Factsheet for Os09t0423700-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0350900-02
Os02t0747400-01
Os03t0797600-01
Os05t0154600-01
Os06t0226700-01
Os07t0182200-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24860.1	Os01t0350900-02	AT2G47700.1	21798944
AT2G24860.1	Os05t0154600-01	AT2G47700.1	21798944
AT2G24860.1	Os02t0747400-01	AT3G47620.1	21798944
AT2G24860.1	Os06t0226700-01	AT3G47620.1	21798944
AT2G24860.1	Os03t0797600-01	AT4G02590.1	21798944
AT2G24860.1	Os07t0182200-01	AT4G02590.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G229500.1	Wheat	plastid	75.33	76.35
TraesCS5B01G220500.1	Wheat	plastid	74.67	75.68
KXG35655	Sorghum	plastid	67.33	68.24
TraesCS5A01G221700.1	Wheat	plastid	74.0	60.33
KRH15687	Soybean	plastid	48.67	59.35
GSMUA_Achr6P01920_001	Banana	plastid	58.67	57.89
Bra032056.1-P	Field mustard	plastid	56.67	57.43
CDY36149	Canola	plastid	56.67	57.43
CDY45605	Canola	plastid	56.67	57.43
AT2G24860.1	Thale cress	plastid	54.0	56.25
HORVU5Hr1G064120.1	Barley	cytosol, nucleus	75.33	55.39
VIT_04s0008g06970.t01	Wine grape	plastid	52.67	54.11
KRH61641	Soybean	plastid	49.33	53.24
Zm00001d020538_P001	Maize	cytosol	49.33	48.68
Solyc08g006620.2.1	Tomato	cytosol	46.67	46.36
KRH52306	Soybean	plastid	48.67	44.24
KRH05342	Soybean	extracellular	48.0	40.68

Protein Annotations

EMBL:AK061595	EnsemblPlants:Os09t0423700-01	EnsemblPlantsGene:Os09g0423700	EntrezGene:4347100	InterPro:HSP_DnaJ_Cys-rich_dom_sf	PANTHER:PTHR15852
PANTHER:PTHR15852:SF13	ProteinID:BAD33426.1	ProteinID:BAF25128.1	ProteinID:BAT08148.1	RefSeq:XP_015611857.1	SEG:seg
SUPFAM:SSF57938	UniParc:UPI00003FF39C	UniProt:Q69QJ6	MapMan:35.2	:	:

Description

Heat shock protein DnaJ, cysteine-rich region domain containing protein. (Os09t0423700-01)

Coordinates

chr9:+:15358373..15360507

Molecular Weight (calculated)

15989.5 Da

IEP (calculated)

9.382

GRAVY (calculated)

-0.207

Length

150 amino acids

Sequence
(BLAST)

001: MPAMACGARA GAAFPSPRPA RAPWPPGRFR ALVPAPPALR LGLLRLPPPM ASTIDSPGSS SDFAKRMERA WLISQQPRPN PCSSCQSAGH VECKWCTGTG
101: FFILGNNMLC EVPSKNTKCV ICSGKGFATC ADCKGTGFRA KWLEDPPVDK

Best Arabidopsis Sequence Match ( AT2G24860.1 )
(BLAST)

001: MTICMCCDSH LVAKSILNPW NSPRITKLGF VPVVRRFPAT TTVKASAVDS PESSSNFAKR MDQAWIISQQ PSPVGCSSCN SKGHVECKWC AGTGFFILGD
101: NMLCQVPSRN TSCVICSGQG SASCSDCKGT GFRAKWLEKP PVPT

Arabidopsis Description

At2g24860/F27C12.22 [Source:UniProtKB/TrEMBL;Acc:Q9SK46]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.