Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005265.1-P | Field mustard | nucleus, plastid | 95.36 | 96.7 |
| CDY33156 | Canola | nucleus | 69.6 | 85.56 |
| AT2G36480.1 | Thale cress | nucleus | 59.23 | 62.31 |
| CDY33157 | Canola | nucleus | 9.87 | 58.82 |
| CDY69913 | Canola | nucleus | 32.87 | 46.44 |
| VIT_08s0007g03880.t01 | Wine grape | nucleus | 37.31 | 34.87 |
| KRH32653 | Soybean | nucleus | 31.49 | 32.72 |
| PGSC0003DMT400007032 | Potato | nucleus | 33.47 | 32.41 |
| Solyc09g009120.2.1 | Tomato | nucleus | 33.37 | 32.41 |
| KRG96135 | Soybean | nucleus | 31.0 | 31.49 |
| KRH67849 | Soybean | nucleus | 31.49 | 30.85 |
| GSMUA_Achr10P... | Banana | nucleus | 26.75 | 30.28 |
| KRG96139 | Soybean | nucleus | 29.61 | 29.13 |
| TraesCS4D01G010100.1 | Wheat | plastid | 26.75 | 27.15 |
| OQU89013 | Sorghum | nucleus | 26.75 | 26.41 |
| Solyc10g083590.1.1 | Tomato | nucleus | 28.04 | 25.77 |
| Os09t0566100-01 | Rice | nucleus | 26.95 | 25.54 |
| TraesCS4A01G301900.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 22.31 | 25.34 |
| CDY16640 | Canola | nucleus | 19.15 | 25.06 |
| CDX94585 | Canola | nucleus | 18.66 | 24.87 |
| GSMUA_Achr11P... | Banana | nucleus | 25.07 | 24.76 |
| HORVU4Hr1G001840.2 | Barley | nucleus | 26.85 | 24.5 |
| GSMUA_Achr3P22800_001 | Banana | nucleus | 26.36 | 22.82 |
| Zm00001d019856_P005 | Maize | plastid | 24.78 | 22.74 |
| Zm00001d005350_P005 | Maize | plastid | 25.96 | 22.65 |
| TraesCS4B01G012000.1 | Wheat | cytosol | 18.36 | 22.55 |
| CDY36205 | Canola | nucleus | 8.09 | 19.62 |
| CDX96143 | Canola | nucleus | 7.9 | 19.51 |
Protein Annotations
| MapMan:16.2.1.5.2 | GO:A0A078CDV0 | EnsemblPlants:CDX75035 | ProteinID:CDX75035 | ProteinID:CDX75035.1 | InterPro:CID_dom |
| InterPro:ENTH_VHS | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00117064001 | InterPro:IPR006569 |
| InterPro:IPR008942 | InterPro:IPR013087 | PFAM:PF04818 | ScanProsite:PS00028 | PFscan:PS50157 | PFscan:PS51391 |
| PANTHER:PTHR15921 | PANTHER:PTHR15921:SF5 | InterPro:RNA_pol_II-bd | SMART:SM00582 | SUPFAM:SSF48464 | UniParc:UPI0004EF0A72 |
| InterPro:Znf_C2H2_type | SEG:seg | : | : | : | : |
Description
BnaA05g07810D
Coordinates
chrLK031802:+:2092128..2097146
Molecular Weight (calculated)
110199.0 Da
IEP (calculated)
