Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g009120.2.1 | Tomato | nucleus | 83.94 | 84.18 |
| VIT_08s0007g03880.t01 | Wine grape | nucleus | 45.51 | 43.91 |
| KRH32653 | Soybean | nucleus | 36.42 | 39.08 |
| KRG96135 | Soybean | nucleus | 34.61 | 36.31 |
| AT2G36480.1 | Thale cress | nucleus | 33.08 | 35.93 |
| KRH67849 | Soybean | nucleus | 34.32 | 34.72 |
| KRG96139 | Soybean | nucleus | 33.65 | 34.17 |
| Bra005265.1-P | Field mustard | nucleus, plastid | 32.12 | 33.63 |
| CDX75035 | Canola | nucleus | 32.41 | 33.47 |
| CDY33156 | Canola | nucleus | 26.1 | 33.13 |
| GSMUA_Achr10P... | Banana | nucleus | 28.2 | 32.96 |
| OQU89013 | Sorghum | nucleus | 30.02 | 30.6 |
| Os09t0566100-01 | Rice | nucleus | 31.26 | 30.59 |
| GSMUA_Achr11P... | Banana | nucleus | 29.73 | 30.31 |
| TraesCS4D01G010100.1 | Wheat | plastid | 27.92 | 29.26 |
| TraesCS4A01G301900.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 24.0 | 28.14 |
| GSMUA_Achr3P22800_001 | Banana | nucleus | 30.98 | 27.69 |
| HORVU4Hr1G001840.2 | Barley | nucleus | 28.59 | 26.94 |
| Zm00001d005350_P005 | Maize | plastid | 29.73 | 26.79 |
| Zm00001d019856_P005 | Maize | plastid | 28.2 | 26.72 |
| TraesCS4B01G012000.1 | Wheat | cytosol | 20.08 | 25.45 |
| PGSC0003DMT400075619 | Potato | nucleus | 23.33 | 25.0 |
| CDY69913 | Canola | nucleus | 17.02 | 24.83 |
Protein Annotations
| Gene3D:1.25.40.90 | EntrezGene:102593629 | MapMan:16.2.1.5.2 | InterPro:CID_dom | InterPro:ENTH_VHS | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR006569 | InterPro:IPR008942 | InterPro:IPR013087 | UniProt:M0ZSC5 |
| PFAM:PF04818 | EnsemblPlantsGene:PGSC0003DMG400002717 | PGSC:PGSC0003DMG400002717 | EnsemblPlants:PGSC0003DMT400007032 | ScanProsite:PS00028 | PFscan:PS50157 |
| PFscan:PS51391 | PANTHER:PTHR15921 | PANTHER:PTHR15921:SF5 | InterPro:RNA_pol_II-bd | SMART:SM00582 | SUPFAM:SSF48464 |
| UniParc:UPI000295E58B | RefSeq:XP_006341164.1 | InterPro:Znf_C2H2_type | SEG:seg | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400002717]
Coordinates
chr9:-:3837154..3846461
Molecular Weight (calculated)
113488.0 Da
IEP (calculated)
7.448
GRAVY (calculated)
-0.678
Length
1046 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEMEGSRRPF DRSRLEPGPK KPRLIEAPIG TERGSNGRSF IPQRGAGNSR IRASDRGGDS ENSDSIRGSF QQQQQQQQQT QHQELVSQYK TALAELTFNS
