Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 2
- plastid 1
- nucleus 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS4A01G301900.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 93.45 | 86.44 |
TraesCS4D01G010100.1 | Wheat | plastid | 88.0 | 72.75 |
HORVU4Hr1G001840.2 | Barley | nucleus | 85.58 | 63.6 |
Os09t0566100-01 | Rice | nucleus | 53.7 | 41.44 |
OQU89013 | Sorghum | nucleus | 43.27 | 34.8 |
Zm00001d005350_P005 | Maize | plastid | 45.21 | 32.13 |
Zm00001d019856_P005 | Maize | plastid | 41.58 | 31.07 |
CDY33156 | Canola | nucleus | 23.03 | 23.06 |
GSMUA_Achr10P... | Banana | nucleus | 24.61 | 22.68 |
VIT_08s0007g03880.t01 | Wine grape | nucleus | 27.27 | 20.76 |
PGSC0003DMT400007032 | Potato | nucleus | 25.45 | 20.08 |
KRH32653 | Soybean | nucleus | 23.52 | 19.9 |
Solyc09g009120.2.1 | Tomato | nucleus | 24.73 | 19.56 |
GSMUA_Achr11P... | Banana | nucleus | 23.76 | 19.1 |
AT2G36480.1 | Thale cress | nucleus | 22.06 | 18.9 |
KRG96135 | Soybean | nucleus | 22.55 | 18.66 |
CDY69913 | Canola | nucleus | 16.0 | 18.41 |
CDX75035 | Canola | nucleus | 22.55 | 18.36 |
Bra005265.1-P | Field mustard | nucleus, plastid | 22.18 | 18.32 |
KRG96139 | Soybean | nucleus | 22.06 | 17.67 |
GSMUA_Achr3P22800_001 | Banana | nucleus | 24.61 | 17.35 |
KRH67849 | Soybean | nucleus | 21.7 | 17.31 |
Solyc10g083590.1.1 | Tomato | nucleus | 22.42 | 16.79 |
TraesCS7B01G181900.3 | Wheat | nucleus | 18.55 | 15.33 |
Protein Annotations
EnsemblPlants:TraesCS4B01G012000.1 | EnsemblPlantsGene:TraesCS4B01G012000 | PANTHER:PTHR15921 | PANTHER:PTHR15921:SF5 | SEG:seg | MapMan:16.2.1.5.2 |
Description
No Description!
Coordinates
chr4B:-:7808606..7811600
Molecular Weight (calculated)
89570.9 Da
IEP (calculated)
6.642
GRAVY (calculated)
-0.760
Length
825 amino acids
Sequence
(BLAST)
(BLAST)
001: MRHLFGTWKG VFSPASLQMI EKELGFQSSA NGSSGAAPSK ADSPSQRPSH SIHVNPKYLE ARQQLQQPNK GILGAGAKTP IISDADDVIE RGNRIGIDKG
101: TGRRLDTLNS RPRAQKVTFS NPIHEKPERD ARGPGIAGAG QVRSKPKGQD GIVGAYYTGG VSSPEEIFDR RNHLYATKDA RSSGSVRLDS ALLPTPVSNS
201: DRIGRLSSSD KSWKNSEEEE YIWDDIPSQG ADYGGASSAR KGEPLADDGN IRSFHRANWA EPGDPLDPDF HKQDTIPRFG HPTSQDRRLA PYMDHAEYLH
301: SKRDGDPRID REMWPEGQPF PESRGSSVWL SQEKLRPDIG RDPRISRFSN QSPSITSSVP VGLSGAYAGR SSLESAKQKY WPPSSPPLQA RESSPSSSEH
401: DIYASRPFLP PQEEHNQRTH ALSQNSVNSQ GRPSLQATLS QASQQSQKHP PVQSKPHPKP FHQPFPQENS SSLFRPSVHL PLSTGIEEQP EEVSLPSGPA
501: HAKSDQISAS NLLAGLFKGG FIPNTSDHAV PHSHGLASLP SSSASENAPL KPHAPNSLRP PLPPGPPPTQ SAEKAAAPLS SLLSSLVAKG LISSPSTDSS
601: AGARNPGKSS PSTSDVSASA PPPPVVQPSV AKETPAPTKA LLPKPPEVEM ADLIGLEFKP VVLREHRTEV VNRLFDDQSH QCRTCGLRFR LEDELSAHTA
701: CNGPEEARNA GIAPERWYPS KSRWIDRLPE PQSIFLDSAS DKDLGTAEEV CEFMVPADES QIICCLCGEQ FDDMYSVDRS EWMYKDAVYY DRSKAEGGSS
801: QSKELAPIVH ARCMPGISND GMEVD
101: TGRRLDTLNS RPRAQKVTFS NPIHEKPERD ARGPGIAGAG QVRSKPKGQD GIVGAYYTGG VSSPEEIFDR RNHLYATKDA RSSGSVRLDS ALLPTPVSNS