6.796
GRAVY (calculated)
-0.547
Length
1013 amino acids
Sequence
(BLAST)
(BLAST)
0001: MENSRRAFDR SRDPGPIKKP RLSDEPIRPV NPNARQFPSQ RPVATAVGAL PASSRFRAGG GGGGGREAES SSEAYEPQLV HPHYELVNQY KSALSELTFN
0101: SKPIITNLTI IAGENVHAAK AVVSTICNNI IEIPCLSGYI DPSIVEILDV TLYEIKFAIF WVSHLKNIMQ VPSDQKLPTL YLLDSIVKNI GRDYIKYFAA
0201: RLPEVFVKAY RQVDPPMRSN MRHLFGTWKG VFHPQILQQI EKELGFNAKS DGSVAAVTTG RADLQSQRPP NSIHVNPKYL ERQRLQQSGR TKVMVTDVPE
0301: IASNLTRDPD RLERVSSTAS GGLWAGPAKV NTIRRPQKDS LSEPLYEKDM ESISEEYEYA SDLPHNSRSV VKKVGPRITE DGSGKQWYEA LSRSPDLVSG
0401: QREGLHTKSR VSNYATARLE NSESSGPSRN IGVPYDSWKN SEEEEFMWDM HSRVSETDLA TINPKIEFQA SDESERLESK NHLLKRPRYS AVDPRLDPVN
0501: SYSREQKDSS ILGPWTSSPR SLHDSEVFPS ISAASNAARK GIQPQSRIAS SGILPISGPV SDKQSKQNVS KQDSGRAHSL TQRDPRASRF PAKSQSDSVR
0601: PLSSSSQFKN TNTLELPDSS QVEKFDSKST AENARGQANM NDLLAAVMKS GILSNNATCG GSKEEMSQNG ADPRALTLSA VSKDKTLPTS VAGAVSLTGV
0701: TSAQTSKENS KASDPISSLL SSLVSKGLIS ASKPEPPASK TELPSLAQCA APSVSQDHSP DHSTSSSMSV VPSDAQPVVL VKKGPSTAPK VAPVETAKPE
0801: PENLIGLKFR ADKIRELHPS VISSLFDDLP HLCTSCGVRL KQKEELDRHV EELHDKKKLE LSGTNSKCRV WFPKADDWIV AKSGEIEPGY EEDLSEPESA
0901: AEDGPAVAAD ENQSACILCG EMFEEYFSQE VDQWMFKGAS YLAIPPDESE ANGPIVHAAC LTKSSLPGLG VGNAIKQVKG TCAGGSGGIT GETGLVWSIS
1001: RDASFVEKCH ASS
0101: SKPIITNLTI IAGENVHAAK AVVSTICNNI IEIPCLSGYI DPSIVEILDV TLYEIKFAIF WVSHLKNIMQ VPSDQKLPTL YLLDSIVKNI GRDYIKYFAA
0201: RLPEVFVKAY RQVDPPMRSN MRHLFGTWKG VFHPQILQQI EKELGFNAKS DGSVAAVTTG RADLQSQRPP NSIHVNPKYL ERQRLQQSGR TKVMVTDVPE
0301: IASNLTRDPD RLERVSSTAS GGLWAGPAKV NTIRRPQKDS LSEPLYEKDM ESISEEYEYA SDLPHNSRSV VKKVGPRITE DGSGKQWYEA LSRSPDLVSG
0401: QREGLHTKSR VSNYATARLE NSESSGPSRN IGVPYDSWKN SEEEEFMWDM HSRVSETDLA TINPKIEFQA SDESERLESK NHLLKRPRYS AVDPRLDPVN
0501: SYSREQKDSS ILGPWTSSPR SLHDSEVFPS ISAASNAARK GIQPQSRIAS SGILPISGPV SDKQSKQNVS KQDSGRAHSL TQRDPRASRF PAKSQSDSVR
0601: PLSSSSQFKN TNTLELPDSS QVEKFDSKST AENARGQANM NDLLAAVMKS GILSNNATCG GSKEEMSQNG ADPRALTLSA VSKDKTLPTS VAGAVSLTGV
0701: TSAQTSKENS KASDPISSLL SSLVSKGLIS ASKPEPPASK TELPSLAQCA APSVSQDHSP DHSTSSSMSV VPSDAQPVVL VKKGPSTAPK VAPVETAKPE
0801: PENLIGLKFR ADKIRELHPS VISSLFDDLP HLCTSCGVRL KQKEELDRHV EELHDKKKLE LSGTNSKCRV WFPKADDWIV AKSGEIEPGY EEDLSEPESA
0901: AEDGPAVAAD ENQSACILCG EMFEEYFSQE VDQWMFKGAS YLAIPPDESE ANGPIVHAAC LTKSSLPGLG VGNAIKQVKG TCAGGSGGIT GETGLVWSIS
