CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, extracellular, nucleus

Predictor Summary:

nucleus 2
extracellular 1
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, nucleus, vacuole
Any Predictor:	extracellular, nucleus, vacuole
BaCelLo:	nucleus
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93540	Canola	extracellular, nucleus, vacuole	93.88	93.75
CDY06329	Canola	extracellular, nucleus, peroxisome	71.29	83.84
CDY22665	Canola	extracellular, nucleus, peroxisome	70.75	82.8
AT1G08760.1	Thale cress	cytosol, plastid, vacuole	82.72	81.28
CDX91320	Canola	extracellular	10.88	80.0
CDY05811	Canola	cytosol	14.01	79.84
CDY08643	Canola	mitochondrion, nucleus	10.34	61.79
CDY69908	Canola	plastid	9.52	59.32
Solyc06g073110.2.1	Tomato	endoplasmic reticulum, extracellular, nucleus	57.82	56.89
GSMUA_Achr11P...	Banana	cytosol, extracellular, nucleus	27.76	48.69
Os09t0516700-01	Rice	cytosol, extracellular, nucleus	29.66	47.08
GSMUA_Achr5P25710_001	Banana	cytosol, plasma membrane, plastid	45.17	45.05
GSMUA_Achr3P21570_001	Banana	extracellular, peroxisome, plastid	45.03	44.61
EER99187	Sorghum	cytosol, mitochondrion, nucleus	44.76	44.28
Os08t0541500-01	Rice	mitochondrion, peroxisome, plastid	43.4	43.52
TraesCS7D01G268500.2	Wheat	cytosol, mitochondrion, nucleus	43.4	43.52
TraesCS7B01G166200.1	Wheat	cytosol, mitochondrion, plastid	42.99	43.11
TraesCS7A01G266300.1	Wheat	cytosol, mitochondrion, plastid	42.99	42.99
Zm00001d021181_P005	Maize	cytosol, mitochondrion, nucleus	43.27	42.74
EES14150	Sorghum	cytosol, plasma membrane, plastid	43.13	42.66
Zm00001d031700_P003	Maize	cytosol, mitochondrion, plastid	43.13	42.49
HORVU5Hr1G079460.1	Barley	cytosol, mitochondrion, plastid	43.4	42.42
GSMUA_Achr11P...	Banana	plastid	40.54	42.21
TraesCS5D01G309900.1	Wheat	cytosol, mitochondrion, plastid	42.86	42.11
TraesCS5B01G303400.1	Wheat	cytosol, mitochondrion, plastid	42.99	42.08
Zm00001d006130_P001	Maize	mitochondrion, plastid	43.54	42.05
TraesCS5A01G303100.1	Wheat	cytosol, mitochondrion, plastid	42.72	41.81
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	16.46	39.54
CDX97548	Canola	mitochondrion	23.95	34.71
CDY52268	Canola	mitochondrion	23.67	34.32
CDY61547	Canola	nucleus	20.95	30.2
CDY47633	Canola	nucleus	20.82	29.54
CDX91723	Canola	nucleus	21.22	29.21
CDY60513	Canola	plastid	21.5	29.15
CDY42075	Canola	plastid	21.09	28.34
CDY57317	Canola	nucleus	21.09	28.28
GSMUA_Achr9P08220_001	Banana	mitochondrion	41.22	28.21
CDY43695	Canola	mitochondrion	25.31	28.01
KXG28276	Sorghum	plastid	18.78	27.99
CDY64935	Canola	mitochondrion	24.9	27.98
CDY01127	Canola	mitochondrion	23.81	27.78
TraesCS4D01G082000.1	Wheat	nucleus, plastid	17.55	27.56
HORVU4Hr1G014370.1	Barley	nucleus, plastid	17.41	27.47
CDY69222	Canola	mitochondrion, plastid	15.78	27.36
TraesCS4B01G084100.1	Wheat	nucleus, plastid	17.28	27.31
TraesCS4A01G231900.1	Wheat	nucleus, plastid	16.6	27.29
CDX82287	Canola	endoplasmic reticulum	21.22	24.8
CDY22966	Canola	endoplasmic reticulum	21.22	24.76

