Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 44.8 | 39.08 |
| GSMUA_Achr3P22800_001 | Banana | nucleus | 46.48 | 35.56 |
| KRH32653 | Soybean | nucleus | 33.85 | 31.08 |
| VIT_08s0007g03880.t01 | Wine grape | nucleus | 37.21 | 30.72 |
| Os09t0566100-01 | Rice | nucleus | 35.75 | 29.93 |
| KRG96135 | Soybean | nucleus | 32.96 | 29.59 |
| TraesCS4D01G010100.1 | Wheat | plastid | 32.18 | 28.86 |
| KRG96139 | Soybean | nucleus | 32.85 | 28.54 |
| AT2G36480.1 | Thale cress | nucleus | 30.39 | 28.25 |
| PGSC0003DMT400007032 | Potato | nucleus | 32.96 | 28.2 |
| KRH67849 | Soybean | nucleus | 32.51 | 28.14 |
| CDY33156 | Canola | nucleus | 25.7 | 27.91 |
| Solyc09g009120.2.1 | Tomato | nucleus | 31.84 | 27.32 |
| OQU89013 | Sorghum | nucleus | 31.17 | 27.19 |
| TraesCS4A01G301900.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 26.93 | 27.02 |
| Bra005265.1-P | Field mustard | nucleus, plastid | 30.06 | 26.93 |
| GSMUA_Achr6P18930_001 | Banana | nucleus | 24.69 | 26.89 |
| CDX75035 | Canola | nucleus | 30.28 | 26.75 |
| HORVU4Hr1G001840.2 | Barley | nucleus | 32.63 | 26.31 |
| TraesCS4B01G012000.1 | Wheat | cytosol | 22.68 | 24.61 |
| Zm00001d005350_P005 | Maize | plastid | 31.73 | 24.46 |
| Zm00001d019856_P005 | Maize | plastid | 29.94 | 24.28 |
| Solyc10g083590.1.1 | Tomato | nucleus | 29.27 | 23.77 |
| CDY69913 | Canola | nucleus | 15.75 | 19.67 |
Protein Annotations
| Gene3D:1.25.40.90 | MapMan:16.2.1.5.2 | InterPro:CID_dom | InterPro:ENTH_VHS | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | EnsemblPlantsGene:GSMUA_Achr10G10200_001 | EnsemblPlants:GSMUA_Achr10P10200_001 | EnsemblPlants:GSMUA_Achr10T10200_001 | InterPro:IPR006569 | InterPro:IPR008942 |
| InterPro:IPR013087 | UniProt:M0RGZ6 | PFAM:PF04818 | ScanProsite:PS00028 | PFscan:PS50157 | PFscan:PS51391 |
| PANTHER:PTHR15921 | PANTHER:PTHR15921:SF5 | InterPro:RNA_pol_II-bd | SMART:SM00582 | SUPFAM:SSF48464 | UniParc:UPI000294ADD9 |
| InterPro:Znf_C2H2_type | SEG:seg | : | : | : | : |
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr10G10200_001]
Coordinates
chr10:-:19830710..19837751
Molecular Weight (calculated)
100253.0 Da