1001: RDASFVEKCH ASS
001: MENPRRPFDR SRDPGPMKKP RLSEESIRPV NSNARQFLSQ RTLGTATAVT VPPASSRFRV SGRETESSIV SDPSREAYQP QPVHPHYELV NQYKSALAEL
101: TFNSKPIITN LTIIAGENVH AAKAVVTAIC NNILEVPSDQ KLPTLYLLDS IVKNIGRDYI KYFGARLPEV FVKAYRQVDP PMHSNMRHLF GTWKGVFHPQ
201: TLQLIEKELG FNAKSDGSAA VVSTARAEPQ SQRPPHSIHV NPKYLERQRL QQSGRTKGMV TDVPETAPNL TRDSDRLERV SSIASGGSWV GPAKVNNIRR
301: PQRDLLSEPL YEKDIESIAG EYDYASDLPH NSRSVIKNVG SRITDDGCEK QWYGATNRDP DLISDQRDGL HSKSRTSNYA TARVENLESS GPSRNIGVPY
401: DSWKNSEEEE FMWDMHSRLS ETDVATINPK NELHAPDESE RLESENHLLK RPRFSALDPR FDPANSTNSY SSEQKDPSSI GHWAFSSTNA TSTATRKGIQ
501: PQPRVASSGI LPSSGSGSDR QSPLHDSTSK QNVTKQDVRR AHSLPQRDPR ASRFPAKQNV PRDDSVRLPS SSSQFKNTNM RELPVEIFDS KSAAENAPGL
601: TLASEATGQP NMSDLLEAVM KSGILSNNST CGAIKEESHD EVNPGALTLP AASKPKTLPI SLATDNLLAR LKVEQSSAPL VSCAASLTGI TSVQTSKEKS
701: KASDPLSCLL SSLVSKGLIS ASKTELPSAP SITQEHSPDH STNSSMSVSV VPADAQPSVL VKGPSTAPKV KGLAAPSETS KSEPKDLIGL KFRADKIREL
801: HPSVISSLFD DLPHLCTSCS VRLKQKEELD RHMELHDKKK LELSGTNSKC RVWFPKVDNW IAAKAGELEP EYEEVLSEPE SAIEDCQAVA ADETQCACIL
901: CGEVFEDYFS QEMAQWMFKG ASYLTNPPAN SEASGPIVHT GCLTTSSLQS LEVGIAIKQE IVE
101: TFNSKPIITN LTIIAGENVH AAKAVVTAIC NNILEVPSDQ KLPTLYLLDS IVKNIGRDYI KYFGARLPEV FVKAYRQVDP PMHSNMRHLF GTWKGVFHPQ
201: TLQLIEKELG FNAKSDGSAA VVSTARAEPQ SQRPPHSIHV NPKYLERQRL QQSGRTKGMV TDVPETAPNL TRDSDRLERV SSIASGGSWV GPAKVNNIRR
301: PQRDLLSEPL YEKDIESIAG EYDYASDLPH NSRSVIKNVG SRITDDGCEK QWYGATNRDP DLISDQRDGL HSKSRTSNYA TARVENLESS GPSRNIGVPY
401: DSWKNSEEEE FMWDMHSRLS ETDVATINPK NELHAPDESE RLESENHLLK RPRFSALDPR FDPANSTNSY SSEQKDPSSI GHWAFSSTNA TSTATRKGIQ
501: PQPRVASSGI LPSSGSGSDR QSPLHDSTSK QNVTKQDVRR AHSLPQRDPR ASRFPAKQNV PRDDSVRLPS SSSQFKNTNM RELPVEIFDS KSAAENAPGL
601: TLASEATGQP NMSDLLEAVM KSGILSNNST CGAIKEESHD EVNPGALTLP AASKPKTLPI SLATDNLLAR LKVEQSSAPL VSCAASLTGI TSVQTSKEKS
701: KASDPLSCLL SSLVSKGLIS ASKTELPSAP SITQEHSPDH STNSSMSVSV VPADAQPSVL VKGPSTAPKV KGLAAPSETS KSEPKDLIGL KFRADKIREL
801: HPSVISSLFD DLPHLCTSCS VRLKQKEELD RHMELHDKKK LELSGTNSKC RVWFPKVDNW IAAKAGELEP EYEEVLSEPE SAIEDCQAVA ADETQCACIL
901: CGEVFEDYFS QEMAQWMFKG ASYLTNPPAN SEASGPIVHT GCLTTSSLQS LEVGIAIKQE IVE
Arabidopsis Description
ENTH/VHS family protein [Source:TAIR;Acc:AT2G36480]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.