Subcellular Localization
min:
: max
Winner_takes_all: extracellular, golgi, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 5
- plasma membrane 4
- endoplasmic reticulum 5
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G012000.1 | Wheat | cytosol | 86.44 | 93.45 |
| TraesCS4D01G010100.1 | Wheat | plastid | 88.12 | 78.76 |
| HORVU4Hr1G001840.2 | Barley | nucleus | 86.1 | 69.19 |
| Os09t0566100-01 | Rice | nucleus | 55.38 | 46.21 |
| OQU89013 | Sorghum | nucleus | 46.41 | 40.35 |
| Zm00001d005350_P005 | Maize | plastid | 47.31 | 36.35 |
| Zm00001d019856_P005 | Maize | plastid | 44.62 | 36.05 |
| CDY33156 | Canola | nucleus | 25.45 | 27.55 |
| GSMUA_Achr10P... | Banana | nucleus | 27.02 | 26.93 |
| VIT_08s0007g03880.t01 | Wine grape | nucleus | 29.93 | 24.63 |
| KRH32653 | Soybean | nucleus | 26.91 | 24.62 |
| PGSC0003DMT400007032 | Potato | nucleus | 28.14 | 24.0 |
| Solyc09g009120.2.1 | Tomato | nucleus | 27.47 | 23.49 |
| KRG96135 | Soybean | nucleus | 26.12 | 23.37 |
| AT2G36480.1 | Thale cress | nucleus | 25.0 | 23.16 |
| GSMUA_Achr11P... | Banana | nucleus | 26.46 | 23.0 |
| Bra005265.1-P | Field mustard | nucleus, plastid | 25.0 | 22.32 |
| CDX75035 | Canola | nucleus | 25.34 | 22.31 |
| KRG96139 | Soybean | nucleus | 25.67 | 22.23 |
| KRH67849 | Soybean | nucleus | 25.56 | 22.05 |
| GSMUA_Achr3P22800_001 | Banana | nucleus | 27.58 | 21.03 |
| Solyc10g083590.1.1 | Tomato | nucleus | 25.45 | 20.6 |
| TraesCS7A01G294500.5 | Wheat | nucleus | 21.08 | 20.15 |
| CDY69913 | Canola | nucleus | 15.92 | 19.8 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G301900.1 | EnsemblPlantsGene:TraesCS4A01G301900 | Gene3D:1.25.40.90 | InterPro:CID_dom | InterPro:ENTH_VHS | InterPro:IPR006569 |
| InterPro:IPR008942 | InterPro:RNA_pol_II-bd | PANTHER:PTHR15921 | PANTHER:PTHR15921:SF5 | PFAM:PF04818 | PFscan:PS51391 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00582 | SUPFAM:SSF48464 | TIGR:cd03562 | MapMan:16.2.1.5.2 |
Description
No Description!
