Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33156 | Canola | nucleus | 46.03 | 40.05 |
| AT2G36480.1 | Thale cress | nucleus | 51.33 | 38.21 |
| CDX75035 | Canola | nucleus | 46.44 | 32.87 |
| VIT_08s0007g03880.t01 | Wine grape | nucleus | 28.59 | 18.91 |
| CDX96143 | Canola | nucleus | 10.74 | 18.78 |
| CDY36205 | Canola | nucleus | 10.18 | 17.46 |
| KRH32653 | Soybean | nucleus | 23.15 | 17.03 |
| PGSC0003DMT400007032 | Potato | nucleus | 24.83 | 17.02 |
| Solyc09g009120.2.1 | Tomato | nucleus | 23.43 | 16.11 |
| TraesCS4B01G012000.1 | Wheat | cytosol | 18.41 | 16.0 |
| TraesCS4A01G301900.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 19.8 | 15.92 |
| KRG96139 | Soybean | nucleus | 22.73 | 15.83 |
| GSMUA_Achr10P... | Banana | nucleus | 19.67 | 15.75 |
| KRG96135 | Soybean | nucleus | 21.76 | 15.65 |
| KRH67849 | Soybean | nucleus | 22.18 | 15.38 |
| CDY16640 | Canola | nucleus | 15.48 | 14.34 |
| CDX94585 | Canola | nucleus | 14.92 | 14.08 |
| Os09t0566100-01 | Rice | nucleus | 20.5 | 13.75 |
| TraesCS4D01G010100.1 | Wheat | plastid | 18.97 | 13.63 |
| Solyc10g083590.1.1 | Tomato | nucleus | 20.64 | 13.43 |
| GSMUA_Achr11P... | Banana | nucleus | 18.97 | 13.26 |
| GSMUA_Achr3P22800_001 | Banana | nucleus | 21.62 | 13.25 |
| OQU89013 | Sorghum | nucleus | 18.83 | 13.16 |
| HORVU4Hr1G001840.2 | Barley | nucleus | 19.25 | 12.43 |
| Zm00001d019856_P005 | Maize | plastid | 18.55 | 12.05 |
| Zm00001d005350_P005 | Maize | plastid | 19.25 | 11.89 |
| CDY33157 | Canola | nucleus | 1.53 | 6.47 |
Protein Annotations
| EnsemblPlants:CDY69913 | EnsemblPlantsGene:GSBRNA2T00093411001 | GO:A0A078JQQ2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_type | PANTHER:PTHR15921 | PANTHER:PTHR15921:SF5 | PFscan:PS50157 | ProteinID:CDY69913 |
| ProteinID:CDY69913.1 | ScanProsite:PS00028 | SEG:seg | UniParc:UPI0004EF1EEF | UniProt:A0A078JQQ2 | MapMan:16.2.1.5.2 |
Description
BnaAnng31980DBnaAnng31980D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JQQ2]
Coordinates
chrLK040671:-:895..3681
Molecular Weight (calculated)
78282.1 Da
IEP (calculated)
6.473
GRAVY (calculated)
-0.655
Length
717 amino acids
Sequence
(BLAST)
(BLAST)
001: YLERQRLQQS GRAKGMVTDV PEIASNLARD SDRLERVSSI ASGGSWAGPA KVNTIRRPQR DSLSEPLYER DMESISGEYD YTSELPHNSR PVIKKVDARV
101: TDDGCEKQWY ETVSRGPDLI SDQRDVLHTK STISNYATAR LENLESSGPS RNTGVPYDSW KNSEEEEFMW DMHSRLSETD VATVNPKNEL HTPEESERLE
201: SDNHLLKRPR LSALDPRFDP TSTNSYSSEQ KDGSVYGRLS STSNAARKGI QPQSKVSDRH SPLRDSTFKQ NMTKQDSRRT HSLTQRDPRA SRFPAKSQSV
301: LRDDFVRAQL KKSNAIDLPD SFQGEKFDSK SAGLTIASEA TGQRNMSDLL EAVMKSGILS NNLTNGAMKE ESSQVNPRAL TVSAASKPKA SPNSVAAKKI
401: SARLKLERSS APLGSDPVSL TGVTSAQTSK ESSKASDPIS SLLSSLVSKG LISASKTELP SLVQCAAAPF ISQDHSPDHS TNSSTSISVV PSDAQSLVVV
501: EKGPVTAPKV APAETAVSEP ENLIGLMFRA DKIRKLHPSV ISSLFDDFPH LCTSCGVRLK EKEELDRHME LHDKKKLELS GTNSKCRVWF PKADDWVAAK
601: AGELEPEYDE ILSEPESEDG PAVAADENQC ACILCGEMFE DCFSQGTGQW LFKGASYLTI PPSNSEANGP IVHAGCLTKS SLPSLGIGNA IKQGQETYAG
