Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d019856_P005 | Maize | plastid | 71.44 | 66.39 |
| Zm00001d005350_P005 | Maize | plastid | 72.81 | 64.34 |
| Os09t0566100-01 | Rice | nucleus | 54.68 | 52.48 |
| TraesCS4D01G010100.1 | Wheat | plastid | 47.08 | 48.4 |
| TraesCS4A01G301900.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 40.35 | 46.41 |
| TraesCS4B01G012000.1 | Wheat | cytosol | 34.8 | 43.27 |
| HORVU4Hr1G001840.2 | Barley | nucleus | 46.1 | 42.61 |
| GSMUA_Achr10P... | Banana | nucleus | 27.19 | 31.17 |
| VIT_08s0007g03880.t01 | Wine grape | nucleus | 31.97 | 30.26 |
| PGSC0003DMT400007032 | Potato | nucleus | 30.6 | 30.02 |
| KRG96135 | Soybean | nucleus | 28.85 | 29.69 |
| GSMUA_Achr11P... | Banana | nucleus | 29.53 | 29.53 |
| Solyc09g009120.2.1 | Tomato | nucleus | 29.63 | 29.15 |
| KRH32653 | Soybean | nucleus | 27.58 | 29.03 |
| KRH67849 | Soybean | nucleus | 28.56 | 28.34 |
| KRG96139 | Soybean | nucleus | 28.17 | 28.06 |
| AT2G36480.1 | Thale cress | nucleus | 26.22 | 27.93 |
| Bra005265.1-P | Field mustard | nucleus, plastid | 26.22 | 26.93 |
| CDX75035 | Canola | nucleus | 26.41 | 26.75 |
| CDY33156 | Canola | nucleus | 20.86 | 25.97 |
| GSMUA_Achr3P22800_001 | Banana | nucleus | 29.04 | 25.47 |
| Solyc10g083590.1.1 | Tomato | nucleus | 25.73 | 23.96 |
| OQU80002 | Sorghum | nucleus | 19.49 | 20.94 |
| CDY69913 | Canola | nucleus | 13.16 | 18.83 |
Protein Annotations
| EnsemblPlants:OQU89013 | EnsemblPlantsGene:SORBI_3002G133300 | Gene3D:1.25.40.90 | InterPro:CID_dom | InterPro:ENTH_VHS | InterPro:IPR006569 |
| InterPro:IPR008942 | InterPro:RNA_pol_II-bd | PANTHER:PTHR15921 | PANTHER:PTHR15921:SF5 | PFAM:PF04818 | PFscan:PS51391 |
| ProteinID:OQU89013 | ProteinID:OQU89013.1 | SEG:seg | SMART:SM00582 | SUPFAM:SSF48464 | UniParc:UPI0009DC85FA |
| UniProt:A0A1W0W3U4 | MapMan:16.2.1.5.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:19496459..19502178
Molecular Weight (calculated)
111043.0 Da
IEP (calculated)
6.874
GRAVY (calculated)
-0.625
Length
1026 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEASASTRRS AAGPDPGGAK KPRLAQPPPS RDPRSYAASN GAASAAEQAL VDELLGQYRT ALGELTFNSK PIITNLTIIA GENLQAAKPI AALICANILE
