Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G301900.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 78.76 | 88.12 |
| TraesCS4B01G012000.1 | Wheat | cytosol | 72.75 | 88.0 |
| HORVU4Hr1G001840.2 | Barley | nucleus | 87.78 | 78.92 |
| Os09t0566100-01 | Rice | nucleus | 54.81 | 51.17 |
| OQU89013 | Sorghum | nucleus | 48.4 | 47.08 |
| Zm00001d019856_P005 | Maize | plastid | 45.49 | 41.12 |
| Zm00001d005350_P005 | Maize | plastid | 47.6 | 40.91 |
| GSMUA_Achr10P... | Banana | nucleus | 28.86 | 32.18 |
| KRH32653 | Soybean | nucleus | 28.36 | 29.03 |
| VIT_08s0007g03880.t01 | Wine grape | nucleus | 30.76 | 28.32 |
| PGSC0003DMT400007032 | Potato | nucleus | 29.26 | 27.92 |
| KRG96135 | Soybean | nucleus | 27.86 | 27.88 |
| Solyc09g009120.2.1 | Tomato | nucleus | 29.06 | 27.8 |
| GSMUA_Achr11P... | Banana | nucleus | 28.16 | 27.39 |
| AT2G36480.1 | Thale cress | nucleus | 26.15 | 27.1 |
| CDY33156 | Canola | nucleus | 22.34 | 27.06 |
| CDX75035 | Canola | nucleus | 27.15 | 26.75 |
| Bra005265.1-P | Field mustard | nucleus, plastid | 26.75 | 26.73 |
| KRG96139 | Soybean | nucleus | 27.25 | 26.41 |
| KRH67849 | Soybean | nucleus | 27.25 | 26.31 |
| GSMUA_Achr3P22800_001 | Banana | nucleus | 29.76 | 25.38 |
| TraesCS7D01G290300.2 | Wheat | nucleus | 22.55 | 24.14 |
| Solyc10g083590.1.1 | Tomato | nucleus | 26.65 | 24.14 |
| CDY69913 | Canola | nucleus | 13.63 | 18.97 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G010100.1 | EnsemblPlantsGene:TraesCS4D01G010100 | Gene3D:1.25.40.90 | InterPro:CID_dom | InterPro:ENTH_VHS | InterPro:IPR006569 |
| InterPro:IPR008942 | InterPro:RNA_pol_II-bd | PANTHER:PTHR15921 | PANTHER:PTHR15921:SF5 | PFAM:PF04818 | PFscan:PS51391 |
| SEG:seg | SMART:SM00582 | SUPFAM:SSF48464 | TIGR:cd03562 | MapMan:16.2.1.5.2 | : |
Description
No Description!
Coordinates
chr4D:-:4759726..4765606
Molecular Weight (calculated)
107802.0 Da
IEP (calculated)
7.248
GRAVY (calculated)
-0.649
Length
998 amino acids
Sequence
(BLAST)
(BLAST)
001: MRASMEASAA AARRSAAPDP PGAAKKQRLL APPRDPRSSS AAYGGGGGAS NGSGAAAAAA AEQQAQVDEL VAQYRTALGE LTFNSKPIIT NLTIIAGENL