Protein Annotations

EnsemblPlants:CDX95036	EnsemblPlantsGene:GSBRNA2T00100554001	InterPro:DUF936_pln	PANTHER:PTHR31928	PANTHER:PTHR31928:SF4	PFAM:PF06075
ProteinID:CDX95036	ProteinID:CDX95036.1	SEG:seg	UniParc:UPI0004EDBCEF	MapMan:20.1.5.4.2	:

Description

BnaC05g06350D

Coordinates

chrLK031886:-:797578..800352

Molecular Weight (calculated)

79191.8 Da

IEP (calculated)

10.192

GRAVY (calculated)

-0.525

Length

735 amino acids

Sequence
(BLAST)

001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVVSIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKLQ LGQFIHVDRV ESSSPVPILR
101: GVRPVPGRHP CLGTPEDIVA ADALGFLSDD NKAKAKAKAV SSEVERNRVS VSVSKDEASE KSKKALVRAK SAKTSLVLDV KKEALGKVKV KTSSSTSGGS
201: KSIPSSPTSC YSLPSSFAKF ANGVKQHQQQ QHQQQQHVKK TVVLEKGSPR MGLSERGRSP LRVESPSNFV QGIEFGAKAL RKSWEGNLDI RSSDRERLKL
301: AKRDSTPDSR SLTAPRKSTS SEKLPSKQER ANVFAKSSKE QSKTQSTKKV ETAGVVDTKE KTSKPKSASV GKKSTAENGL PGNLVKVPVN SKRLASASVQ
401: WGSLPSSLSR LGQEVLRHRD AAQVVAIEAM QEASASESLL QCLIMYNDLM SAAKEDDPLP VVEQFLKLHS GLKNVQVTTE SLSKLISSTS SPENEENKSE
501: EAIKAASEKQ KLAASWVQAA LVTNLSAFSV YSSKTTKSAA SKNKPVIILE SPGNNSTNKP RGNVQNRPTI GSKLVAQGMI RKHRENSSSQ KANTLAAAGS
601: ESPPLNWVKG NGLNEATDLA EKLQTVSQDW FLGFVERFLD ADVVETSSNL SDNGQIAGML SQLKSVNDWL DEIGSKEDEE GLQEVSKETI DRLRKKIYEY
701: LLTHVESAAA ALGGSGNGGG VSSPRPKPIE TKSKR

Best Arabidopsis Sequence Match ( AT1G08760.1 )
(BLAST)

001: MANLVPGVLL KLLQHMNTDV KIAGEHRSSL LQVISIVPAL AGGELFPNQG FYLKVSDSSH ATYVSLPDEH DDLILSDKIQ LGQYIHVDRV ESSSPVPILR
101: GVRPVPGRHP CVGDPEDIVA THSLGFLSDD KVKNDNNGGV SSKPKERVKA SVKANGSGSD GERIIGNRLS VSISRDDSSD GKKPVSALFR AKSAKSSLSL
201: DVKKESLGKL KTSSGSKSIP SSPTSCYSLP NSFAKFANGI KQQQTVKPKL LEKGSPRMGL SEKGRSLLKA ESPKVGKKLP MIKNFVQGIE FGAKALRKSW
301: EGNLDIRGSD RTKSSLPRRD LTPDSRSLAA PRRSTSSEKL PSKQERANVF ARSSKEHNKI QSTKKVEPTA VLDTKDKTSR PKSTSVEKKS VAENGLPGNL
401: VKVSVNGKRL AAANIQWSSL PPSLSRMGQE VLRHREAAQV VAIEALQEAS ASESLLQCLI MYSDLLSTAK EDDPLPVVEQ FLKLHSGLKN VQVITESLSK
501: LLSLMSSPDN EENRSEEAIK AASEKQKLAA SWVQAALVTN LSPFSVYSSK QAKLAASRSK PVIILESPGN NSSSKTRGNI QNKPTIGSKL VAQGMIRKHR
601: ENSSSQKATS VAGSESPPLN WVKGNGLNEA TDLAEKLQMV SQDWFLGFVE RFLDADVITS SSLSLSDNGQ IAGMLSQLKS VNDWLDEIGS KEDEEGLQEV
701: SKETIDRLRK KIYEYLLTHV ESAAAALGGG GGSVSSPRPK PIETKAKR

Arabidopsis Description

At1g08760 [Source:UniProtKB/TrEMBL;Acc:Q9FRR2]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.