0101: VPSDQKLPSL YLLDSIVKNI GKDYVKHFSA RLPEVFCKAY KQVDPSIHHS MRHLFGTWKG VFPLPPLQMI EKELGFQSSA NGSSSAAPSR TDSQSPRPSN
0201: SIHVNPKYLE ARQHLNQPTK GILGSGAKTS VIADTGDDIE RANRLGTDRS AGRRLEAPDA RPNIQRTQRD PFSNSVHEKQ AGRDVRGLGF SKIPQQAVVG
0301: TGQVRSKPKG QDAIGGPYYA SGVGSSGEQF DRRNNFYASK DVRPSGPVRL DSALLPTPSI NADRVGRPSS NKSWKHSEEE EYVWDDVHSK AAEYGSSNNV
0401: IKGEWMSDDG NAKFASLQRA KWAEAGPVER IDPNTHKLDN LSRFGLAAGQ ERRISAYMDQ EEYLLGKREV EARIDREIRS EGQQFPPPRG SSLWVSQEKT
0501: LPDIGLDPRM PRFSNQPAER STIYTGTMSA SITSSVPVGL SGHYAGRSSL DTANSVPIRS TEAFGQQHRY WSSSPPQAHS PSTAPFARQG SPNPAESDFY
0601: PSRPLSQLAQ NPQEEYSQRA LPVLAKDSHE PSLQATQQTQ KYPTFQSKSH IKPSDPLQAS FSCENSPSLF RPSHLGEVSL PSDSTPISSD LTSASNLLAG
0701: LIKSGFKPNN QSDAKLGPSG SLPVASLSLQ NTAGENTTLH TQAPDTSRPP LPPGLPPPSS TQSADKAAPL SSLLSSLVAK GLISSPASDS SNAVLSQPNK
0801: ASSMNAKVVT ASAVPLPALK PSVGKVSSNS DSSAPTNASL PKAIEIKMGD LIGLEFKPEK LRKYHEHVIS SLFDDQSHLC KTCGNRFRLE EELSLHTSSC
0901: GPREPETIYT GIAPKKWYPS KNFYIDGSHE IEDSTEASDG DLGSTEEVCE FMVPADERQS ICALCGEPFD DIYSFEKGNW MYKDAVFLDY PKEESSCGNN
1001: VEPEEHVPIV HVRCMPRGSN DGMEVN
0101: VPSDQKLPSL YLLDSIVKNI GKDYVKHFSA RLPEVFCKAY KQVDPSIHHS MRHLFGTWKG VFPLPPLQMI EKELGFQSSA NGSSSAAPSR TDSQSPRPSN
0201: SIHVNPKYLE ARQHLNQPTK GILGSGAKTS VIADTGDDIE RANRLGTDRS AGRRLEAPDA RPNIQRTQRD PFSNSVHEKQ AGRDVRGLGF SKIPQQAVVG
0301: TGQVRSKPKG QDAIGGPYYA SGVGSSGEQF DRRNNFYASK DVRPSGPVRL DSALLPTPSI NADRVGRPSS NKSWKHSEEE EYVWDDVHSK AAEYGSSNNV
0401: IKGEWMSDDG NAKFASLQRA KWAEAGPVER IDPNTHKLDN LSRFGLAAGQ ERRISAYMDQ EEYLLGKREV EARIDREIRS EGQQFPPPRG SSLWVSQEKT
0501: LPDIGLDPRM PRFSNQPAER STIYTGTMSA SITSSVPVGL SGHYAGRSSL DTANSVPIRS TEAFGQQHRY WSSSPPQAHS PSTAPFARQG SPNPAESDFY
0601: PSRPLSQLAQ NPQEEYSQRA LPVLAKDSHE PSLQATQQTQ KYPTFQSKSH IKPSDPLQAS FSCENSPSLF RPSHLGEVSL PSDSTPISSD LTSASNLLAG
0701: LIKSGFKPNN QSDAKLGPSG SLPVASLSLQ NTAGENTTLH TQAPDTSRPP LPPGLPPPSS TQSADKAAPL SSLLSSLVAK GLISSPASDS SNAVLSQPNK
0801: ASSMNAKVVT ASAVPLPALK PSVGKVSSNS DSSAPTNASL PKAIEIKMGD LIGLEFKPEK LRKYHEHVIS SLFDDQSHLC KTCGNRFRLE EELSLHTSSC
0901: GPREPETIYT GIAPKKWYPS KNFYIDGSHE IEDSTEASDG DLGSTEEVCE FMVPADERQS ICALCGEPFD DIYSFEKGNW MYKDAVFLDY PKEESSCGNN
1001: VEPEEHVPIV HVRCMPRGSN DGMEVN
