Factsheet for GSMUA_Achr1P21840_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89920	Soybean	extracellular, mitochondrion	21.31	61.62
Zm00001d032126_P001	Maize	cytosol	24.3	55.56
Zm00001d038770_P001	Maize	cytosol	24.49	52.4
Zm00001d027907_P002	Maize	cytosol, mitochondrion, nucleus, peroxisome	33.27	48.77
VIT_09s0002g00760.t01	Wine grape	mitochondrion	48.04	48.58
EER95393	Sorghum	cytosol	49.72	47.0
Os03t0181800-01	Rice	cytosol	48.04	44.85
CDY52268	Canola	mitochondrion	42.24	44.58
PGSC0003DMT400074262	Potato	cytosol	42.99	44.23
Bra027368.1-P	Field mustard	mitochondrion	41.87	44.18
CDX97548	Canola	mitochondrion	41.87	44.18
AT3G14170.2	Thale cress	cytosol, golgi, mitochondrion, nucleus	41.31	43.68
HORVU4Hr1G077070.1	Barley	cytosol	47.66	43.22
TraesCS4A01G006800.1	Wheat	cytosol	47.48	43.05
KRH47653	Soybean	endoplasmic reticulum, nucleus, peroxisome	42.99	42.99
TraesCS4D01G297000.1	Wheat	cytosol	47.29	42.88
TraesCS4B01G298200.1	Wheat	cytosol	47.29	42.88
KRH69022	Soybean	golgi, mitochondrion	43.18	42.62
Solyc12g049500.1.1	Tomato	cytosol	40.19	42.32
PGSC0003DMT400058976	Potato	mitochondrion	40.75	42.08
Solyc03g122080.2.1	Tomato	mitochondrion	40.75	42.08
Zm00001d017634_P001	Maize	cytosol	19.44	41.77
KRH06232	Soybean	nucleus	41.5	41.57
Zm00001d012110_P001	Maize	nucleus	16.26	35.22
GSMUA_Achr11P...	Banana	cytosol, extracellular, nucleus	20.93	26.73
GSMUA_Achr3P21570_001	Banana	extracellular, peroxisome, plastid	35.33	25.47
GSMUA_Achr5P25710_001	Banana	cytosol, plasma membrane, plastid	34.58	25.1
GSMUA_Achr8P14440_001	Banana	mitochondrion	22.99	23.93
GSMUA_Achr11P...	Banana	plastid	31.03	23.51
GSMUA_Achr7P21900_001	Banana	mitochondrion	29.53	22.97
GSMUA_Achr4P10950_001	Banana	cytosol, mitochondrion, nucleus	23.93	21.88
GSMUA_Achr4P10330_001	Banana	mitochondrion	28.97	21.26
GSMUA_Achr9P00810_001	Banana	cytosol, mitochondrion, nucleus	22.06	20.92
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	11.78	20.59
GSMUA_Achr4P03420_001	Banana	cytosol	22.24	20.1
GSMUA_Achr9P08220_001	Banana	mitochondrion	33.64	16.76

Protein Annotations

EnsemblPlants:GSMUA_Achr1P21840_001	EnsemblPlants:GSMUA_Achr1T21840_001	EnsemblPlantsGene:GSMUA_Achr1G21840_001	InterPro:DUF936_pln	PANTHER:PTHR31928	PANTHER:PTHR31928:SF2
PFAM:PF06075	SEG:seg	UniParc:UPI00029486C4	UniProt:M0S1Z2	MapMan:20.1.5.4.2	:

Description

Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G21840_001]

Coordinates

chr1:-:16385105..16388780

Molecular Weight (calculated)

59178.1 Da

IEP (calculated)

9.696

GRAVY (calculated)

-0.421

Length

535 amino acids

Sequence
(BLAST)

001: MASLTPGVLI KLLKNLNTDI KICGEYRSVL LQVISIVPAL TGSELWPDHG FFIKVSDSSH STYVSLSKDD NDLILMNKLQ LGQFIYIDKV EAGTPVPVLV
101: GVRPVPGRNP CIGNPKDLMN MLVFSDASDT ADHLKNTSRS YELFEGEKES PKHRVDIKEE KNVVASRYMQ GVLRSNVKSS GSESYSINDK IEENSSVIEP
201: EKKTIPSRVK HETKRQVLQP KPTIPCIQNK TVNEKQENYV ATLKDDAKPL KNMSVKSNPI IKKMSSSNTM SSSLSSNKRR VADAIPWDSL PASLINPGKG
301: MVKRKEIAFL VAAEAQREAA TAAALVKGLS IFADLRKSSM EEKLHVSLAK FFSLHQLLNQ PNIAIEKDNL TGIPKQLAQE GEKLIMKTAL PNSRRVLNAP
401: NPAEASCGNE KITWSRGDGL KEIQELRANL RQESRSWFLS FLENALNSGF YAESRTKKGV KDRSGGHSKE SDELIAVTLS QLKDASTWLD QLRKDAGTEA
501: DGLLGTIDRL KQKIYVCLLE HVESAASALE VRKKS

Best Arabidopsis Sequence Match ( AT3G14170.1 )
(BLAST)

001: MASLTPRVLI KLLETMNTNI KVRGEYRSVL LQVISIVPAL AGSELWPNQG FFIKVSDSSH STYVSLSNED NELILNNKLG IGQFFYVDKL DAGTPVPVLV
101: GVRPISGRHP FVGNPKDLMQ MLVPSETTPR EEEYHNQKKK DGARSNIVEN IRKHQPFVIK EEKTGVASRY MKGISNSKAS GSDSSSGGSN NEGETGSIMV
201: AKKVGVLAKG KQREHKDQAR QAGPLQCRPA TAPTKAEPKK LSLSSTVNYI NRKSNSAEDA SWSSLPVSLS KLGKGMLRRR NLAALIAAEV QREALAASHL
301: IKCISMFAEL SSNASPKNPH TSLRNFFTLQ SILDQVQVTV VASKDKSFQP VNIHSLWMEP EKLSKKASLS SSRATMKPSK ALTEAEKLEW VKGNGTEEIK
401: ELTNTLKRET RSWFLKFLED ALDTGLHATV PEKKGKTKGA RLAEPDNHIA ETLSQLKQAN EWLEKVKNDN LSSDNSLLEN IERLKKKIYS CLLLYVDSAA
501: SAIGV

Arabidopsis Description

Plant protein of unknown function (DUF936) [Source:TAIR;Acc:AT3G14170]
SUBAcon: [mitochondrion,golgi,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.