Coordinates
chr4A:-:598712564..598716142
Molecular Weight (calculated)
97444.6 Da
IEP (calculated)
7.217
GRAVY (calculated)
-0.691
Length
892 amino acids
Sequence
(BLAST)
(BLAST)
001: MQLLVLLCLA IFAVPSDQKL PSLYLLDSIV KNIGKDYVKH FSSRLPEVFC KAYRQVDPPV HTSMRHLFGT WKGVFSPASL QMIEKELGFQ SSTNGSSGAA
101: PSKADSPSQR PSHSIHVNPK YLEARQQLQQ PNKGILGAGA KTPIISDADD VIERGNRIGI DKGTGRRLDT LNSRPRAQKD TFSNPIHEKP DRDVRGPGIA
201: GAGQVRSKPK GQDGIVGSYY TGGVGSPEEI FDRRNHLYAS KDVRSSGSVR LDSALLPTPV SNSDRIGRLS SSDKSWKNSE EEEYIWDDIR SQGADYGGAS
301: SARKGEPLAD DVNIRSFHRA NWAEPADPLD PDFHKQDTIP RFGHPTSQDR RLARYMDHAE YLHSKREGDP RIDREMWPEG QQFPESRGSS VWLSQEKPRP
401: DIGRDPRISR FSNQSPSITS SVPVGLSAPY AGRSSLESAK QKYWPPSSPP LQARESSPSS SEHDIYASRP FLPLGQNPQE EHNQRAHTLP QNSANSQGRP
501: SLQAALSQAS QQTQKHPAVQ SKPHPKPFHQ PFSQENSSSL FRPSVHLPLS TGMEEQSEEV SLPSGSAHAK SDQISASNLL AGLFKGGFIP NTSDHAVPHS
601: HGLASLPSSS ASENAPSKPH APNSLRPPLP PGPPPTQSAE KAAAPLSSLL SSLVAKGLIS SPSTDSSAVA RKPSKSSLST SDVSASAPPP PIVQPSVAKE
701: TPAPIKALLP KPPVVEMADL IGLEFKPVVL REHRTEVVNR LFDDQSHRCR RCGLRFRLED ELSAHTACNG PEEARNTGIA PERWYPSKSR WIDRLPEPQS
801: IFLDSASDSD LGTAEEACEF MVPADESQII CCLCGEQFDD MYSIDRSEWM YKDAAYYDRS KAEGGSSQSK ELAPIVHARC MPGISNDGMQ VD
101: PSKADSPSQR PSHSIHVNPK YLEARQQLQQ PNKGILGAGA KTPIISDADD VIERGNRIGI DKGTGRRLDT LNSRPRAQKD TFSNPIHEKP DRDVRGPGIA
201: GAGQVRSKPK GQDGIVGSYY TGGVGSPEEI FDRRNHLYAS KDVRSSGSVR LDSALLPTPV SNSDRIGRLS SSDKSWKNSE EEEYIWDDIR SQGADYGGAS
301: SARKGEPLAD DVNIRSFHRA NWAEPADPLD PDFHKQDTIP RFGHPTSQDR RLARYMDHAE YLHSKREGDP RIDREMWPEG QQFPESRGSS VWLSQEKPRP
401: DIGRDPRISR FSNQSPSITS SVPVGLSAPY AGRSSLESAK QKYWPPSSPP LQARESSPSS SEHDIYASRP FLPLGQNPQE EHNQRAHTLP QNSANSQGRP
501: SLQAALSQAS QQTQKHPAVQ SKPHPKPFHQ PFSQENSSSL FRPSVHLPLS TGMEEQSEEV SLPSGSAHAK SDQISASNLL AGLFKGGFIP NTSDHAVPHS
601: HGLASLPSSS ASENAPSKPH APNSLRPPLP PGPPPTQSAE KAAAPLSSLL SSLVAKGLIS SPSTDSSAVA RKPSKSSLST SDVSASAPPP PIVQPSVAKE
701: TPAPIKALLP KPPVVEMADL IGLEFKPVVL REHRTEVVNR LFDDQSHRCR RCGLRFRLED ELSAHTACNG PEEARNTGIA PERWYPSKSR WIDRLPEPQS
801: IFLDSASDSD LGTAEEACEF MVPADESQII CCLCGEQFDD MYSIDRSEWM YKDAAYYDRS KAEGGSSQSK ELAPIVHARC MPGISNDGMQ VD
001: MENPRRPFDR SRDPGPMKKP RLSEESIRPV NSNARQFLSQ RTLGTATAVT VPPASSRFRV SGRETESSIV SDPSREAYQP QPVHPHYELV NQYKSALAEL