101: HAARSIAALV CANILEVPSD QKLPSLYLLD SIVKNIGKDY VKHFSSKLPE VFCKAYRQVD PPVHTSMRHL FGTWKGVFSP ASLQMIEKEL GFQSSANGSS
201: GAAPSKADSP SQRPSHSIHV NPKYLEARQQ LQQPNKGILG AGAKTPIISD ADDVIERGNR IGIDKGTGRR LDTLNSRPRA QKDTFSNPIH EKPERDVRGP
301: GIAGAGQVRS KPKGQDGIVG AYYTGAVGSP EEIFDRRNHL YATKDARSSG SVRLDSALLP TPVSNSERIG RLSSSDKSWK NSEEEEYIWD DIRTQGADYG
401: GASSARKGEP LADDVNIRSF HRANWAEPGD PLDPDFHKQD AIPRFGHPTS QDRRLAPYMD HAEYLHSKRD GDPRIDREMW PEGQPFPESR GSSVWLSQEK
501: PRPDIGRDPR ISRFSNQSPS ITSSVPVGLS GAYAGRSSLE SAKQKYWPPS SPPLQARESS PSSSEHDIYA SRPFLPLGQT PQEEHNQRAH ALPQNSANSQ
601: GRPSLQATLS QASQQTQKHP PVQSKPHPKP FHQPFSQENS SSLFRPSVHL TLSTGMEEQP EEVSLPSGPA HAKSDQISAS NLLAGLFKGG FIPNTSDHAV
701: PHSHGLASLP SSSASENAPL KPHAPNSLRP PLPPGPPPTH SAEKAAAPLS SLLSSLVAKG LISSPSTDSA AVARKPGKSS PSTSDVSASA PPRPIVQPSV
801: AKETPAPVKA LLPQPPKVEM ADLIGLEFKP VVLREHRTEV VNRLFDDQSH QCRTCGLRFR LEDELSAHTA CNGPEEARNT GIAPERWYPS KSRWIDRLPE
901: PQSIFLDSAS DSDLGTAEEV CEFMVPADES QIICCLCGEQ FDDMYSIDRS EWMYKDAVYY DRLKAEGGSG GSSQSKELVP IVHARCMPRI SNDGMEVD
101: HAARSIAALV CANILEVPSD QKLPSLYLLD SIVKNIGKDY VKHFSSKLPE VFCKAYRQVD PPVHTSMRHL FGTWKGVFSP ASLQMIEKEL GFQSSANGSS
201: GAAPSKADSP SQRPSHSIHV NPKYLEARQQ LQQPNKGILG AGAKTPIISD ADDVIERGNR IGIDKGTGRR LDTLNSRPRA QKDTFSNPIH EKPERDVRGP
301: GIAGAGQVRS KPKGQDGIVG AYYTGAVGSP EEIFDRRNHL YATKDARSSG SVRLDSALLP TPVSNSERIG RLSSSDKSWK NSEEEEYIWD DIRTQGADYG
401: GASSARKGEP LADDVNIRSF HRANWAEPGD PLDPDFHKQD AIPRFGHPTS QDRRLAPYMD HAEYLHSKRD GDPRIDREMW PEGQPFPESR GSSVWLSQEK
501: PRPDIGRDPR ISRFSNQSPS ITSSVPVGLS GAYAGRSSLE SAKQKYWPPS SPPLQARESS PSSSEHDIYA SRPFLPLGQT PQEEHNQRAH ALPQNSANSQ
601: GRPSLQATLS QASQQTQKHP PVQSKPHPKP FHQPFSQENS SSLFRPSVHL TLSTGMEEQP EEVSLPSGPA HAKSDQISAS NLLAGLFKGG FIPNTSDHAV
701: PHSHGLASLP SSSASENAPL KPHAPNSLRP PLPPGPPPTH SAEKAAAPLS SLLSSLVAKG LISSPSTDSA AVARKPGKSS PSTSDVSASA PPRPIVQPSV
801: AKETPAPVKA LLPQPPKVEM ADLIGLEFKP VVLREHRTEV VNRLFDDQSH QCRTCGLRFR LEDELSAHTA CNGPEEARNT GIAPERWYPS KSRWIDRLPE
901: PQSIFLDSAS DSDLGTAEEV CEFMVPADES QIICCLCGEQ FDDMYSIDRS EWMYKDAVYY DRLKAEGGSG GSSQSKELVP IVHARCMPRI SNDGMEVD
001: MENPRRPFDR SRDPGPMKKP RLSEESIRPV NSNARQFLSQ RTLGTATAVT VPPASSRFRV SGRETESSIV SDPSREAYQP QPVHPHYELV NQYKSALAEL
