Factsheet for Zm00001d038770_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
peroxisome 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	peroxisome
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032126_P001	Maize	cytosol	88.8	94.87
Zm00001d017634_P001	Maize	cytosol	69.2	69.48
Zm00001d012110_P001	Maize	nucleus	65.2	65.99
Zm00001d027907_P002	Maize	cytosol, mitochondrion, nucleus, peroxisome	88.4	60.55
KRG89920	Soybean	extracellular, mitochondrion	42.8	57.84
EER95393	Sorghum	cytosol	89.2	39.4
Os03t0181800-01	Rice	cytosol	80.0	34.9
TraesCS4B01G298200.1	Wheat	cytosol	78.0	33.05
TraesCS4D01G297000.1	Wheat	cytosol	78.0	33.05
HORVU4Hr1G077070.1	Barley	cytosol	77.6	32.88
TraesCS4A01G006800.1	Wheat	cytosol	77.6	32.88
GSMUA_Achr1P21840_001	Banana	extracellular	52.4	24.49
VIT_09s0002g00760.t01	Wine grape	mitochondrion	48.8	23.06
AT3G14170.2	Thale cress	cytosol, golgi, mitochondrion, nucleus	45.6	22.53
PGSC0003DMT400074262	Potato	cytosol	46.8	22.5
CDY52268	Canola	mitochondrion	45.6	22.49
CDX97548	Canola	mitochondrion	45.6	22.49
Bra027368.1-P	Field mustard	mitochondrion	45.6	22.49
KRH47653	Soybean	endoplasmic reticulum, nucleus, peroxisome	48.0	22.43
PGSC0003DMT400058976	Potato	mitochondrion	46.0	22.2
Solyc03g122080.2.1	Tomato	mitochondrion	46.0	22.2
KRH06232	Soybean	nucleus	47.2	22.1
Solyc12g049500.1.1	Tomato	cytosol	43.6	21.46
KRH69022	Soybean	golgi, mitochondrion	46.4	21.4
Zm00001d021181_P005	Maize	cytosol, mitochondrion, nucleus	34.4	11.56
Zm00001d031700_P003	Maize	cytosol, mitochondrion, plastid	33.6	11.26
Zm00001d006130_P001	Maize	mitochondrion, plastid	31.6	10.38
Zm00001d040147_P001	Maize	nucleus	24.0	9.97
Zm00001d006732_P001	Maize	plastid	23.2	8.94
Zm00001d052368_P001	Maize	cytosol, mitochondrion, plastid	21.6	7.39

Protein Annotations

EnsemblPlants:Zm00001d038770_P001	EnsemblPlants:Zm00001d038770_T001	EnsemblPlantsGene:Zm00001d038770	EntrezGene:103631604	InterPro:DUF936_pln	ncoils:Coil
PANTHER:PTHR31928	PANTHER:PTHR31928:SF2	PFAM:PF06075	ProteinID:AQK87772.1	SEG:seg	UniParc:UPI0002208DE6
UniProt:A0A1D6MAG6	MapMan:20.1.5.4.2	:	:	:	:

Description

DUF936 family protein

Coordinates

chr6:+:164172805..164173786

Molecular Weight (calculated)

27364.6 Da

IEP (calculated)

9.370

GRAVY (calculated)

-0.444

Length

250 amino acids

Sequence
(BLAST)

001: MASLTPGILL KVLKNINSDV KVCGEYRSIL LQVISIVPAI TGSELWLDHG FFIRVSDSSH STYVSLSKED NELILSNKLQ LEQFIYVEKV QSSIPVPVLV
101: GVHPVPGRNP CIGNPKDLMQ MSTPFGITEA PDHQWRTSKS ADMSESEKEN LQRKVIIEEQ KTVVASRYML GVSSNNGKIT SINSSIDSDK SNGGSTISEP
201: NKKSIASKVR QEAKPQEQPN NTSTGNTKLV STKQEISKDT RKNGGASPRL

Best Arabidopsis Sequence Match ( AT3G14170.2 )
(BLAST)

001: MASLTPRVLI KLLETMNTNI KVRGEYRSVL LQVISIVPAL AGSELWPNQG FFIKVSDSSH STYVSLSNED NELILNNKLG IGQFFYVDKL DAGTPVPVLV
101: GVRPISGRHP FVGNPKDLMQ MLVPSETTPR EEEYHNQKKQ KDGARSNIVE NIRKHQPFVI KEEKTGVASR YMKGISNSKA SGSDSSSGGS NNEGETGSIM
201: VAKKVGVLAK GKQREHKDQA RQAGPLQCRP ATAPTKAEPK KLSLSSTVNY INRKSNSAED ASWSSLPVSL SKLGKGMLRR RNLAALIAAE VQREALAASH
301: LIKCISMFAE LSSNASPKNP HTSLRNFFTL QSILDQVQVT VVASKDKSFQ PVNIHSLWME PEKLSKKASL SSSRATMKPS KALTEAEKLE WVKGNGTEEI
401: KELTNTLKRE TRSWFLKFLE DALDTGLHAT VPEKKGKTKG ARLAEPDNHI AETLSQLKQA NEWLEKVKND NLSSDNSLLE NIERLKKKIY SCLLLYVDSA
501: ASAIGV

Arabidopsis Description

Plant protein of unknown function (DUF936) [Source:TAIR;Acc:AT3G14170]
SUBAcon: [mitochondrion,golgi,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.