Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 35.56 | 46.48 |
| GSMUA_Achr11P... | Banana | nucleus | 37.61 | 42.88 |
| VIT_08s0007g03880.t01 | Wine grape | nucleus | 30.34 | 32.75 |
| PGSC0003DMT400007032 | Potato | nucleus | 27.69 | 30.98 |
| Solyc09g009120.2.1 | Tomato | nucleus | 27.27 | 30.58 |
| Os09t0566100-01 | Rice | nucleus | 27.78 | 30.4 |
| KRH32653 | Soybean | nucleus | 25.13 | 30.15 |
| TraesCS4D01G010100.1 | Wheat | plastid | 25.38 | 29.76 |
| OQU89013 | Sorghum | nucleus | 25.47 | 29.04 |
| KRG96135 | Soybean | nucleus | 24.53 | 28.79 |
| AT2G36480.1 | Thale cress | nucleus | 23.68 | 28.76 |
| KRH67849 | Soybean | nucleus | 24.7 | 27.95 |
| KRG96139 | Soybean | nucleus | 24.44 | 27.77 |
| GSMUA_Achr6P18930_001 | Banana | nucleus | 19.4 | 27.62 |
| TraesCS4A01G301900.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 21.03 | 27.58 |
| CDY33156 | Canola | nucleus | 18.8 | 26.7 |
| Bra005265.1-P | Field mustard | nucleus, plastid | 22.65 | 26.53 |
| CDX75035 | Canola | nucleus | 22.82 | 26.36 |
| HORVU4Hr1G001840.2 | Barley | nucleus | 24.87 | 26.22 |
| Solyc10g083590.1.1 | Tomato | nucleus | 24.53 | 26.04 |
| Zm00001d019856_P005 | Maize | plastid | 24.53 | 26.0 |
| Zm00001d005350_P005 | Maize | plastid | 25.64 | 25.84 |
| TraesCS4B01G012000.1 | Wheat | cytosol | 17.35 | 24.61 |
| CDY69913 | Canola | nucleus | 13.25 | 21.62 |
Protein Annotations
| Gene3D:1.25.40.90 | MapMan:16.2.1.5.2 | InterPro:CID_dom | InterPro:ENTH_VHS | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | EnsemblPlantsGene:GSMUA_Achr3G22800_001 | EnsemblPlants:GSMUA_Achr3P22800_001 | EnsemblPlants:GSMUA_Achr3T22800_001 | InterPro:IPR006569 | InterPro:IPR008942 |
| InterPro:IPR013087 | UniProt:M0SGZ6 | PFAM:PF04818 | ScanProsite:PS00028 | PFscan:PS50157 | PFscan:PS51391 |
| PANTHER:PTHR15921 | PANTHER:PTHR15921:SF5 | InterPro:RNA_pol_II-bd | SMART:SM00582 | SUPFAM:SSF48464 | UniParc:UPI0002952B61 |
| InterPro:Znf_C2H2_type | SEG:seg | : | : | : | : |
Description
Putative uncharacterized protein Sb02g011680 [Source:GMGC_GENE;Acc:GSMUA_Achr3G22800_001]
Coordinates
chr3:+:23644784..23651153
Molecular Weight (calculated)
127453.0 Da
IEP (calculated)
8.023
GRAVY (calculated)
-0.496
Length
1170 amino acids
Sequence
(BLAST)
(BLAST)
0001: MENSRRSAMD RSREPGLKRP RLAAANAADR GRVASNRDRT LPPLRTGGQT LAPRAGERQE RDDVVRRGSH QELVAQYKTA LAELTFNSKP IITNLTIIAG