101: TFNSKPIITN LTIIAGENVH AAKAVVTAIC NNILEVPSDQ KLPTLYLLDS IVKNIGRDYI KYFGARLPEV FVKAYRQVDP PMHSNMRHLF GTWKGVFHPQ
201: TLQLIEKELG FNAKSDGSAA VVSTARAEPQ SQRPPHSIHV NPKYLERQRL QQSGRTKGMV TDVPETAPNL TRDSDRLERV SSIASGGSWV GPAKVNNIRR
301: PQRDLLSEPL YEKDIESIAG EYDYASDLPH NSRSVIKNVG SRITDDGCEK QWYGATNRDP DLISDQRDGL HSKSRTSNYA TARVENLESS GPSRNIGVPY
401: DSWKNSEEEE FMWDMHSRLS ETDVATINPK NELHAPDESE RLESENHLLK RPRFSALDPR FDPANSTNSY SSEQKDPSSI GHWAFSSTNA TSTATRKGIQ
501: PQPRVASSGI LPSSGSGSDR QSPLHDSTSK QNVTKQDVRR AHSLPQRDPR ASRFPAKQNV PRDDSVRLPS SSSQFKNTNM RELPVEIFDS KSAAENAPGL
601: TLASEATGQP NMSDLLEAVM KSGILSNNST CGAIKEESHD EVNPGALTLP AASKPKTLPI SLATDNLLAR LKVEQSSAPL VSCAASLTGI TSVQTSKEKS
701: KASDPLSCLL SSLVSKGLIS ASKTELPSAP SITQEHSPDH STNSSMSVSV VPADAQPSVL VKGPSTAPKV KGLAAPSETS KSEPKDLIGL KFRADKIREL
801: HPSVISSLFD DLPHLCTSCS VRLKQKEELD RHMELHDKKK LELSGTNSKC RVWFPKVDNW IAAKAGELEP EYEEVLSEPE SAIEDCQAVA ADETQCACIL
901: CGEVFEDYFS QEMAQWMFKG ASYLTNPPAN SEASGPIVHT GCLTTSSLQS LEVGIAIKQE IVE
101: TFNSKPIITN LTIIAGENVH AAKAVVTAIC NNILEVPSDQ KLPTLYLLDS IVKNIGRDYI KYFGARLPEV FVKAYRQVDP PMHSNMRHLF GTWKGVFHPQ
201: TLQLIEKELG FNAKSDGSAA VVSTARAEPQ SQRPPHSIHV NPKYLERQRL QQSGRTKGMV TDVPETAPNL TRDSDRLERV SSIASGGSWV GPAKVNNIRR
301: PQRDLLSEPL YEKDIESIAG EYDYASDLPH NSRSVIKNVG SRITDDGCEK QWYGATNRDP DLISDQRDGL HSKSRTSNYA TARVENLESS GPSRNIGVPY
401: DSWKNSEEEE FMWDMHSRLS ETDVATINPK NELHAPDESE RLESENHLLK RPRFSALDPR FDPANSTNSY SSEQKDPSSI GHWAFSSTNA TSTATRKGIQ
501: PQPRVASSGI LPSSGSGSDR QSPLHDSTSK QNVTKQDVRR AHSLPQRDPR ASRFPAKQNV PRDDSVRLPS SSSQFKNTNM RELPVEIFDS KSAAENAPGL
601: TLASEATGQP NMSDLLEAVM KSGILSNNST CGAIKEESHD EVNPGALTLP AASKPKTLPI SLATDNLLAR LKVEQSSAPL VSCAASLTGI TSVQTSKEKS
701: KASDPLSCLL SSLVSKGLIS ASKTELPSAP SITQEHSPDH STNSSMSVSV VPADAQPSVL VKGPSTAPKV KGLAAPSETS KSEPKDLIGL KFRADKIREL
801: HPSVISSLFD DLPHLCTSCS VRLKQKEELD RHMELHDKKK LELSGTNSKC RVWFPKVDNW IAAKAGELEP EYEEVLSEPE SAIEDCQAVA ADETQCACIL
901: CGEVFEDYFS QEMAQWMFKG ASYLTNPPAN SEASGPIVHT GCLTTSSLQS LEVGIAIKQE IVE
Arabidopsis Description
ENTH/VHS family protein [Source:TAIR;Acc:AT2G36480]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.