	extracellular, nucleus, vacuole	99.86	99.86
Bra031640.1-P	Field mustard	cytosol, nucleus, peroxisome	80.43	85.55
AT1G08760.1	Thale cress	cytosol, plastid, vacuole	82.47	81.15
VIT_05s0102g01200.t01	Wine grape	endoplasmic reticulum, extracellular, nucleus	56.93	56.7
Solyc06g073110.2.1	Tomato	endoplasmic reticulum, extracellular, nucleus	57.47	56.63
KRH29601	Soybean	nucleus	54.62	54.18
KRH24591	Soybean	nucleus	54.08	53.64
KRH23226	Soybean	nucleus	54.48	53.18
KRH10106	Soybean	nucleus	54.35	51.95
GSMUA_Achr11P...	Banana	cytosol, extracellular, nucleus	27.45	48.21
Os09t0516700-01	Rice	cytosol, extracellular, nucleus	29.08	46.22
GSMUA_Achr5P25710_001	Banana	cytosol, plasma membrane, plastid	44.97	44.91
GSMUA_Achr3P21570_001	Banana	extracellular, peroxisome, plastid	44.57	44.2
EER99187	Sorghum	cytosol, mitochondrion, nucleus	44.43	44.01
TraesCS7D01G268500.2	Wheat	cytosol, mitochondrion, nucleus	43.07	43.25
TraesCS7A01G266300.1	Wheat	cytosol, mitochondrion, plastid	42.93	42.99
Os08t0541500-01	Rice	mitochondrion, peroxisome, plastid	42.8	42.97
TraesCS7B01G166200.1	Wheat	cytosol, mitochondrion, plastid	42.8	42.97
EES14150	Sorghum	cytosol, plasma membrane, plastid	43.34	42.93
Zm00001d031700_P003	Maize	cytosol, mitochondrion, plastid	43.07	42.49
Zm00001d021181_P005	Maize	cytosol, mitochondrion, nucleus	42.93	42.47
GSMUA_Achr11P...	Banana	plastid	40.62	42.35
HORVU5Hr1G079460.1	Barley	cytosol, mitochondrion, plastid	42.66	41.76
TraesCS5D01G309900.1	Wheat	cytosol, mitochondrion, plastid	42.26	41.58
TraesCS5B01G303400.1	Wheat	cytosol, mitochondrion, plastid	42.39	41.54
Zm00001d006130_P001	Maize	mitochondrion, plastid	42.93	41.52
TraesCS5A01G303100.1	Wheat	cytosol, mitochondrion, plastid	41.98	41.15
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	16.58	39.87
Bra027368.1-P	Field mustard	mitochondrion	23.64	34.32
Bra024618.1-P	Field mustard	nucleus	21.06	30.04
Bra016331.1-P	Field mustard	nucleus	21.06	28.92
Bra032701.1-P	Field mustard	mitochondrion	24.59	28.73
Bra005615.1-P	Field mustard	plastid	21.33	28.7
Bra034878.1-P	Field mustard	mitochondrion	25.27	28.48
GSMUA_Achr9P08220_001	Banana	mitochondrion	40.9	28.03
KXG28276	Sorghum	plastid	18.48	27.59
TraesCS4D01G082000.1	Wheat	nucleus, plastid	17.53	27.56
HORVU4Hr1G014370.1	Barley	nucleus, plastid	17.39	27.47
TraesCS4B01G084100.1	Wheat	nucleus, plastid	17.26	27.31
TraesCS4A01G231900.1	Wheat	nucleus, plastid	16.58	27.29
Bra001755.1-P	Field mustard	nucleus	20.92	25.75

Protein Annotations

EnsemblPlants:Bra018603.1	EnsemblPlants:Bra018603.1-P	EnsemblPlantsGene:Bra018603	InterPro:DUF936_pln	PANTHER:PTHR31928	PANTHER:PTHR31928:SF4
PFAM:PF06075	SEG:seg	UniParc:UPI000253E7A6	UniProt:M4DQ12	MapMan:20.1.5.4.2	:

Description

AT1G08760 (E=7e-272) | unknown protein

Coordinates

chrA06:+:3034044..3036780

Molecular Weight (calculated)

78933.8 Da

IEP (calculated)

10.219

GRAVY (calculated)

-0.490

Length

736 amino acids

Sequence
(BLAST)

001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKLQ LGQFIHVDRV ESSSPVPILR
101: GVRPVPGRHP CLGTPEDIVA ADALGFLSDS CNGSKPKERA KEASKGGNEV ANRVSVSVSK DEASVSKKPS ALVRAKSAKT SLVLDVKKEA LGKVKVKTSS
201: STSGGGSKSI PSSPTSCYSL PSSFAKFANG VKQHQQQHVK KTVLSERGRS PLRVESPSVG KKLPMIKNFV QGIEFGAKAL RKSWEGNLDI RSSDRERLKL
301: AKRDSTPDSR SLTGPRKSTS SEKLPSKQER ANVLAKSSKE QSSKTQSTKK VETAGVVDTK EKTSKPKSTS VGKKSTAENG LPGNLVKVPV NSKRLASATV
401: QWGALPSSLS RLGQEVLRHR DAAQVVAIEA MQEASASESL LQCLIMYNDL MSAAKEDDPL PVVEQFLKLH SGLKNVQITT ESLSKLMSST SSPENEENKS
501: EEAIKAAAEK QKLAASWVQA ALVTNLSAFS VYSTKPTKSA ASKNKPVIIL ESPGNNSTNK PRGNVQTRPT IGSKLVAQGM IRKHRENSSS QKANTLAAAG
601: SESPPLNWVK GNGLNEATDL AEKLQTVSQD WFLGFVERFL DADVVETSSN LSDNGQIAGM LSQLKSVNDW LDEIGSKEDD EGLQEVSKET IDRLRKKIYE
701: YLLTHVESAA AALGGSGNGG GVSSPRPKPI ETKSKR

Best Arabidopsis Sequence Match ( AT1G08760.1 )
(BLAST)

001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR

Arabidopsis Description

At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.