0101: ESLHAAKEIA ALICANVLEI DKCLGIIFSS KGYVLLHGFK FVDDAPSGQK LPSLYLLDSI VKNIGKDYIK YFAARLPEVF CKAFKQVESS IHPSMKHLFG
0201: TWKGVFPLAP LQIIEKELGF PPVINGSSGS ASSKLDSQPQ RPAHSIHVNP KYLEARQRLQ QSPRVSQSSM SLDVKGFIVS TFTLCCSSVS RISYNSFLLT
0301: VEIPRFLQVS WSICGRRKIK PTDNMQQPQK ELVNNVICEK KGLKDVRDHV YASDISRESD PGIGRVSERL KDRDEHDKTY YGAGMAATEA QLNRRKGFDV
0401: NHSNGSNQVS GSANASAQLT SVDLVDTDRS KLEASRSWKI SEEEEYLWDE MKTRKTDYGG INYLQKVGWN NNKADKTASL GRGKWIPLES GHVESNVNKV
0501: DAFSQLVKTA KGEGRVLAYE SLGDYLPPLH AKQDTDLGFS MEASSNSLLQ QRASSENHSS SFWPSHEASQ SVVGSNYKGS SVGQLKEQSI SFSGGSSTST
0601: SSSLPLPGLR SSVLSSNLSS YVHIPGSSGT SGQQRPQPLR PPSLSSQLPP SSVHIQQGKP HDSIDHNHFQ SHSFSQVDQK ALHLGGQQNQ VQHLPGSPSN
0701: FLAKNHAQPS LSSSITSLSD VSQQLDGLIN AANRLSSRDH LPLTQQSQHN LSKWQTENQP QPAKPQPPLQ SVTQSQTEKP PLLPLAIGAH WSGKDSGMSY
0801: SNNAAVDVST PPTTSSLLTA IMNGGLFPKN SVSGFQKASI QPPLPIGPPP VQALTSTAPS DTPSLLAPIS LGNIPDNSKT SDPNVNSLSS LLSSLVAKGL
0901: IASSSTELPT VSAAQSSNKV PDQSSVFASK SLEQIPPILT TSSTPPTLAE EPAASKSVES GMLSLSNAAE PKDIGIEFKS EILRGFHPSV IRSLLDDLVH
1001: QCHICGLRLR LQEQLQCHLD WHVSQKSVIS NFNPKSRKWF SNRTNWLDGS MRPESRHLEA AIFLEEVVPI KEKSEPMVPA DESQSICALC GEPFEDIYSE
1101: ATDEWMYKGT VYLNLPSKQD DANNMDGTAG KSLIVHAQCT IQRSADDTDI VEHDKVDQPC APRQPNLNSG
0101: ESLHAAKEIA ALICANVLEI DKCLGIIFSS KGYVLLHGFK FVDDAPSGQK LPSLYLLDSI VKNIGKDYIK YFAARLPEVF CKAFKQVESS IHPSMKHLFG
0201: TWKGVFPLAP LQIIEKELGF PPVINGSSGS ASSKLDSQPQ RPAHSIHVNP KYLEARQRLQ QSPRVSQSSM SLDVKGFIVS TFTLCCSSVS RISYNSFLLT
0301: VEIPRFLQVS WSICGRRKIK PTDNMQQPQK ELVNNVICEK KGLKDVRDHV YASDISRESD PGIGRVSERL KDRDEHDKTY YGAGMAATEA QLNRRKGFDV
0401: NHSNGSNQVS GSANASAQLT SVDLVDTDRS KLEASRSWKI SEEEEYLWDE MKTRKTDYGG INYLQKVGWN NNKADKTASL GRGKWIPLES GHVESNVNKV
0501: DAFSQLVKTA KGEGRVLAYE SLGDYLPPLH AKQDTDLGFS MEASSNSLLQ QRASSENHSS SFWPSHEASQ SVVGSNYKGS SVGQLKEQSI SFSGGSSTST
0601: SSSLPLPGLR SSVLSSNLSS YVHIPGSSGT SGQQRPQPLR PPSLSSQLPP SSVHIQQGKP HDSIDHNHFQ SHSFSQVDQK ALHLGGQQNQ VQHLPGSPSN
0701: FLAKNHAQPS LSSSITSLSD VSQQLDGLIN AANRLSSRDH LPLTQQSQHN LSKWQTENQP QPAKPQPPLQ SVTQSQTEKP PLLPLAIGAH WSGKDSGMSY
0801: SNNAAVDVST PPTTSSLLTA IMNGGLFPKN SVSGFQKASI QPPLPIGPPP VQALTSTAPS DTPSLLAPIS LGNIPDNSKT SDPNVNSLSS LLSSLVAKGL
0901: IASSSTELPT VSAAQSSNKV PDQSSVFASK SLEQIPPILT TSSTPPTLAE EPAASKSVES GMLSLSNAAE PKDIGIEFKS EILRGFHPSV IRSLLDDLVH
1001: QCHICGLRLR LQEQLQCHLD WHVSQKSVIS NFNPKSRKWF SNRTNWLDGS MRPESRHLEA AIFLEEVVPI KEKSEPMVPA DESQSICALC GEPFEDIYSE
