Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400008388 | Potato | cytosol | 94.13 | 58.78 |
| Solyc01g107120.2.1 | Tomato | cytosol | 59.41 | 37.44 |
| Bra001755.1-P | Field mustard | nucleus | 34.23 | 23.41 |
| CDX82287 | Canola | endoplasmic reticulum | 34.72 | 22.58 |
| CDY22966 | Canola | endoplasmic reticulum | 34.23 | 22.22 |
| AT3G19610.1 | Thale cress | vacuole | 33.99 | 21.72 |
| Solyc03g122080.2.1 | Tomato | mitochondrion | 23.72 | 18.73 |
| Solyc06g073110.2.1 | Tomato | endoplasmic reticulum, extracellular, nucleus | 32.76 | 17.94 |
| GSMUA_Achr4P10950_001 | Banana | cytosol, mitochondrion, nucleus | 25.43 | 17.78 |
| Solyc12g049500.1.1 | Tomato | cytosol | 21.27 | 17.13 |
| GSMUA_Achr4P03420_001 | Banana | cytosol | 24.69 | 17.06 |
| Solyc05g005580.2.1 | Tomato | mitochondrion | 24.69 | 16.95 |
| Zm00001d006732_P001 | Maize | plastid | 25.67 | 16.18 |
| KXG36592 | Sorghum | plastid | 25.67 | 15.91 |
| Os07t0588300-00 | Rice | plastid | 24.94 | 15.74 |
| TraesCS2D01G193600.1 | Wheat | plastid | 24.45 | 15.34 |
| TraesCS2B01G212600.1 | Wheat | plastid | 24.45 | 15.2 |
| Solyc01g081640.2.1 | Tomato | cytosol | 23.23 | 15.15 |
| TraesCS2A01G194300.1 | Wheat | plastid | 23.72 | 14.83 |
| Solyc12g007020.1.1 | Tomato | mitochondrion | 23.47 | 14.01 |
| HORVU2Hr1G035200.1 | Barley | plastid | 8.8 | 9.28 |
Protein Annotations
| EnsemblPlants:Solyc10g049800.1.1 | EnsemblPlantsGene:Solyc10g049800.1 | InterPro:DUF936_pln | PANTHER:PTHR31928 | PANTHER:PTHR31928:SF12 | PFAM:PF06075 |
| SEG:seg | UniParc:UPI000276A211 | UniProt:K4D0D7 | MapMan:20.1.5.4.2 | : | : |
Description
No Description!
Coordinates
chr10:-:46829638..46832167
Molecular Weight (calculated)
45752.4 Da
IEP (calculated)
10.041
GRAVY (calculated)
-0.663
Length
409 amino acids
Sequence
(BLAST)
(BLAST)
001: MATLKSGVLV KFLEDMKIGG NASELEENGK TILLQIRSIV PVLEEGDLWP NRGFYLKVSD ISHAMYVSLP EEQNEMILAN QLKLGQFIYV QKLEDAHPFP
101: LIRGVTPLPG RRPCEGVPQD IDSIANVMNI LQASNSDCIV EKTVISENRI IEIPSNAGKL SRGLSDPDGL KNKNDHLERK SKGKFRSLSA SKVRSGERTV
201: GLDCTAKRSD SEKRNSHLFR ELQKRKKRSF DIDSDTESIL SLLSFSSHNS KRRSWNESEI LEVKEIFDSS VVKHDKRPPR SRSPTVSSVR SVRYDSSDDN
301: SSSIARRREV GSAKKMKSST KDKTSFSKIN CEQASHPIDR LANDRQGAET GISWDSLPSS LVKLGKEVVK QRDTALIAAT DALQEACAAE RLLNSLRKRH
401: KGRDRGNPW
101: LIRGVTPLPG RRPCEGVPQD IDSIANVMNI LQASNSDCIV EKTVISENRI IEIPSNAGKL SRGLSDPDGL KNKNDHLERK SKGKFRSLSA SKVRSGERTV
201: GLDCTAKRSD SEKRNSHLFR ELQKRKKRSF DIDSDTESIL SLLSFSSHNS KRRSWNESEI LEVKEIFDSS VVKHDKRPPR SRSPTVSSVR SVRYDSSDDN
301: SSSIARRREV GSAKKMKSST KDKTSFSKIN CEQASHPIDR LANDRQGAET GISWDSLPSS LVKLGKEVVK QRDTALIAAT DALQEACAAE RLLNSLRKRH
401: KGRDRGNPW
001: MQQIEKRSLL CSFLSVFHLI HLQALLLEMA ELRSGVLFKL LEEMGVGKVR RDVDHRPVLL QIRCIIPVLA AGGLWPNKGF FLRITDSTHS IYVSLPREEN
101: DLVLYDKLQI GQLIFVEKLE FAYPVPMIKG IRPTPGRRAC TGDPIDLIPK ERIEKFCVGL SDIEENYDHQ VKKPRRTRWN NSSVSELNFT DLGLSKNLSS
201: VMEEKDDTES MISSCSSSFS SAARRRSWIG SADNRKRRDS LDPSMIKNHD HDTKHVSRAR SSSATSPSLS IRSYGGIEEK SSSRTRRRDV VVSPSPRWSK
301: SLSYGSRSNK SKNLLPPKSN TFESSDPISR KRSWTETEIL WDSLPPKVVN LGKEILRQRD TAIRAASQAL LEASAAERLL KCLRSYSELS DRRNQHQENQ
401: QPPIQDFLSF QDELSKSRLI IQSLSTEKTE HCNANIVKTG DERREKATQW IKSALATDLK LVSLSASKPT QSPGRKGLTL IAQESDNREG NASESNSRLG
501: EIKERLSRAS SELRNWLKEE GRSWYLNRVE KYLDEISNGT KWREMRSEEV GETMYQIKRV SDWLDTIVKG EEDEEEKMVM MMMSESETEA CGRVRNKIYR
601: ILLKHVETTS LLSHQRSTSL MSHHQQQQHE QHLFQKTMSL
101: DLVLYDKLQI GQLIFVEKLE FAYPVPMIKG IRPTPGRRAC TGDPIDLIPK ERIEKFCVGL SDIEENYDHQ VKKPRRTRWN NSSVSELNFT DLGLSKNLSS
201: VMEEKDDTES MISSCSSSFS SAARRRSWIG SADNRKRRDS LDPSMIKNHD HDTKHVSRAR SSSATSPSLS IRSYGGIEEK SSSRTRRRDV VVSPSPRWSK
301: SLSYGSRSNK SKNLLPPKSN TFESSDPISR KRSWTETEIL WDSLPPKVVN LGKEILRQRD TAIRAASQAL LEASAAERLL KCLRSYSELS DRRNQHQENQ
401: QPPIQDFLSF QDELSKSRLI IQSLSTEKTE HCNANIVKTG DERREKATQW IKSALATDLK LVSLSASKPT QSPGRKGLTL IAQESDNREG NASESNSRLG
501: EIKERLSRAS SELRNWLKEE GRSWYLNRVE KYLDEISNGT KWREMRSEEV GETMYQIKRV SDWLDTIVKG EEDEEEKMVM MMMSESETEA CGRVRNKIYR
601: ILLKHVETTS LLSHQRSTSL MSHHQQQQHE QHLFQKTMSL
Arabidopsis Description
Plant protein of unknown function (DUF936) [Source:TAIR;Acc:AT3G19610]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.