Factsheet for GSMUA_Achr3P21570_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, extracellular

Predictor Summary:

nucleus 2
plastid 2
extracellular 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P25710_001	Banana	cytosol, plasma membrane, plastid	73.85	74.36
CDY05811	Canola	cytosol	11.99	68.99
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	28.44	68.95
GSMUA_Achr11P...	Banana	plastid	63.75	67.0
GSMUA_Achr11P...	Banana	cytosol, extracellular, nucleus	37.33	66.11
CDX91320	Canola	extracellular	8.22	61.0
Os09t0516700-01	Rice	cytosol, extracellular, nucleus	35.18	56.37
Os08t0541500-01	Rice	mitochondrion, peroxisome, plastid	54.72	55.39
EES14150	Sorghum	cytosol, plasma membrane, plastid	55.26	55.18
Zm00001d031700_P003	Maize	cytosol, mitochondrion, plastid	54.85	54.56
TraesCS7D01G268500.2	Wheat	cytosol, mitochondrion, nucleus	53.37	54.02
TraesCS7B01G166200.1	Wheat	cytosol, mitochondrion, plastid	53.23	53.89
EER99187	Sorghum	cytosol, mitochondrion, nucleus	53.91	53.84
CDY08643	Canola	mitochondrion, nucleus	8.89	53.66
TraesCS7A01G266300.1	Wheat	cytosol, mitochondrion, plastid	52.97	53.47
Zm00001d021181_P005	Maize	cytosol, mitochondrion, nucleus	52.83	52.69
TraesCS5D01G309900.1	Wheat	cytosol, mitochondrion, plastid	52.97	52.54
TraesCS5B01G303400.1	Wheat	cytosol, mitochondrion, plastid	53.1	52.46
HORVU5Hr1G079460.1	Barley	cytosol, mitochondrion, plastid	52.7	51.99
TraesCS5A01G303100.1	Wheat	cytosol, mitochondrion, plastid	52.43	51.8
Zm00001d006130_P001	Maize	mitochondrion, plastid	52.7	51.38
VIT_05s0102g01200.t01	Wine grape	endoplasmic reticulum, extracellular, nucleus	49.87	50.07
CDY22665	Canola	extracellular, nucleus, peroxisome	41.37	48.89
Solyc06g073110.2.1	Tomato	endoplasmic reticulum, extracellular, nucleus	48.92	48.59
KRH29601	Soybean	nucleus	47.44	47.44
KRH24591	Soybean	nucleus	47.03	47.03
CDY06329	Canola	extracellular, nucleus, peroxisome	39.35	46.72
KRH23226	Soybean	nucleus	46.5	45.76
KRH10106	Soybean	nucleus	47.17	45.45
AT1G08760.1	Thale cress	cytosol, plastid, vacuole	45.55	45.19
CDX95036	Canola	extracellular, nucleus, vacuole	44.61	45.03
Bra031640.1-P	Field mustard	cytosol, nucleus, peroxisome	41.64	44.65
Bra018603.1-P	Field mustard	cytosol, nucleus, vacuole	44.2	44.57
CDX93540	Canola	extracellular, nucleus, vacuole	44.2	44.57
CDY69908	Canola	plastid	6.87	43.22
GSMUA_Achr1P21840_001	Banana	extracellular	25.47	35.33
GSMUA_Achr9P08220_001	Banana	mitochondrion	48.79	33.71
GSMUA_Achr4P03420_001	Banana	cytosol	25.07	31.42
GSMUA_Achr4P10950_001	Banana	cytosol, mitochondrion, nucleus	24.26	30.77
GSMUA_Achr7P21900_001	Banana	mitochondrion	27.63	29.8
GSMUA_Achr8P14440_001	Banana	mitochondrion	20.49	29.57
GSMUA_Achr4P10330_001	Banana	mitochondrion	28.44	28.94
GSMUA_Achr9P00810_001	Banana	cytosol, mitochondrion, nucleus	20.22	26.6

Protein Annotations

EnsemblPlants:GSMUA_Achr3P21570_001	EnsemblPlants:GSMUA_Achr3T21570_001	EnsemblPlantsGene:GSMUA_Achr3G21570_001	InterPro:DUF936_pln	PANTHER:PTHR31928	PANTHER:PTHR31928:SF11
PFAM:PF06075	SEG:seg	UniParc:UPI0002966366	UniProt:M0SGM3	MapMan:20.1.5.4.2	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G21570_001]

Coordinates

chr3:-:22522263..22527031

Molecular Weight (calculated)

79632.0 Da

IEP (calculated)

9.671

GRAVY (calculated)

-0.370

Length

742 amino acids

Sequence
(BLAST)

001: MASLVPGVLI KLLQHMNTDV KIAGEHRSSL LQVVSIVPAL AGSDLFTNRG FYLKVSDSSH ATYVSLPDEH NDLILSDQIQ LGQFIHVDCL EAGSPVPILK
101: GARPLPGRHP CVGNPEDLVA TSSLGFLNPE KPKSSNYSKH NSNKSSENDR SKLGNSKLPI KMQEVEKKRA SLSRSSSLLS KQLVTGKLEK KVSISVRSKS
201: MHLRSMPSSP TSVYSLPGSF EMFSSEIKKQ AQAKRLEKPT LSRVGLLEKA ASVLKVTSAG RKSSARSLQG NMVPSIGLVP KALRKSWEGN VEVKRRGSSI
301: TKIAKLEMRT ESRSASAPRQ RSSMNEKLLL KEDCKIQSPV NKDITSAAED DSEKSAKHKT SVVKKSPKSC NSLNLANLVK VVPTNRKWTD GSISWASLPS
401: SLVKLGKELL KYKDAAQLAA VEAIQEASAS ESLIRCLSMY AELSTCAKEE RPQSAVEQFL ALHASLCSAT AVADSLSKTI PASPKVSSPD APSVGDQIPE
501: EALRVSAKNR RRAASWVGAA LATDLSPFSL YNRRTSADSI VSPSVVVLDG PAKTSAAAAA PSKACHQSKP RPCPASSSAA KGRARGAAPP SPPPEWERGV
601: GMEDGAELAR QLREEAHSWF LGFVERFLDA DAAAPGPSDR EQVAAMLSQL KKVNDWLEAI GHRRREGEAE ADAEVDEAEH GEGPGGGVPV ETIDRLRKKI
701: YEYLLTHVES AAVALGGGVQ PSPLDGGRPV HCDLIVEYCE LS

Best Arabidopsis Sequence Match ( AT1G08760.1 )
(BLAST)

001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR

Arabidopsis Description

At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.