Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005615.1-P | Field mustard | plastid | 74.02 | 79.16 |
| CDY42075 | Canola | plastid | 72.99 | 78.06 |
| CDY60513 | Canola | plastid | 71.11 | 76.75 |
| VIT_13s0320g00010.t01 | Wine grape | cytosol | 37.78 | 39.05 |
| KRH43579 | Soybean | plastid | 34.02 | 34.97 |
| KRH13842 | Soybean | plastid | 32.99 | 34.22 |
| Solyc01g081640.2.1 | Tomato | cytosol | 36.07 | 33.65 |
| PGSC0003DMT400079932 | Potato | cytosol | 33.85 | 33.11 |
| AT3G14170.2 | Thale cress | cytosol, golgi, mitochondrion, nucleus | 19.49 | 22.53 |
| AT1G08760.1 | Thale cress | cytosol, plastid, vacuole | 27.86 | 21.79 |
| AT1G23790.1 | Thale cress | nucleus | 18.63 | 21.04 |
| AT4G13370.1 | Thale cress | endoplasmic reticulum, mitochondrion | 23.25 | 20.21 |
| AT1G70340.1 | Thale cress | mitochondrion | 17.44 | 20.0 |
| AT3G19610.1 | Thale cress | vacuole | 21.71 | 19.84 |
Protein Annotations
| MapMan:20.1.5.4.2 | EntrezGene:817750 | ProteinID:AAD32280.1 | ProteinID:AEC08603.1 | ArrayExpress:AT2G31920 | EnsemblPlantsGene:AT2G31920 |
| RefSeq:AT2G31920 | TAIR:AT2G31920 | RefSeq:AT2G31920-TAIR-G | EnsemblPlants:AT2G31920.1 | TAIR:AT2G31920.1 | ncoils:Coil |
| InterPro:DUF936_pln | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003746 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006412 | GO:GO:0006414 | GO:GO:0008017 | GO:GO:0008135 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | RefSeq:NP_180751.1 | PFAM:PF06075 |
| PANTHER:PTHR31928 | PANTHER:PTHR31928:SF7 | UniProt:Q9SKA8 | UniParc:UPI00000AA58B | SEG:seg | : |
Description
Elongation factor 1-delta, putative (DUF936) [Source:UniProtKB/TrEMBL;Acc:Q9SKA8]
Coordinates
chr2:-:13573668..13576381
Molecular Weight (calculated)
64357.3 Da
IEP (calculated)
10.109
GRAVY (calculated)
-0.332
Length
585 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLTPGVLS NLLNIAAGNS PSSPPLLSSH RSPLLQVIEI VPCLSDDQWR SEAFFVKVSD SLHAAYVAVS TGDDADLIRS DEIQLGQFIY ICGGLHVEKG
101: CPVPVIRGLK PVPKRRMCVG NPSDLYSSDL LLPFTQVSVS PTTTKKKNLV ETRRLSLDSA RRSCWDQTPP VTRRRDAALL LSSPRLKSKL VLNDKSLLKI
201: ESPSKYFNCG TSPALRNKNV VKPGSPISMA SSPKDGIKSP ISKHLNCETP ALRSRYVVKP ASPISVTRSP KDGIKSLSKA VTPPVALFKV PSSHMTWSDQ
301: RMSWSGLPKT IQLLGKEVSS HRQVAVSAAV SALEEASAME SVLFSLQAFA ELCDSTKKLS TGQVVARFLD IYHNTQNTCK AVHRLLTQNR NNGSCRLVVN
401: KNATSWVQAA VVTGFSQFNL FKEPGKKGDA ADHHYIVMQN SSEKLNPKET TSSRTPSYKG AKPPATKHCS VSDRSSLEGK SSLKDSTSLA DELVQVSSQW
501: FLKYLENSLN KGSFLVKTEE TNGKESLLVH LKALNHWLDD LNLNRTETNE KVEDLRKKLQ RFLLEHIESV IGDTYNMKRK IINSI
101: CPVPVIRGLK PVPKRRMCVG NPSDLYSSDL LLPFTQVSVS PTTTKKKNLV ETRRLSLDSA RRSCWDQTPP VTRRRDAALL LSSPRLKSKL VLNDKSLLKI
201: ESPSKYFNCG TSPALRNKNV VKPGSPISMA SSPKDGIKSP ISKHLNCETP ALRSRYVVKP ASPISVTRSP KDGIKSLSKA VTPPVALFKV PSSHMTWSDQ
301: RMSWSGLPKT IQLLGKEVSS HRQVAVSAAV SALEEASAME SVLFSLQAFA ELCDSTKKLS TGQVVARFLD IYHNTQNTCK AVHRLLTQNR NNGSCRLVVN
401: KNATSWVQAA VVTGFSQFNL FKEPGKKGDA ADHHYIVMQN SSEKLNPKET TSSRTPSYKG AKPPATKHCS VSDRSSLEGK SSLKDSTSLA DELVQVSSQW
501: FLKYLENSLN KGSFLVKTEE TNGKESLLVH LKALNHWLDD LNLNRTETNE KVEDLRKKLQ RFLLEHIESV IGDTYNMKRK IINSI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.