IEP (calculated)
6.726
GRAVY (calculated)
-0.535
Length
895 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSRRSAMD RSREPGLKRP RLAAEDAAER DRAAVSTKRD PRLRAVGQPL DPRVPRPPRV GDREGSDDAP RGGSHQELVA QYKTALAELT FNSKPIITNL
101: TIIAGESLHA AREIAAVVCA NILEVPNEQK LPSLYLLDSI VKNIGRDYIK CFAARLPEVF CKAYKQVDSS IHSSMRHLFG TWRGVFPPAS LQIIEKELDF
201: PPITNGSSKS ESSKLDSQPQ RPAHSIHVNP KYLEARQRLQ QSSRVSIRIY RKSRMWKMVN ESVSHLVSKM AKGWKAEKED LFLDGSPYMD QTVSLALVQN
301: QAQRLVTNLA DLQWVSLLLI LCSAEEFAEG QPTYLNVQCP QQEFINNVIH DKKRLKVIRD HEYSSDLSQE LDLGIGRVGE RLKDGDGHNN AGTNFTEAQL
401: NRMNEFDVNH FYDNYQVSGS RRSNTLLSSV DLGDRDRSKL EASRSWKNSE EEEYMWDDMK TGTEYGGTNN SLKGDWHNAD ADRSQDFFEK LRPSSAVYDT
501: NLGLRTEASS NSLSQRKASS EHHSSSFWTS HELPASLVGL DKNCSRAGQP EGQSLSFSAG LSTSISSSLP LPGLCSSVPW ILFQVKVMLN HLVHPNQRLL
601: STLKTYLILL PQHPIISQGI VPLSYSNHNI IYLNGRQQHS LSPLELKPRL NLPFGPPQFG DTIPPLPPGP PPPSSSSVAV NSDNSKTSGA NVNSLSSLLS
701: SLVAKGLISS SSTDAAELKN LVGFEFKSEI MRRFHPLVLT SLFDDLKHQC NICGLRFRLQ EQLQCHLDWH APKKSEMSNF NQTYRKWFPE MRDWVNGPVG
801: PQSSLEAAIS LEEVAPYEEE SEPMVPADES QCLCALCGEP FEDIFSESRD EWMYKGTVYL ELQNKQDTTS NMDGPADQLP IVHAHCMSQW STRHC
101: TIIAGESLHA AREIAAVVCA NILEVPNEQK LPSLYLLDSI VKNIGRDYIK CFAARLPEVF CKAYKQVDSS IHSSMRHLFG TWRGVFPPAS LQIIEKELDF
201: PPITNGSSKS ESSKLDSQPQ RPAHSIHVNP KYLEARQRLQ QSSRVSIRIY RKSRMWKMVN ESVSHLVSKM AKGWKAEKED LFLDGSPYMD QTVSLALVQN
301: QAQRLVTNLA DLQWVSLLLI LCSAEEFAEG QPTYLNVQCP QQEFINNVIH DKKRLKVIRD HEYSSDLSQE LDLGIGRVGE RLKDGDGHNN AGTNFTEAQL
401: NRMNEFDVNH FYDNYQVSGS RRSNTLLSSV DLGDRDRSKL EASRSWKNSE EEEYMWDDMK TGTEYGGTNN SLKGDWHNAD ADRSQDFFEK LRPSSAVYDT
501: NLGLRTEASS NSLSQRKASS EHHSSSFWTS HELPASLVGL DKNCSRAGQP EGQSLSFSAG LSTSISSSLP LPGLCSSVPW ILFQVKVMLN HLVHPNQRLL
601: STLKTYLILL PQHPIISQGI VPLSYSNHNI IYLNGRQQHS LSPLELKPRL NLPFGPPQFG DTIPPLPPGP PPPSSSSVAV NSDNSKTSGA NVNSLSSLLS
701: SLVAKGLISS SSTDAAELKN LVGFEFKSEI MRRFHPLVLT SLFDDLKHQC NICGLRFRLQ EQLQCHLDWH APKKSEMSNF NQTYRKWFPE MRDWVNGPVG
801: PQSSLEAAIS LEEVAPYEEE SEPMVPADES QCLCALCGEP FEDIFSESRD EWMYKGTVYL ELQNKQDTTS NMDGPADQLP IVHAHCMSQW STRHC
001: MENPRRPFDR SRDPGPMKKP RLSEESIRPV NSNARQFLSQ RTLGTATAVT VPPASSRFRV SGRETESSIV SDPSREAYQP QPVHPHYELV NQYKSALAEL