201: DRIGRLSSSD KSWKNSEEEE YIWDDIPSQG ADYGGASSAR KGEPLADDGN IRSFHRANWA EPGDPLDPDF HKQDTIPRFG HPTSQDRRLA PYMDHAEYLH
301: SKRDGDPRID REMWPEGQPF PESRGSSVWL SQEKLRPDIG RDPRISRFSN QSPSITSSVP VGLSGAYAGR SSLESAKQKY WPPSSPPLQA RESSPSSSEH
401: DIYASRPFLP PQEEHNQRTH ALSQNSVNSQ GRPSLQATLS QASQQSQKHP PVQSKPHPKP FHQPFPQENS SSLFRPSVHL PLSTGIEEQP EEVSLPSGPA
501: HAKSDQISAS NLLAGLFKGG FIPNTSDHAV PHSHGLASLP SSSASENAPL KPHAPNSLRP PLPPGPPPTQ SAEKAAAPLS SLLSSLVAKG LISSPSTDSS
601: AGARNPGKSS PSTSDVSASA PPPPVVQPSV AKETPAPTKA LLPKPPEVEM ADLIGLEFKP VVLREHRTEV VNRLFDDQSH QCRTCGLRFR LEDELSAHTA
701: CNGPEEARNA GIAPERWYPS KSRWIDRLPE PQSIFLDSAS DKDLGTAEEV CEFMVPADES QIICCLCGEQ FDDMYSVDRS EWMYKDAVYY DRSKAEGGSS
801: QSKELAPIVH ARCMPGISND GMEVD
001: MENPRRPFDR SRDPGPMKKP RLSEESIRPV NSNARQFLSQ RTLGTATAVT VPPASSRFRV SGRETESSIV SDPSREAYQP QPVHPHYELV NQYKSALAEL
101: TFNSKPIITN LTIIAGENVH AAKAVVTAIC NNILEVPSDQ KLPTLYLLDS IVKNIGRDYI KYFGARLPEV FVKAYRQVDP PMHSNMRHLF GTWKGVFHPQ
201: TLQLIEKELG FNAKSDGSAA VVSTARAEPQ SQRPPHSIHV NPKYLERQRL QQSGRTKGMV TDVPETAPNL TRDSDRLERV SSIASGGSWV GPAKVNNIRR
301: PQRDLLSEPL YEKDIESIAG EYDYASDLPH NSRSVIKNVG SRITDDGCEK QWYGATNRDP DLISDQRDGL HSKSRTSNYA TARVENLESS GPSRNIGVPY
401: DSWKNSEEEE FMWDMHSRLS ETDVATINPK NELHAPDESE RLESENHLLK RPRFSALDPR FDPANSTNSY SSEQKDPSSI GHWAFSSTNA TSTATRKGIQ
501: PQPRVASSGI LPSSGSGSDR QSPLHDSTSK QNVTKQDVRR AHSLPQRDPR ASRFPAKQNV PRDDSVRLPS SSSQFKNTNM RELPVEIFDS KSAAENAPGL
601: TLASEATGQP NMSDLLEAVM KSGILSNNST CGAIKEESHD EVNPGALTLP AASKPKTLPI SLATDNLLAR LKVEQSSAPL VSCAASLTGI TSVQTSKEKS
701: KASDPLSCLL SSLVSKGLIS ASKTELPSAP SITQEHSPDH STNSSMSVSV VPADAQPSVL VKGPSTAPKV KGLAAPSETS KSEPKDLIGL KFRADKIREL
801: HPSVISSLFD DLPHLCTSCS VRLKQKEELD RHMELHDKKK LELSGTNSKC RVWFPKVDNW IAAKAGELEP EYEEVLSEPE SAIEDCQAVA ADETQCACIL
901: CGEVFEDYFS QEMAQWMFKG ASYLTNPPAN SEASGPIVHT GCLTTSSLQS LEVGIAIKQE IVE
101: TFNSKPIITN LTIIAGENVH AAKAVVTAIC NNILEVPSDQ KLPTLYLLDS IVKNIGRDYI KYFGARLPEV FVKAYRQVDP PMHSNMRHLF GTWKGVFHPQ
201: TLQLIEKELG FNAKSDGSAA VVSTARAEPQ SQRPPHSIHV NPKYLERQRL QQSGRTKGMV TDVPETAPNL TRDSDRLERV SSIASGGSWV GPAKVNNIRR
301: PQRDLLSEPL YEKDIESIAG EYDYASDLPH NSRSVIKNVG SRITDDGCEK QWYGATNRDP DLISDQRDGL HSKSRTSNYA TARVENLESS GPSRNIGVPY
401: DSWKNSEEEE FMWDMHSRLS ETDVATINPK NELHAPDESE RLESENHLLK RPRFSALDPR FDPANSTNSY SSEQKDPSSI GHWAFSSTNA TSTATRKGIQ
501: PQPRVASSGI LPSSGSGSDR QSPLHDSTSK QNVTKQDVRR AHSLPQRDPR ASRFPAKQNV PRDDSVRLPS SSSQFKNTNM RELPVEIFDS KSAAENAPGL
601: TLASEATGQP NMSDLLEAVM KSGILSNNST CGAIKEESHD EVNPGALTLP AASKPKTLPI SLATDNLLAR LKVEQSSAPL VSCAASLTGI TSVQTSKEKS
701: KASDPLSCLL SSLVSKGLIS ASKTELPSAP SITQEHSPDH STNSSMSVSV VPADAQPSVL VKGPSTAPKV KGLAAPSETS KSEPKDLIGL KFRADKIREL
801: HPSVISSLFD DLPHLCTSCS VRLKQKEELD RHMELHDKKK LELSGTNSKC RVWFPKVDNW IAAKAGELEP EYEEVLSEPE SAIEDCQAVA ADETQCACIL
901: CGEVFEDYFS QEMAQWMFKG ASYLTNPPAN SEASGPIVHT GCLTTSSLQS LEVGIAIKQE IVE
Arabidopsis Description
ENTH/VHS family protein [Source:TAIR;Acc:AT2G36480]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.