701: GSGWHHRGNR FVVIHSS
101: TDDGCEKQWY ETVSRGPDLI SDQRDVLHTK STISNYATAR LENLESSGPS RNTGVPYDSW KNSEEEEFMW DMHSRLSETD VATVNPKNEL HTPEESERLE
201: SDNHLLKRPR LSALDPRFDP TSTNSYSSEQ KDGSVYGRLS STSNAARKGI QPQSKVSDRH SPLRDSTFKQ NMTKQDSRRT HSLTQRDPRA SRFPAKSQSV
301: LRDDFVRAQL KKSNAIDLPD SFQGEKFDSK SAGLTIASEA TGQRNMSDLL EAVMKSGILS NNLTNGAMKE ESSQVNPRAL TVSAASKPKA SPNSVAAKKI
401: SARLKLERSS APLGSDPVSL TGVTSAQTSK ESSKASDPIS SLLSSLVSKG LISASKTELP SLVQCAAAPF ISQDHSPDHS TNSSTSISVV PSDAQSLVVV
501: EKGPVTAPKV APAETAVSEP ENLIGLMFRA DKIRKLHPSV ISSLFDDFPH LCTSCGVRLK EKEELDRHME LHDKKKLELS GTNSKCRVWF PKADDWVAAK
601: AGELEPEYDE ILSEPESEDG PAVAADENQC ACILCGEMFE DCFSQGTGQW LFKGASYLTI PPSNSEANGP IVHAGCLTKS SLPSLGIGNA IKQGQETYAG
701: GSGWHHRGNR FVVIHSS
001: MENPRRPFDR SRDPGPMKKP RLSEESIRPV NSNARQFLSQ RTLGTATAVT VPPASSRFRV SGRETESSIV SDPSREAYQP QPVHPHYELV NQYKSALAEL
101: TFNSKPIITN LTIIAGENVH AAKAVVTAIC NNILEVPSDQ KLPTLYLLDS IVKNIGRDYI KYFGARLPEV FVKAYRQVDP PMHSNMRHLF GTWKGVFHPQ
201: TLQLIEKELG FNAKSDGSAA VVSTARAEPQ SQRPPHSIHV NPKYLERQRL QQSGRTKGMV TDVPETAPNL TRDSDRLERV SSIASGGSWV GPAKVNNIRR
301: PQRDLLSEPL YEKDIESIAG EYDYASDLPH NSRSVIKNVG SRITDDGCEK QWYGATNRDP DLISDQRDGL HSKSRTSNYA TARVENLESS GPSRNIGVPY
401: DSWKNSEEEE FMWDMHSRLS ETDVATINPK NELHAPDESE RLESENHLLK RPRFSALDPR FDPANSTNSY SSEQKDPSSI GHWAFSSTNA TSTATRKGIQ
501: PQPRVASSGI LPSSGSGSDR QSPLHDSTSK QNVTKQDVRR AHSLPQRDPR ASRFPAKQNV PRDDSVRLPS SSSQFKNTNM RELPVEIFDS KSAAENAPGL
601: TLASEATGQP NMSDLLEAVM KSGILSNNST CGAIKEESHD EVNPGALTLP AASKPKTLPI SLATDNLLAR LKVEQSSAPL VSCAASLTGI TSVQTSKEKS
701: KASDPLSCLL SSLVSKGLIS ASKTELPSAP SITQEHSPDH STNSSMSVSV VPADAQPSVL VKGPSTAPKV KGLAAPSETS KSEPKDLIGL KFRADKIREL
801: HPSVISSLFD DLPHLCTSCS VRLKQKEELD RHMELHDKKK LELSGTNSKC RVWFPKVDNW IAAKAGELEP EYEEVLSEPE SAIEDCQAVA ADETQCACIL
901: CGEVFEDYFS QEMAQWMFKG ASYLTNPPAN SEASGPIVHT GCLTTSSLQS LEVGIAIKQE IVE
101: TFNSKPIITN LTIIAGENVH AAKAVVTAIC NNILEVPSDQ KLPTLYLLDS IVKNIGRDYI KYFGARLPEV FVKAYRQVDP PMHSNMRHLF GTWKGVFHPQ
201: TLQLIEKELG FNAKSDGSAA VVSTARAEPQ SQRPPHSIHV NPKYLERQRL QQSGRTKGMV TDVPETAPNL TRDSDRLERV SSIASGGSWV GPAKVNNIRR
301: PQRDLLSEPL YEKDIESIAG EYDYASDLPH NSRSVIKNVG SRITDDGCEK QWYGATNRDP DLISDQRDGL HSKSRTSNYA TARVENLESS GPSRNIGVPY
401: DSWKNSEEEE FMWDMHSRLS ETDVATINPK NELHAPDESE RLESENHLLK RPRFSALDPR FDPANSTNSY SSEQKDPSSI GHWAFSSTNA TSTATRKGIQ
501: PQPRVASSGI LPSSGSGSDR QSPLHDSTSK QNVTKQDVRR AHSLPQRDPR ASRFPAKQNV PRDDSVRLPS SSSQFKNTNM RELPVEIFDS KSAAENAPGL
601: TLASEATGQP NMSDLLEAVM KSGILSNNST CGAIKEESHD EVNPGALTLP AASKPKTLPI SLATDNLLAR LKVEQSSAPL VSCAASLTGI TSVQTSKEKS
701: KASDPLSCLL SSLVSKGLIS ASKTELPSAP SITQEHSPDH STNSSMSVSV VPADAQPSVL VKGPSTAPKV KGLAAPSETS KSEPKDLIGL KFRADKIREL
801: HPSVISSLFD DLPHLCTSCS VRLKQKEELD RHMELHDKKK LELSGTNSKC RVWFPKVDNW IAAKAGELEP EYEEVLSEPE SAIEDCQAVA ADETQCACIL
901: CGEVFEDYFS QEMAQWMFKG ASYLTNPPAN SEASGPIVHT GCLTTSSLQS LEVGIAIKQE IVE
Arabidopsis Description
ENTH/VHS family protein [Source:TAIR;Acc:AT2G36480]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.