Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400073576 | Potato | plastid | 87.05 | 87.27 |
| HORVU1Hr1G062460.2 | Barley | cytosol, nucleus | 30.83 | 57.77 |
| GSMUA_Achr3P09070_001 | Banana | cytosol | 40.41 | 56.73 |
| TraesCS1B01G258900.1 | Wheat | cytosol | 33.42 | 56.58 |
| Solyc01g080080.2.1 | Tomato | nucleus | 21.24 | 52.56 |
| EES19487 | Sorghum | nucleus | 41.71 | 47.35 |
| VIT_14s0128g00180.t01 | Wine grape | mitochondrion | 54.15 | 46.97 |
| Zm00001d038127_P001 | Maize | nucleus | 39.9 | 45.83 |
| Os05t0397650-00 | Rice | nucleus | 41.45 | 45.07 |
| Solyc10g084100.1.1 | Tomato | nucleus, plastid | 34.72 | 42.01 |
| Solyc09g007700.2.1 | Tomato | plastid | 39.38 | 41.99 |
| Solyc10g086080.1.1 | Tomato | nucleus | 36.01 | 41.49 |
| Solyc04g054680.1.1 | Tomato | cytosol | 23.32 | 25.14 |
| Solyc04g054650.1.1 | Tomato | cytosol | 26.42 | 20.99 |
Protein Annotations
| EnsemblPlants:Solyc01g098750.2.1 | EnsemblPlantsGene:Solyc01g098750.2 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22996 | PANTHER:PTHR22996:SF4 | PFAM:PF13920 | PFscan:PS50089 | SEG:seg |
| SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI000276898B | UniProt:K4B0R2 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr1:+:89182885..89189019
Molecular Weight (calculated)
43254.2 Da
IEP (calculated)
6.725
GRAVY (calculated)
-0.582
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MGISWSKRHQ NHHLHHPPPP PLLPPPSSSI APPFPSLSPP PLPPPHPTYS VPTTSTTPHP SRNPYPLLTP PPPPNYPPPS NSNYHFSFSQ SSYGTRPVLY
101: QNQYPPYYHH PHSNNGWGGF RPPPPPPPPL PAVPYVDHQN TKKIKNDVNV HKDTIRVHVD EFNKDFHLVS FTFDALVDGS ITIFYFAKEG PNCKFNPVYP
201: EIKPVQIPFV KGLGQKFSQP SGTGIDLGFF DVNDLSKPLQ GEEIFPLVIS AESSLSSTPL DEKYVGQSLE NSAHSQITEA VLVKNNEDHF QVKVIKQILW
301: IEGVRYELRE IYGINNSEET NVNDEESGKE CVICMTEPKD TAVLPCRHMC LCGECAKELR HQSNKCPICR QPIEELLEIK VKEAAS
101: QNQYPPYYHH PHSNNGWGGF RPPPPPPPPL PAVPYVDHQN TKKIKNDVNV HKDTIRVHVD EFNKDFHLVS FTFDALVDGS ITIFYFAKEG PNCKFNPVYP
201: EIKPVQIPFV KGLGQKFSQP SGTGIDLGFF DVNDLSKPLQ GEEIFPLVIS AESSLSSTPL DEKYVGQSLE NSAHSQITEA VLVKNNEDHF QVKVIKQILW
301: IEGVRYELRE IYGINNSEET NVNDEESGKE CVICMTEPKD TAVLPCRHMC LCGECAKELR HQSNKCPICR QPIEELLEIK VKEAAS
001: MGISFSNNNR RRDNNNRRHL HHYPPPPPYY YLDPPPPPPP FPPHYDYNYS NYHLSPPLPP QPQINSCSYG HYHYHPQPPQ YFTTAQPNWW GPMMRPAYYC
101: PPQPQTQPPK PYLEQQNAKK VRNDVNVHRD TVRLEVDDLV PGHHLVSFVF DALFDGSFTI TFFAKEEPNC TIIPQFPEVY SPTRFHFQKG PGQKFLQPSG
201: TGTDLSFFVL DDLSKPLEED VYPLVISAET IISPNSISEQ SSVHKQVTQA VLEKDNDGSF KVKVVKQILW IEGVRYELRE LYGSTTQGAA SGLDESGSGT
301: ECVICMTEAK DTAVLPCRHL CMCSDCAKEL RLQSNKCPIC RQPIEELLEI KMNSSDEQH
101: PPQPQTQPPK PYLEQQNAKK VRNDVNVHRD TVRLEVDDLV PGHHLVSFVF DALFDGSFTI TFFAKEEPNC TIIPQFPEVY SPTRFHFQKG PGQKFLQPSG
201: TGTDLSFFVL DDLSKPLEED VYPLVISAET IISPNSISEQ SSVHKQVTQA VLEKDNDGSF KVKVVKQILW IEGVRYELRE LYGSTTQGAA SGLDESGSGT
301: ECVICMTEAK DTAVLPCRHL CMCSDCAKEL RLQSNKCPIC RQPIEELLEI KMNSSDEQH
Arabidopsis Description
LUL4Probable E3 ubiquitin-protein ligase LUL4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LA32]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.