Factsheet for GSMUA_Achr9P00810_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P14440_001	Banana	mitochondrion	62.77	68.87
Os01t0108800-01	Rice	cytosol	22.52	54.98
EES02630	Sorghum	cytosol, extracellular, mitochondrion, nucleus	49.47	48.86
TraesCS3A01G000300.1	Wheat	cytosol, extracellular, mitochondrion, nucleus	46.28	48.6
TraesCS3D01G008800.1	Wheat	cytosol, extracellular, mitochondrion, nucleus	46.63	47.99
VIT_01s0026g00030.t01	Wine grape	mitochondrion	50.0	47.64
TraesCS3B01G003800.1	Wheat	cytosol, extracellular, mitochondrion, nucleus	45.92	47.35
KRH69557	Soybean	extracellular, mitochondrion, nucleus, vacuole	46.81	46.07
AT1G23790.1	Thale cress	nucleus	42.2	45.95
Zm00001d040147_P001	Maize	nucleus	48.23	45.18
KRH74610	Soybean	cytosol, extracellular, mitochondrion, nucleus	46.81	44.9
Solyc05g005580.2.1	Tomato	mitochondrion	47.34	44.8
PGSC0003DMT400079598	Potato	mitochondrion	46.99	44.46
OQU86510	Sorghum	cytosol	38.12	43.97
CDY61547	Canola	nucleus	39.72	43.92
Bra016331.1-P	Field mustard	nucleus	41.49	43.66
Bra024618.1-P	Field mustard	nucleus	39.89	43.6
AT1G70340.1	Thale cress	mitochondrion	39.36	43.53
CDY47633	Canola	nucleus	39.89	43.44
CDX91723	Canola	nucleus	40.96	43.26
CDY57317	Canola	nucleus	40.96	42.15
HORVU3Hr1G000140.4	Barley	plastid	46.63	42.01
GSMUA_Achr1P21840_001	Banana	extracellular	20.92	22.06
GSMUA_Achr11P...	Banana	cytosol, extracellular, nucleus	15.96	21.48
GSMUA_Achr7P21900_001	Banana	mitochondrion	25.0	20.49
GSMUA_Achr4P10950_001	Banana	cytosol, mitochondrion, nucleus	21.1	20.34
GSMUA_Achr5P25710_001	Banana	cytosol, plasma membrane, plastid	26.42	20.22
GSMUA_Achr3P21570_001	Banana	extracellular, peroxisome, plastid	26.6	20.22
GSMUA_Achr4P10330_001	Banana	mitochondrion	24.65	19.07
GSMUA_Achr11P...	Banana	plastid	23.58	18.84
GSMUA_Achr4P03420_001	Banana	cytosol	19.68	18.75
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	7.98	14.71
GSMUA_Achr9P08220_001	Banana	mitochondrion	24.82	13.04

Protein Annotations

EnsemblPlants:GSMUA_Achr9P00810_001	EnsemblPlants:GSMUA_Achr9T00810_001	EnsemblPlantsGene:GSMUA_Achr9G00810_001	InterPro:DUF936_pln	ncoils:Coil	PANTHER:PTHR31928
PANTHER:PTHR31928:SF20	PFAM:PF06075	SEG:seg	UniParc:UPI0002960AC3	UniProt:M0TWD8	MapMan:20.1.5.4.2

Description

Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G00810_001]

Coordinates

chr9:-:602560..604489

Molecular Weight (calculated)

61337.0 Da

IEP (calculated)

9.957

GRAVY (calculated)

-0.491

Length

564 amino acids

Sequence
(BLAST)

001: MATLAPGILM KLLDGMKTGT RERRSALLQV TDIVPADLDE KDLWPKRGFY IKLSDSSHSI YVTLPFDQDE LVLSNKLQLG QFIHVDRLQP ASPVPVVVGA
101: KPLPGRHPLV GTPEPIVRVR GRGDEKSSAK HTAASSVHRR GSWEQNHVPS PMIVKPTALD FGERTPMKDR FQSNVVLSPP ASARLGKEVS SAFAVASSVS
201: GALLSRMADA REAVGSGLLR KSCSISKFSR SKCVAEREAK TPRTSLSILT CSFPSLPLQE KNATKTPLLK SRGDAREEDS SWTSDEHSSS TAIDNATAAN
301: HISSERLSLP GKINTLGKEA LEQRKAAQRV ALQALRDASA TETIVRVLKM FSELSSSAKP EEPAACFDQF LCFHQEIVQA AAGIEAVQAA TTSVAEESTK
401: EQDDKDDSSV LQARDHNADN QHGQSIKRRA ASAVSKTDEN KVGLGKHPRS DSNHKDKKEQ DEAKLPTSTS SLGRSIELAK QIRTEAGKWF MEFLEATLES
501: GFKTTKGAVG GGGHRSKSVC CCPQSLILRV INWVELERCE GGKRPLHPRT AQIARKLRIK AKNP

Best Arabidopsis Sequence Match ( AT1G23790.1 )
(BLAST)

001: MAALAPGILQ KLIDGMKTGV KPTGEHRSSL LQVTDIVPID LDEKNLLPKQ GFFIKVSDSS HSIYVSLPSD QDDDVLSNKM QLGQFIYVDR LDPGTPVPII
101: KGARPIPGRH PLLGTPEPLM STRGKIESSR PRRGSWGQNG DVSSPFVLKP APLDFDQCTP AKHRLGTGRF MAASPNVMTR GRSPGGVRCS YGGGLLSKMA
201: ESPAAMMRKS CVVPPSSKFP RSKSVCDRET MAKNSVLFSP FKSSAKKNDS PPPSVRTRRA TAASLLEDER EAPKSTSKYS KLEKPEKSLS LPGRLSTLSK
301: EAMQQRETAQ KIALQALREA TTTETVVRHL KTFANLSKSA KADCPAACFD KFLEFHSQIS ETMNEIASIE AAASPATTEK KSEDGSLILH EIQHNSIDQE
401: KTTSKRRILL KQQQKRSNDE NKNPAVSLSG LGNTARLVKE IEKEAANWFM EFIEKALEKG MKKCKGTSDA DVKKVPQSLI LKVVNWVEEE HSADNTKRPV
501: HPKASHITRK LRIKLKNP

Arabidopsis Description

At1g23790 [Source:UniProtKB/TrEMBL;Acc:Q9ZUB7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.