0101: KPIITNLTII AGENLQAAKA IAATICNNII EVPTEQKLPS LYLLDSIVKN IGRDYIKYFA TRLPEVFCKA YRQVEPSVHP GMRHLFGTWK GVFPPQQLQL
0201: IEKELGFTTG VNGSSSGTSR PDPQAQRPAH SIHVNPKYLE ARQRLQQSTK AKGAVSDISS TLNVNEDAER PERTTSVSSG RPWIDPSIKR AQKEKLNEHV
0301: PEKTIGTAYG DSDYVSDLSR RAAFGVGRGG ERFKEQGFDK PWYDSGTGKI LNQRSGLDIK HGFQSIPQKS ATSDAHPQLI PSLPNRTSTL TDRSWKNSEE
0401: EEYMWDDVNN AAKDRWASED SDKSDLENQL RRPQSTRDVG LRADSEASAD SLSAEERGSA SFGNQMSAMW SRESHALDGA RHSASVQGAP VHPEGYQTSF
0501: CGLSKAANSV SRASYKLQTG SVHVGTPNIG PMNATLESRG SIVQQGETLR AASPSAQSPM HQRPPSPSLI TSNTNQVINS PGEQYQMQTS SRSDPRLSQI
0601: SRRSNLDPRN QFAQESLAMP SRNSVSVNSQ RQQPPSLQNS SALSSSHQSR HKVQRESLES EYSGQTKNST APQISGFPDP SSTSSLLAAV LKSGVIGNKS
0701: SSGTTSSSLD KGALSSQASA QPHPAQFSPS GPRIPLASVT SLSMDRNASN PPNYPQRNVE QPPLPPGLPR TLVGSASLQT PNAPNTASSP LSSILSTLVA
0801: KGLISASKKD PPIYTPSDTP PQTQNLIPPA SSISTPALSA PISASVPSSA PKDELSHSKP SAKTLEVLLQ STNEEAKSLI GLVFKPDVIR NSHPAVISDL
0901: LDDVPHQCGI CGFGLKLQEK LDRHLEWHSL RNPDVKLLNN SRKWYLNSGE WIAAFGGLPC GDKSKGPAGG SSETSECTET MVPADECQCV CVLCGEFFED
1001: FYNEESDEWM FKDAVYMSIP SESDCQGPIV HKNCISESSC QELGLA
0101: KPIITNLTII AGENLQAAKA IAATICNNII EVPTEQKLPS LYLLDSIVKN IGRDYIKYFA TRLPEVFCKA YRQVEPSVHP GMRHLFGTWK GVFPPQQLQL
0201: IEKELGFTTG VNGSSSGTSR PDPQAQRPAH SIHVNPKYLE ARQRLQQSTK AKGAVSDISS TLNVNEDAER PERTTSVSSG RPWIDPSIKR AQKEKLNEHV
0301: PEKTIGTAYG DSDYVSDLSR RAAFGVGRGG ERFKEQGFDK PWYDSGTGKI LNQRSGLDIK HGFQSIPQKS ATSDAHPQLI PSLPNRTSTL TDRSWKNSEE
0401: EEYMWDDVNN AAKDRWASED SDKSDLENQL RRPQSTRDVG LRADSEASAD SLSAEERGSA SFGNQMSAMW SRESHALDGA RHSASVQGAP VHPEGYQTSF
0501: CGLSKAANSV SRASYKLQTG SVHVGTPNIG PMNATLESRG SIVQQGETLR AASPSAQSPM HQRPPSPSLI TSNTNQVINS PGEQYQMQTS SRSDPRLSQI
0601: SRRSNLDPRN QFAQESLAMP SRNSVSVNSQ RQQPPSLQNS SALSSSHQSR HKVQRESLES EYSGQTKNST APQISGFPDP SSTSSLLAAV LKSGVIGNKS
0701: SSGTTSSSLD KGALSSQASA QPHPAQFSPS GPRIPLASVT SLSMDRNASN PPNYPQRNVE QPPLPPGLPR TLVGSASLQT PNAPNTASSP LSSILSTLVA
0801: KGLISASKKD PPIYTPSDTP PQTQNLIPPA SSISTPALSA PISASVPSSA PKDELSHSKP SAKTLEVLLQ STNEEAKSLI GLVFKPDVIR NSHPAVISDL
0901: LDDVPHQCGI CGFGLKLQEK LDRHLEWHSL RNPDVKLLNN SRKWYLNSGE WIAAFGGLPC GDKSKGPAGG SSETSECTET MVPADECQCV CVLCGEFFED
1001: FYNEESDEWM FKDAVYMSIP SESDCQGPIV HKNCISESSC QELGLA
