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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 2
  • golgi 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 1
  • mitochondrion 2
  • nucleus 1
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES02630 Sorghum cytosol, extracellular, mitochondrion, nucleus 78.36 31.7
TraesCS3A01G000300.1 Wheat cytosol, extracellular, mitochondrion, nucleus 73.59 31.66
TraesCS3B01G003800.1 Wheat cytosol, extracellular, mitochondrion, nucleus 72.73 30.71
TraesCS3D01G008800.1 Wheat cytosol, extracellular, mitochondrion, nucleus 72.29 30.47
Zm00001d040147_P001 Maize nucleus 77.92 29.9
HORVU3Hr1G000140.4 Barley plastid 74.46 27.48
OQU86510 Sorghum cytosol 58.01 27.4
GSMUA_Achr8P14440_001 Banana mitochondrion 57.58 25.88
AT1G23790.1 Thale cress nucleus 51.08 22.78
GSMUA_Achr9P00810_001 Banana cytosol, mitochondrion, nucleus 54.98 22.52
CDY61547 Canola nucleus 48.48 21.96
Bra024618.1-P Field mustard nucleus 48.48 21.71
Bra016331.1-P Field mustard nucleus 50.22 21.64
CDY47633 Canola nucleus 48.48 21.62
AT1G70340.1 Thale cress mitochondrion 47.62 21.57
CDY57317 Canola nucleus 50.22 21.17
CDX91723 Canola nucleus 48.92 21.16
KRH74610 Soybean cytosol, extracellular, mitochondrion, nucleus 53.68 21.09
VIT_01s0026g00030.t01 Wine grape mitochondrion 53.68 20.95
KRH69557 Soybean extracellular, mitochondrion, nucleus, vacuole 51.52 20.77
Solyc05g005580.2.1 Tomato mitochondrion 52.81 20.47
PGSC0003DMT400079598 Potato mitochondrion 51.95 20.13
Os09t0516700-01 Rice cytosol, extracellular, nucleus 33.77 16.85
Os03t0181800-01 Rice cytosol 31.17 12.57
Os08t0541500-01 Rice mitochondrion, peroxisome, plastid 35.93 11.32
Os11t0120200-01 Rice cytosol, mitochondrion, nucleus 31.17 10.17
Os12t0120000-01 Rice cytosol, mitochondrion, nucleus 31.17 10.17
Os07t0588300-00 Rice plastid 25.97 9.26
Protein Annotations
EnsemblPlants:Os01t0108800-01EnsemblPlantsGene:Os01g0108800InterPro:DUF936_plnPANTHER:PTHR31928PANTHER:PTHR31928:SF6PFAM:PF06075
ProteinID:BAH90854.1ProteinID:BAS69993.1SEG:segUniParc:UPI0001B65F31UniProt:C7IWJ2MapMan:20.1.5.4.2
Description
Protein of unknown function DUF936, plant family protein. (Os01t0108800-01)
Coordinates
chr1:+:483887..486492
Molecular Weight (calculated)
24774.0 Da
IEP (calculated)
11.021
GRAVY (calculated)
-0.303
Length
231 amino acids
Sequence
(BLAST)
001: MSTLSAGVLL KLLDGMKAGA AKPVGEHRTA LLQVTDIVPA DLDDKDLLPR HGKFYVKVSD SSHSIYATLP LPQADLVLSN KLQLGQFVHL DRLDPGSPVP
101: VIVGARPLPG RHPLVVGTPD PATRAKPAAP RRGSWGPENH AGILASPRVI KPTTLNFEDR TPVKERPPAP SPARSTASSL RKSSSVLPRI TRSKSFVADR
201: APDHPKIPKS PFPAVRNPPL YTPSSIRLDS I
Best Arabidopsis Sequence Match ( AT1G23790.1 )
(BLAST)
001: MAALAPGILQ KLIDGMKTGV KPTGEHRSSL LQVTDIVPID LDEKNLLPKQ GFFIKVSDSS HSIYVSLPSD QDDDVLSNKM QLGQFIYVDR LDPGTPVPII
101: KGARPIPGRH PLLGTPEPLM STRGKIESSR PRRGSWGQNG DVSSPFVLKP APLDFDQCTP AKHRLGTGRF MAASPNVMTR GRSPGGVRCS YGGGLLSKMA
201: ESPAAMMRKS CVVPPSSKFP RSKSVCDRET MAKNSVLFSP FKSSAKKNDS PPPSVRTRRA TAASLLEDER EAPKSTSKYS KLEKPEKSLS LPGRLSTLSK
301: EAMQQRETAQ KIALQALREA TTTETVVRHL KTFANLSKSA KADCPAACFD KFLEFHSQIS ETMNEIASIE AAASPATTEK KSEDGSLILH EIQHNSIDQE
401: KTTSKRRILL KQQQKRSNDE NKNPAVSLSG LGNTARLVKE IEKEAANWFM EFIEKALEKG MKKCKGTSDA DVKKVPQSLI LKVVNWVEEE HSADNTKRPV
501: HPKASHITRK LRIKLKNP
Arabidopsis Description
At1g23790 [Source:UniProtKB/TrEMBL;Acc:Q9ZUB7]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.