Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, plastid
Any Predictor:endoplasmic reticulum, plasma membrane, plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G176000.1 Wheat endoplasmic reticulum, plasma membrane, plastid 96.17 96.17
TraesCS5A01G171200.1 Wheat endoplasmic reticulum, plasma membrane, plastid 93.78 93.78
HORVU5Hr1G052650.2 Barley endoplasmic reticulum, plasma membrane, vacuole 88.52 84.09
Os09t0267400-01 Rice plasma membrane 73.68 73.33
EER98613 Sorghum endoplasmic reticulum, plasma membrane, plastid 72.73 73.08
Zm00001d005265_P001 Maize endoplasmic reticulum, plasma membrane, plastid 72.25 72.6
PGSC0003DMT400047270 Potato cytosol 35.41 34.42
PGSC0003DMT400047271 Potato cytosol, golgi, plasma membrane 30.14 28.12
KRH22411 Soybean cytosol, endoplasmic reticulum, plasma membrane 29.67 26.72
TraesCS1B01G183500.1 Wheat cytosol, nucleus, plasma membrane 33.49 26.32
KRH26927 Soybean cytosol 19.62 24.7
TraesCS4B01G095300.1 Wheat cytosol, endoplasmic reticulum, peroxisome 25.84 23.89
TraesCS4B01G095400.1 Wheat cytosol, endoplasmic reticulum, peroxisome 26.32 23.71
Solyc07g054250.2.1 Tomato cytosol, nucleus, plastid 30.62 23.62
TraesCS1B01G251100.1 Wheat endoplasmic reticulum, plasma membrane, plastid 27.75 23.11
TraesCS2B01G591000.1 Wheat peroxisome 27.27 22.44
TraesCS4B01G128000.1 Wheat cytosol, extracellular, plasma membrane 27.27 20.8
TraesCS3B01G367900.1 Wheat cytosol, endoplasmic reticulum, peroxisome, plastid 29.67 18.79
TraesCS5B01G139500.1 Wheat cytosol, extracellular, peroxisome 24.88 18.37
Protein Annotations
EnsemblPlants:TraesCS5B01G168700.1EnsemblPlantsGene:TraesCS5B01G168700InterPro:LEA_2PANTHER:PTHR31852PANTHER:PTHR31852:SF30PFAM:PF03168
SEG:segTMHMM:TMhelixMapMan:35.1:::
Description
No Description!
Coordinates
chr5B:-:313114814..313115443
Molecular Weight (calculated)
22597.3 Da
IEP (calculated)
7.693
GRAVY (calculated)
0.016
Length
209 amino acids
Sequence
(BLAST)
001: MGKRSAPRYP EDENKGGGVC CCLCGCCCFL LVLLALLLGS LVYLAYTLKP KAPSYSVSKM AVSKFDFSSS DLTLYTKLVA TVRAENPNDK IGIKYADGSH
101: TVVSYRGTPL CSGKLPTFFQ GHNNVTMLEI SMEGRHGFGS GLQEALEESE KSGNVPLDVY VTVPVQLLLD TYDLPQLKVN VHAALVVDSI SPKKAPTIKS
201: ATYQGNVEY
Best Arabidopsis Sequence Match ( AT1G65690.1 )
(BLAST)
001: MSQHQKIYPV QDPEAATARP TAPLVPRGSS RSEHGDPSKV PLNQRPQRFV PLAPPKKRRS CCCRCFCYTF CFLLLLVVAV GASIGILYLV FKPKLPDYSI
101: DRLQLTRFAL NQDSSLTTAF NVTITAKNPN EKIGIYYEDG SKITVWYMEH QLSNGSLPKF YQGHENTTVI YVEMTGQTQN ASGLRTTLEE QQQRTGNIPL
201: RIRVNQPVRV KFGKLKLFEV RFLVRCGVFV DSLATNNVIK IQSSSCKFRL RL
Arabidopsis Description
NHL6NDR1/HIN1-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LD98]
SUBAcon: [plasma membrane,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.