001: MENPRRPFDR SRDPGPMKKP RLSEESIRPV NSNARQFLSQ RTLGTATAVT VPPASSRFRV SGRETESSIV SDPSREAYQP QPVHPHYELV NQYKSALAEL
101: TFNSKPIITN LTIIAGENVH AAKAVVTAIC NNILEVPSDQ KLPTLYLLDS IVKNIGRDYI KYFGARLPEV FVKAYRQVDP PMHSNMRHLF GTWKGVFHPQ
201: TLQLIEKELG FNAKSDGSAA VVSTARAEPQ SQRPPHSIHV NPKYLERQRL QQSGRTKGMV TDVPETAPNL TRDSDRLERV SSIASGGSWV GPAKVNNIRR
301: PQRDLLSEPL YEKDIESIAG EYDYASDLPH NSRSVIKNVG SRITDDGCEK QWYGATNRDP DLISDQRDGL HSKSRTSNYA TARVENLESS GPSRNIGVPY
401: DSWKNSEEEE FMWDMHSRLS ETDVATINPK NELHAPDESE RLESENHLLK RPRFSALDPR FDPANSTNSY SSEQKDPSSI GHWAFSSTNA TSTATRKGIQ
501: PQPRVASSGI LPSSGSGSDR QSPLHDSTSK QNVTKQDVRR AHSLPQRDPR ASRFPAKQNV PRDDSVRLPS SSSQFKNTNM RELPVEIFDS KSAAENAPGL
601: TLASEATGQP NMSDLLEAVM KSGILSNNST CGAIKEESHD EVNPGALTLP AASKPKTLPI SLATDNLLAR LKVEQSSAPL VSCAASLTGI TSVQTSKEKS
701: KASDPLSCLL SSLVSKGLIS ASKTELPSAP SITQEHSPDH STNSSMSVSV VPADAQPSVL VKGPSTAPKV KGLAAPSETS KSEPKDLIGL KFRADKIREL
801: HPSVISSLFD DLPHLCTSCS VRLKQKEELD RHMELHDKKK LELSGTNSKC RVWFPKVDNW IAAKAGELEP EYEEVLSEPE SAIEDCQAVA ADETQCACIL
901: CGEVFEDYFS QEMAQWMFKG ASYLTNPPAN SEASGPIVHT GCLTTSSLQS LEVGIAIKQE IVE
101: TFNSKPIITN LTIIAGENVH AAKAVVTAIC NNILEVPSDQ KLPTLYLLDS IVKNIGRDYI KYFGARLPEV FVKAYRQVDP PMHSNMRHLF GTWKGVFHPQ
201: TLQLIEKELG FNAKSDGSAA VVSTARAEPQ SQRPPHSIHV NPKYLERQRL QQSGRTKGMV TDVPETAPNL TRDSDRLERV SSIASGGSWV GPAKVNNIRR
301: PQRDLLSEPL YEKDIESIAG EYDYASDLPH NSRSVIKNVG SRITDDGCEK QWYGATNRDP DLISDQRDGL HSKSRTSNYA TARVENLESS GPSRNIGVPY
401: DSWKNSEEEE FMWDMHSRLS ETDVATINPK NELHAPDESE RLESENHLLK RPRFSALDPR FDPANSTNSY SSEQKDPSSI GHWAFSSTNA TSTATRKGIQ
501: PQPRVASSGI LPSSGSGSDR QSPLHDSTSK QNVTKQDVRR AHSLPQRDPR ASRFPAKQNV PRDDSVRLPS SSSQFKNTNM RELPVEIFDS KSAAENAPGL
601: TLASEATGQP NMSDLLEAVM KSGILSNNST CGAIKEESHD EVNPGALTLP AASKPKTLPI SLATDNLLAR LKVEQSSAPL VSCAASLTGI TSVQTSKEKS
701: KASDPLSCLL SSLVSKGLIS ASKTELPSAP SITQEHSPDH STNSSMSVSV VPADAQPSVL VKGPSTAPKV KGLAAPSETS KSEPKDLIGL KFRADKIREL
801: HPSVISSLFD DLPHLCTSCS VRLKQKEELD RHMELHDKKK LELSGTNSKC RVWFPKVDNW IAAKAGELEP EYEEVLSEPE SAIEDCQAVA ADETQCACIL
901: CGEVFEDYFS QEMAQWMFKG ASYLTNPPAN SEASGPIVHT GCLTTSSLQS LEVGIAIKQE IVE
Arabidopsis Description
ENTH/VHS family protein [Source:TAIR;Acc:AT2G36480]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.