Factsheet for GSMUA_Achr4P03420_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P10950_001	Banana	cytosol, mitochondrion, nucleus	67.4	68.21
HORVU2Hr1G035200.1	Barley	plastid	23.48	35.82
TraesCS2D01G193600.1	Wheat	plastid	36.49	33.13
TraesCS2A01G194300.1	Wheat	plastid	36.32	32.87
TraesCS2B01G212600.1	Wheat	plastid	36.32	32.67
Zm00001d006732_P001	Maize	plastid	35.81	32.67
Os07t0588300-00	Rice	plastid	34.8	31.79
KXG36592	Sorghum	plastid	35.3	31.67
Bra001755.1-P	Field mustard	nucleus	26.35	26.09
PGSC0003DMT400066158	Potato	nucleus	28.38	25.73
GSMUA_Achr11P...	Banana	cytosol, extracellular, nucleus	18.07	25.54
GSMUA_Achr3P21570_001	Banana	extracellular, peroxisome, plastid	31.42	25.07
PGSC0003DMT400008388	Potato	cytosol	27.7	25.04
Solyc01g107120.2.1	Tomato	cytosol	27.36	24.96
CDY22966	Canola	endoplasmic reticulum	26.35	24.76
Solyc10g049800.1.1	Tomato	cytosol	17.06	24.69
AT3G19610.1	Thale cress	vacuole	26.69	24.69
CDX82287	Canola	endoplasmic reticulum	26.18	24.64
GSMUA_Achr5P25710_001	Banana	cytosol, plasma membrane, plastid	30.57	24.56
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	12.67	24.51
GSMUA_Achr11P...	Banana	plastid	27.87	23.37
GSMUA_Achr1P21840_001	Banana	extracellular	20.1	22.24
GSMUA_Achr7P21900_001	Banana	mitochondrion	25.84	22.24
GSMUA_Achr8P14440_001	Banana	mitochondrion	19.09	21.98
GSMUA_Achr4P10330_001	Banana	mitochondrion	26.35	21.4
GSMUA_Achr9P00810_001	Banana	cytosol, mitochondrion, nucleus	18.75	19.68
GSMUA_Achr9P08220_001	Banana	mitochondrion	31.08	17.13

Protein Annotations

EnsemblPlants:GSMUA_Achr4P03420_001	EnsemblPlants:GSMUA_Achr4T03420_001	EnsemblPlantsGene:GSMUA_Achr4G03420_001	InterPro:DUF936_pln	PANTHER:PTHR31928	PFAM:PF06075
SEG:seg	UniParc:UPI000295ABFB	UniProt:M0SKQ9	MapMan:20.1.5.4.2	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G03420_001]

Coordinates

chr4:-:2718151..2720271

Molecular Weight (calculated)

64398.6 Da

IEP (calculated)

8.102

GRAVY (calculated)

-0.476

Length

592 amino acids

Sequence
(BLAST)

001: MASLSPGVLL RLLQDIDRSD NSPRRPLHHA PLAVLQVTGI VPAVAGSDLS PDRGFYVKVS DSSHCAYVSL PADLNDLILA DRLQLGQLIH VRRLEPASPV
101: PVLREFRLLE GRQPCLHDTK NKRQLHRRSN SFAGDRSGAA GMSSPSFTAV KRERRSSDVL NELKKFSVAC MDEDIYDSDD SRISYPSSPA SSRFSYTSSS
201: SSSSSFSSSS SSSFSSASSS CTVRPRKSWD ATGRIPERRR GMKPSVPSQS ASVSPNRLAR HVSLTPQDDA SGALSACPTN TQRSVKAPVG SAKRKLPDSD
301: KACTESDKMG VISALQPPSL MKHAKVVLRQ RDSTLQAAVD ALLEASAAEK LSECFSMYSE LQSDKDGDPR HTVNGSLTFH HKLAQTRLIA QALSRSSQPN
401: SCGCNSSSPA PLTSVARVAS ERQHCATSWI KAALESDLSR LPEQQKTASE PQEAPPSNAD VLSPTTHSHR PKNTASSMGS NNLLLASSAL QHEYNRWFLR
501: YIDKFLDSIQ GETGYGACEL EVASLLCQLK RVDDWLNDVT GKEVTEDEAE ACERVRRKIY GILLRHVESA AIALESMSTP EGEMDRDLML CG

Best Arabidopsis Sequence Match ( AT3G14170.1 )
(BLAST)

001: MASLTPRVLI KLLETMNTNI KVRGEYRSVL LQVISIVPAL AGSELWPNQG FFIKVSDSSH STYVSLSNED NELILNNKLG IGQFFYVDKL DAGTPVPVLV
101: GVRPISGRHP FVGNPKDLMQ MLVPSETTPR EEEYHNQKKK DGARSNIVEN IRKHQPFVIK EEKTGVASRY MKGISNSKAS GSDSSSGGSN NEGETGSIMV
201: AKKVGVLAKG KQREHKDQAR QAGPLQCRPA TAPTKAEPKK LSLSSTVNYI NRKSNSAEDA SWSSLPVSLS KLGKGMLRRR NLAALIAAEV QREALAASHL
301: IKCISMFAEL SSNASPKNPH TSLRNFFTLQ SILDQVQVTV VASKDKSFQP VNIHSLWMEP EKLSKKASLS SSRATMKPSK ALTEAEKLEW VKGNGTEEIK
401: ELTNTLKRET RSWFLKFLED ALDTGLHATV PEKKGKTKGA RLAEPDNHIA ETLSQLKQAN EWLEKVKNDN LSSDNSLLEN IERLKKKIYS CLLLYVDSAA
501: SAIGV

Arabidopsis Description

Plant protein of unknown function (DUF936) [Source:TAIR;Acc:AT3G14170]
SUBAcon: [mitochondrion,golgi,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.