Factsheet for AT4G13370.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum

Predictor Summary:

plastid 2
mitochondrion 4
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69222	Canola	mitochondrion, plastid	53.05	84.2
Bra034878.1-P	Field mustard	mitochondrion	80.83	83.31
CDY43695	Canola	mitochondrion	82.02	83.13
CDY64935	Canola	mitochondrion	80.39	82.72
Bra032701.1-P	Field mustard	mitochondrion	76.08	81.27
CDY01127	Canola	mitochondrion	75.48	80.63
VIT_11s0016g04380.t01	Wine grape	plastid	61.66	58.45
KRH03797	Soybean	mitochondrion	57.95	55.4
PGSC0003DMT400001026	Potato	mitochondrion	56.61	55.38
Solyc12g007020.1.1	Tomato	mitochondrion	55.72	54.74
KRH56681	Soybean	vacuole	57.95	47.45
GSMUA_Achr7P21900_001	Banana	mitochondrion	45.32	44.33
Os11t0120200-01	Rice	cytosol, mitochondrion, nucleus	45.62	43.36
Os12t0120000-01	Rice	cytosol, mitochondrion, nucleus	45.62	43.36
TraesCS4B01G123300.1	Wheat	mitochondrion	44.58	42.73
GSMUA_Achr4P10330_001	Banana	mitochondrion	46.06	42.52
TraesCS4A01G192100.1	Wheat	mitochondrion	44.43	42.23
HORVU4Hr1G024210.1	Barley	mitochondrion	44.28	41.91
TraesCS4D01G121400.1	Wheat	mitochondrion	44.28	41.27
EES09151	Sorghum	cytosol, mitochondrion, plastid	42.79	39.78
HORVU4Hr1G024120.1	Barley	plastid	44.28	39.31
Zm00001d052368_P001	Maize	cytosol, mitochondrion, plastid	41.75	38.44
AT3G14170.2	Thale cress	cytosol, golgi, mitochondrion, nucleus	22.59	30.04
AT1G08760.1	Thale cress	cytosol, plastid, vacuole	28.68	25.8
AT1G70340.1	Thale cress	mitochondrion	19.02	25.1
AT1G23790.1	Thale cress	nucleus	19.32	25.1
AT2G31920.1	Thale cress	plastid	20.21	23.25
AT3G19610.1	Thale cress	vacuole	21.55	22.66

Protein Annotations

MapMan:20.1.5.4.2	EntrezGene:826968	UniProt:A0A178V5L1	ProteinID:AEE83271.1	EMBL:AK117121	ArrayExpress:AT4G13370
EnsemblPlantsGene:AT4G13370	RefSeq:AT4G13370	TAIR:AT4G13370	RefSeq:AT4G13370-TAIR-G	EnsemblPlants:AT4G13370.1	TAIR:AT4G13370.1
Unigene:At.33381	EMBL:BT005951	ProteinID:CAB40772.1	ProteinID:CAB78379.1	InterPro:DUF936_pln	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0008017	GO:GO:0008150	RefSeq:NP_193073.1	ProteinID:OAP01166.1	PFAM:PF06075
PO:PO:0000293	PANTHER:PTHR31928	PANTHER:PTHR31928:SF3	UniProt:Q9T0K8	UniParc:UPI0000060DCB	SEG:seg

Description

At4g13370 [Source:UniProtKB/TrEMBL;Acc:Q9T0K8]

Coordinates

chr4:-:7777793..7780366

Molecular Weight (calculated)

73436.2 Da

IEP (calculated)

10.166

GRAVY (calculated)

-0.492

Length

673 amino acids

Sequence
(BLAST)

001: MASLAPGILL KLLQCMNSGT RPTGDHRSAI LQVTGIVPAL AGSDLWPNQG FYVQISDSLN STYVSLSERD TDLILSNRLQ LGQFIYLERL EFATPVPRAA
101: GIRPVAGRHA FVGKPEPLIA RVSNGSKRDF VIQPVSDSEY SLDPIAVYLN NRRIDDDGDS DVKPNVRQAL APVNQNEENR NQIRNQKPKT TPQRFSSPAS
201: SKRSVSSGKK NCSGAVAVTV ERDPSPVVSG KGRRSASPVP SKCVVPSLAA AREENRKVAR EPSIVVPSRY RQPSPNGRKM NPSPSGRRMS ISPGRRLSSG
301: LKMTPMVGDS SGKKKMAVIA AGISKVSEAL VGSSAKNGNR KNWEEPLAGD GSAKNKPDHQ AILRTQAAMT RRLSDANRRK SGSSSSVCEE KAKSCSSESS
401: LLEEVSAFEG LGITYHERKW TDGSVPLDSI SDELAKLGKE AMKRRDFAAK AAARALEEAN ANECIIRCLS KFSELSSASK VGNPLRIINE FLKIYEDVMK
501: YSKIASENSF SLSSDQQNPI SLWVEAALAT NLEVVSLVKS HESPSSLKKS MPTRLSPRPS SKTDNIVGMW TDLDGLKETA KFAVNLQSEM QVWFIEFVEE
601: SLDNKNAAKR SLDGSSIAAV LSQLKQVNEW LDRVSSNQEN KITTMDKIER LKRKIYGFVI HHVGSTYDNS ASS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.