1101: ATDEWMYKGT VYLNLPSKQD DANNMDGTAG KSLIVHAQCT IQRSADDTDI VEHDKVDQPC APRQPNLNSG
001: MENPRRPFDR SRDPGPMKKP RLSEESIRPV NSNARQFLSQ RTLGTATAVT VPPASSRFRV SGRETESSIV SDPSREAYQP QPVHPHYELV NQYKSALAEL
101: TFNSKPIITN LTIIAGENVH AAKAVVTAIC NNILEVPSDQ KLPTLYLLDS IVKNIGRDYI KYFGARLPEV FVKAYRQVDP PMHSNMRHLF GTWKGVFHPQ
201: TLQLIEKELG FNAKSDGSAA VVSTARAEPQ SQRPPHSIHV NPKYLERQRL QQSGRTKGMV TDVPETAPNL TRDSDRLERV SSIASGGSWV GPAKVNNIRR
301: PQRDLLSEPL YEKDIESIAG EYDYASDLPH NSRSVIKNVG SRITDDGCEK QWYGATNRDP DLISDQRDGL HSKSRTSNYA TARVENLESS GPSRNIGVPY
401: DSWKNSEEEE FMWDMHSRLS ETDVATINPK NELHAPDESE RLESENHLLK RPRFSALDPR FDPANSTNSY SSEQKDPSSI GHWAFSSTNA TSTATRKGIQ
501: PQPRVASSGI LPSSGSGSDR QSPLHDSTSK QNVTKQDVRR AHSLPQRDPR ASRFPAKQNV PRDDSVRLPS SSSQFKNTNM RELPVEIFDS KSAAENAPGL
601: TLASEATGQP NMSDLLEAVM KSGILSNNST CGAIKEESHD EVNPGALTLP AASKPKTLPI SLATDNLLAR LKVEQSSAPL VSCAASLTGI TSVQTSKEKS
701: KASDPLSCLL SSLVSKGLIS ASKTELPSAP SITQEHSPDH STNSSMSVSV VPADAQPSVL VKGPSTAPKV KGLAAPSETS KSEPKDLIGL KFRADKIREL
801: HPSVISSLFD DLPHLCTSCS VRLKQKEELD RHMELHDKKK LELSGTNSKC RVWFPKVDNW IAAKAGELEP EYEEVLSEPE SAIEDCQAVA ADETQCACIL
901: CGEVFEDYFS QEMAQWMFKG ASYLTNPPAN SEASGPIVHT GCLTTSSLQS LEVGIAIKQE IVE
101: TFNSKPIITN LTIIAGENVH AAKAVVTAIC NNILEVPSDQ KLPTLYLLDS IVKNIGRDYI KYFGARLPEV FVKAYRQVDP PMHSNMRHLF GTWKGVFHPQ
201: TLQLIEKELG FNAKSDGSAA VVSTARAEPQ SQRPPHSIHV NPKYLERQRL QQSGRTKGMV TDVPETAPNL TRDSDRLERV SSIASGGSWV GPAKVNNIRR
301: PQRDLLSEPL YEKDIESIAG EYDYASDLPH NSRSVIKNVG SRITDDGCEK QWYGATNRDP DLISDQRDGL HSKSRTSNYA TARVENLESS GPSRNIGVPY
401: DSWKNSEEEE FMWDMHSRLS ETDVATINPK NELHAPDESE RLESENHLLK RPRFSALDPR FDPANSTNSY SSEQKDPSSI GHWAFSSTNA TSTATRKGIQ
501: PQPRVASSGI LPSSGSGSDR QSPLHDSTSK QNVTKQDVRR AHSLPQRDPR ASRFPAKQNV PRDDSVRLPS SSSQFKNTNM RELPVEIFDS KSAAENAPGL
601: TLASEATGQP NMSDLLEAVM KSGILSNNST CGAIKEESHD EVNPGALTLP AASKPKTLPI SLATDNLLAR LKVEQSSAPL VSCAASLTGI TSVQTSKEKS
701: KASDPLSCLL SSLVSKGLIS ASKTELPSAP SITQEHSPDH STNSSMSVSV VPADAQPSVL VKGPSTAPKV KGLAAPSETS KSEPKDLIGL KFRADKIREL
801: HPSVISSLFD DLPHLCTSCS VRLKQKEELD RHMELHDKKK LELSGTNSKC RVWFPKVDNW IAAKAGELEP EYEEVLSEPE SAIEDCQAVA ADETQCACIL
901: CGEVFEDYFS QEMAQWMFKG ASYLTNPPAN SEASGPIVHT GCLTTSSLQS LEVGIAIKQE IVE
Arabidopsis Description
ENTH/VHS family protein [Source:TAIR;Acc:AT2G36480]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.