001: MENPRRPFDR SRDPGPMKKP RLSEESIRPV NSNARQFLSQ RTLGTATAVT VPPASSRFRV SGRETESSIV SDPSREAYQP QPVHPHYELV NQYKSALAEL
101: TFNSKPIITN LTIIAGENVH AAKAVVTAIC NNILEVPSDQ KLPTLYLLDS IVKNIGRDYI KYFGARLPEV FVKAYRQVDP PMHSNMRHLF GTWKGVFHPQ
201: TLQLIEKELG FNAKSDGSAA VVSTARAEPQ SQRPPHSIHV NPKYLERQRL QQSGRTKGMV TDVPETAPNL TRDSDRLERV SSIASGGSWV GPAKVNNIRR
301: PQRDLLSEPL YEKDIESIAG EYDYASDLPH NSRSVIKNVG SRITDDGCEK QWYGATNRDP DLISDQRDGL HSKSRTSNYA TARVENLESS GPSRNIGVPY
401: DSWKNSEEEE FMWDMHSRLS ETDVATINPK NELHAPDESE RLESENHLLK RPRFSALDPR FDPANSTNSY SSEQKDPSSI GHWAFSSTNA TSTATRKGIQ
501: PQPRVASSGI LPSSGSGSDR QSPLHDSTSK QNVTKQDVRR AHSLPQRDPR ASRFPAKQNV PRDDSVRLPS SSSQFKNTNM RELPVEIFDS KSAAENAPGL
601: TLASEATGQP NMSDLLEAVM KSGILSNNST CGAIKEESHD EVNPGALTLP AASKPKTLPI SLATDNLLAR LKVEQSSAPL VSCAASLTGI TSVQTSKEKS
701: KASDPLSCLL SSLVSKGLIS ASKTELPSAP SITQEHSPDH STNSSMSVSV VPADAQPSVL VKGPSTAPKV KGLAAPSETS KSEPKDLIGL KFRADKIREL
801: HPSVISSLFD DLPHLCTSCS VRLKQKEELD RHMELHDKKK LELSGTNSKC RVWFPKVDNW IAAKAGELEP EYEEVLSEPE SAIEDCQAVA ADETQCACIL
901: CGEVFEDYFS QEMAQWMFKG ASYLTNPPAN SEASGPIVHT GCLTTSSLQS LEVGIAIKQE IVE
101: TFNSKPIITN LTIIAGENVH AAKAVVTAIC NNILEVPSDQ KLPTLYLLDS IVKNIGRDYI KYFGARLPEV FVKAYRQVDP PMHSNMRHLF GTWKGVFHPQ
201: TLQLIEKELG FNAKSDGSAA VVSTARAEPQ SQRPPHSIHV NPKYLERQRL QQSGRTKGMV TDVPETAPNL TRDSDRLERV SSIASGGSWV GPAKVNNIRR
301: PQRDLLSEPL YEKDIESIAG EYDYASDLPH NSRSVIKNVG SRITDDGCEK QWYGATNRDP DLISDQRDGL HSKSRTSNYA TARVENLESS GPSRNIGVPY
401: DSWKNSEEEE FMWDMHSRLS ETDVATINPK NELHAPDESE RLESENHLLK RPRFSALDPR FDPANSTNSY SSEQKDPSSI GHWAFSSTNA TSTATRKGIQ
501: PQPRVASSGI LPSSGSGSDR QSPLHDSTSK QNVTKQDVRR AHSLPQRDPR ASRFPAKQNV PRDDSVRLPS SSSQFKNTNM RELPVEIFDS KSAAENAPGL
601: TLASEATGQP NMSDLLEAVM KSGILSNNST CGAIKEESHD EVNPGALTLP AASKPKTLPI SLATDNLLAR LKVEQSSAPL VSCAASLTGI TSVQTSKEKS
701: KASDPLSCLL SSLVSKGLIS ASKTELPSAP SITQEHSPDH STNSSMSVSV VPADAQPSVL VKGPSTAPKV KGLAAPSETS KSEPKDLIGL KFRADKIREL
801: HPSVISSLFD DLPHLCTSCS VRLKQKEELD RHMELHDKKK LELSGTNSKC RVWFPKVDNW IAAKAGELEP EYEEVLSEPE SAIEDCQAVA ADETQCACIL
901: CGEVFEDYFS QEMAQWMFKG ASYLTNPPAN SEASGPIVHT GCLTTSSLQS LEVGIAIKQE IVE
Arabidopsis Description
ENTH/VHS family protein [Source:TAIR;Acc:AT2G36480]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.