CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular

Predictor Summary:

plastid 3
mitochondrion 3
extracellular 3
nucleus 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	nucleus, plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032126_P001	Maize	cytosol	57.84	45.73
Zm00001d038770_P001	Maize	cytosol	57.84	42.8
Zm00001d017634_P001	Maize	cytosol	46.49	34.54
KRH69022	Soybean	golgi, mitochondrion	92.97	31.73
Zm00001d027907_P002	Maize	cytosol, mitochondrion, nucleus, peroxisome	61.62	31.23
KRH06232	Soybean	nucleus	78.38	27.15
KRH47653	Soybean	endoplasmic reticulum, nucleus, peroxisome	77.3	26.73
Zm00001d012110_P001	Maize	nucleus	32.97	24.7
Bra027368.1-P	Field mustard	mitochondrion	64.32	23.47
CDY52268	Canola	mitochondrion	64.32	23.47
CDX97548	Canola	mitochondrion	63.78	23.27
AT3G14170.2	Thale cress	cytosol, golgi, mitochondrion, nucleus	62.16	22.73
GSMUA_Achr1P21840_001	Banana	extracellular	61.62	21.31
EER95393	Sorghum	cytosol	61.62	20.14
Os03t0181800-01	Rice	cytosol	61.08	19.72
HORVU4Hr1G077070.1	Barley	cytosol	60.0	18.81
TraesCS4D01G297000.1	Wheat	cytosol	58.92	18.47
TraesCS4A01G006800.1	Wheat	cytosol	58.92	18.47
TraesCS4B01G298200.1	Wheat	cytosol	58.92	18.47
KRH23226	Soybean	nucleus	51.89	12.73
KRH69557	Soybean	extracellular, mitochondrion, nucleus, vacuole	38.92	12.57
KRH10106	Soybean	nucleus	51.89	12.47
KRH74610	Soybean	cytosol, extracellular, mitochondrion, nucleus	38.38	12.07
KRH29601	Soybean	nucleus	47.57	11.86
KRH24591	Soybean	nucleus	47.57	11.86
KRH03797	Soybean	mitochondrion	38.92	10.23
KRH43579	Soybean	plastid	29.19	9.49
KRH13842	Soybean	plastid	28.65	9.4
KRH56681	Soybean	vacuole	38.92	8.76

Protein Annotations

EMBL:ACUP02012319	EnsemblPlants:KRG89920	EnsemblPlantsGene:GLYMA_20G056100	EntrezGene:100775456	InterPro:DUF936_pln	PANTHER:PTHR31928
PANTHER:PTHR31928:SF2	PFAM:PF06075	ProteinID:KRG89920	ProteinID:KRG89920.1	UniParc:UPI000233A205	UniProt:I1JWK1
MapMan:20.1.5.4.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:13734630..13736406

Molecular Weight (calculated)

20466.7 Da

IEP (calculated)

7.767

GRAVY (calculated)

-0.189

Length

185 amino acids

Sequence
(BLAST)

001: MASLVQGVLL KLLQSMNSNV KVHGEYRSVL LQVISIVLAL SGFELWPNQG FFIKVSDSSH STYVSLSKED NEFILNNKLQ LGQFFYVDRI ESGTLVPILV
101: GVRPVPGRHP FEGNPKDLMQ MLEQSDNVGV NGSKSMDLTE AKENPSSRQK IVIKEEKVGV ASRYMQGVLN PNSRVTEADT NIGSK

Best Arabidopsis Sequence Match ( AT1G08760.1 )
(BLAST)

001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR

Arabidopsis Description

At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.