101: TFNSKPIITN LTIIAGENVH AAKAVVTAIC NNILEVPSDQ KLPTLYLLDS IVKNIGRDYI KYFGARLPEV FVKAYRQVDP PMHSNMRHLF GTWKGVFHPQ
201: TLQLIEKELG FNAKSDGSAA VVSTARAEPQ SQRPPHSIHV NPKYLERQRL QQSGRTKGMV TDVPETAPNL TRDSDRLERV SSIASGGSWV GPAKVNNIRR
301: PQRDLLSEPL YEKDIESIAG EYDYASDLPH NSRSVIKNVG SRITDDGCEK QWYGATNRDP DLISDQRDGL HSKSRTSNYA TARVENLESS GPSRNIGVPY
401: DSWKNSEEEE FMWDMHSRLS ETDVATINPK NELHAPDESE RLESENHLLK RPRFSALDPR FDPANSTNSY SSEQKDPSSI GHWAFSSTNA TSTATRKGIQ
501: PQPRVASSGI LPSSGSGSDR QSPLHDSTSK QNVTKQDVRR AHSLPQRDPR ASRFPAKQNV PRDDSVRLPS SSSQFKNTNM RELPVEIFDS KSAAENAPGL
601: TLASEATGQP NMSDLLEAVM KSGILSNNST CGAIKEESHD EVNPGALTLP AASKPKTLPI SLATDNLLAR LKVEQSSAPL VSCAASLTGI TSVQTSKEKS
701: KASDPLSCLL SSLVSKGLIS ASKTELPSAP SITQEHSPDH STNSSMSVSV VPADAQPSVL VKGPSTAPKV KGLAAPSETS KSEPKDLIGL KFRADKIREL
801: HPSVISSLFD DLPHLCTSCS VRLKQKEELD RHMELHDKKK LELSGTNSKC RVWFPKVDNW IAAKAGELEP EYEEVLSEPE SAIEDCQAVA ADETQCACIL
901: CGEVFEDYFS QEMAQWMFKG ASYLTNPPAN SEASGPIVHT GCLTTSSLQS LEVGIAIKQE IVE
101: TFNSKPIITN LTIIAGENVH AAKAVVTAIC NNILEVPSDQ KLPTLYLLDS IVKNIGRDYI KYFGARLPEV FVKAYRQVDP PMHSNMRHLF GTWKGVFHPQ
201: TLQLIEKELG FNAKSDGSAA VVSTARAEPQ SQRPPHSIHV NPKYLERQRL QQSGRTKGMV TDVPETAPNL TRDSDRLERV SSIASGGSWV GPAKVNNIRR
301: PQRDLLSEPL YEKDIESIAG EYDYASDLPH NSRSVIKNVG SRITDDGCEK QWYGATNRDP DLISDQRDGL HSKSRTSNYA TARVENLESS GPSRNIGVPY
401: DSWKNSEEEE FMWDMHSRLS ETDVATINPK NELHAPDESE RLESENHLLK RPRFSALDPR FDPANSTNSY SSEQKDPSSI GHWAFSSTNA TSTATRKGIQ
501: PQPRVASSGI LPSSGSGSDR QSPLHDSTSK QNVTKQDVRR AHSLPQRDPR ASRFPAKQNV PRDDSVRLPS SSSQFKNTNM RELPVEIFDS KSAAENAPGL
601: TLASEATGQP NMSDLLEAVM KSGILSNNST CGAIKEESHD EVNPGALTLP AASKPKTLPI SLATDNLLAR LKVEQSSAPL VSCAASLTGI TSVQTSKEKS
701: KASDPLSCLL SSLVSKGLIS ASKTELPSAP SITQEHSPDH STNSSMSVSV VPADAQPSVL VKGPSTAPKV KGLAAPSETS KSEPKDLIGL KFRADKIREL
801: HPSVISSLFD DLPHLCTSCS VRLKQKEELD RHMELHDKKK LELSGTNSKC RVWFPKVDNW IAAKAGELEP EYEEVLSEPE SAIEDCQAVA ADETQCACIL
901: CGEVFEDYFS QEMAQWMFKG ASYLTNPPAN SEASGPIVHT GCLTTSSLQS LEVGIAIKQE IVE
Arabidopsis Description
ENTH/VHS family protein [Source:TAIR;Acc:AT2G36480]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.