101: TFNSKPIITN LTIIAGENVH AAKAVVTAIC NNILEVPSDQ KLPTLYLLDS IVKNIGRDYI KYFGARLPEV FVKAYRQVDP PMHSNMRHLF GTWKGVFHPQ
201: TLQLIEKELG FNAKSDGSAA VVSTARAEPQ SQRPPHSIHV NPKYLERQRL QQSGRTKGMV TDVPETAPNL TRDSDRLERV SSIASGGSWV GPAKVNNIRR
301: PQRDLLSEPL YEKDIESIAG EYDYASDLPH NSRSVIKNVG SRITDDGCEK QWYGATNRDP DLISDQRDGL HSKSRTSNYA TARVENLESS GPSRNIGVPY
401: DSWKNSEEEE FMWDMHSRLS ETDVATINPK NELHAPDESE RLESENHLLK RPRFSALDPR FDPANSTNSY SSEQKDPSSI GHWAFSSTNA TSTATRKGIQ
501: PQPRVASSGI LPSSGSGSDR QSPLHDSTSK QNVTKQDVRR AHSLPQRDPR ASRFPAKQNV PRDDSVRLPS SSSQFKNTNM RELPVEIFDS KSAAENAPGL
601: TLASEATGQP NMSDLLEAVM KSGILSNNST CGAIKEESHD EVNPGALTLP AASKPKTLPI SLATDNLLAR LKVEQSSAPL VSCAASLTGI TSVQTSKEKS
701: KASDPLSCLL SSLVSKGLIS ASKTELPSAP SITQEHSPDH STNSSMSVSV VPADAQPSVL VKGPSTAPKV KGLAAPSETS KSEPKDLIGL KFRADKIREL
801: HPSVISSLFD DLPHLCTSCS VRLKQKEELD RHMELHDKKK LELSGTNSKC RVWFPKVDNW IAAKAGELEP EYEEVLSEPE SAIEDCQAVA ADETQCACIL
901: CGEVFEDYFS QEMAQWMFKG ASYLTNPPAN SEASGPIVHT GCLTTSSLQS LEVGIAIKQE IVE
101: TFNSKPIITN LTIIAGENVH AAKAVVTAIC NNILEVPSDQ KLPTLYLLDS IVKNIGRDYI KYFGARLPEV FVKAYRQVDP PMHSNMRHLF GTWKGVFHPQ
201: TLQLIEKELG FNAKSDGSAA VVSTARAEPQ SQRPPHSIHV NPKYLERQRL QQSGRTKGMV TDVPETAPNL TRDSDRLERV SSIASGGSWV GPAKVNNIRR
301: PQRDLLSEPL YEKDIESIAG EYDYASDLPH NSRSVIKNVG SRITDDGCEK QWYGATNRDP DLISDQRDGL HSKSRTSNYA TARVENLESS GPSRNIGVPY
401: DSWKNSEEEE FMWDMHSRLS ETDVATINPK NELHAPDESE RLESENHLLK RPRFSALDPR FDPANSTNSY SSEQKDPSSI GHWAFSSTNA TSTATRKGIQ
501: PQPRVASSGI LPSSGSGSDR QSPLHDSTSK QNVTKQDVRR AHSLPQRDPR ASRFPAKQNV PRDDSVRLPS SSSQFKNTNM RELPVEIFDS KSAAENAPGL
601: TLASEATGQP NMSDLLEAVM KSGILSNNST CGAIKEESHD EVNPGALTLP AASKPKTLPI SLATDNLLAR LKVEQSSAPL VSCAASLTGI TSVQTSKEKS
701: KASDPLSCLL SSLVSKGLIS ASKTELPSAP SITQEHSPDH STNSSMSVSV VPADAQPSVL VKGPSTAPKV KGLAAPSETS KSEPKDLIGL KFRADKIREL
801: HPSVISSLFD DLPHLCTSCS VRLKQKEELD RHMELHDKKK LELSGTNSKC RVWFPKVDNW IAAKAGELEP EYEEVLSEPE SAIEDCQAVA ADETQCACIL
901: CGEVFEDYFS QEMAQWMFKG ASYLTNPPAN SEASGPIVHT GCLTTSSLQS LEVGIAIKQE IVE
Arabidopsis Description
ENTH/VHS family protein [Source:TAIR;Acc:AT2G36480]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.