Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH22411 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 88.55 | 63.36 |
| EER98613 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 29.52 | 23.56 |
| Os08t0324200-01 | Rice | cytosol | 33.13 | 22.73 |
| Zm00001d005265_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid | 28.31 | 22.6 |
| Os09t0267400-01 | Rice | plasma membrane | 27.71 | 21.9 |
| PGSC0003DMT400047271 | Potato | cytosol, golgi, plasma membrane | 29.52 | 21.88 |
| PGSC0003DMT400047270 | Potato | cytosol | 27.71 | 21.4 |
| TraesCS5A01G171200.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 25.3 | 20.1 |
| TraesCS5D01G176000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 24.7 | 19.62 |
| TraesCS5B01G168700.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 24.7 | 19.62 |
| KRH34277 | Soybean | plasma membrane | 28.92 | 19.05 |
| KRG92519 | Soybean | cytosol | 28.31 | 18.8 |
| HORVU5Hr1G052650.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 24.7 | 18.64 |
| KRH30725 | Soybean | cytosol, nucleus, plasma membrane | 26.51 | 17.89 |
| Solyc07g054250.2.1 | Tomato | cytosol, nucleus, plastid | 28.92 | 17.71 |
| KRH72891 | Soybean | nucleus, peroxisome, plasma membrane | 27.11 | 17.65 |
| KRH17244 | Soybean | cytosol, peroxisome, plasma membrane | 27.11 | 17.31 |
| KRG98056 | Soybean | cytosol, peroxisome, plasma membrane | 24.7 | 16.8 |
| KRH14686 | Soybean | plastid | 25.9 | 15.75 |
| KRH73453 | Soybean | plastid | 25.3 | 15.38 |
Protein Annotations
| EMBL:ACUP02007760 | EnsemblPlants:KRH26927 | EnsemblPlantsGene:GLYMA_12G202900 | InterPro:LEA_2 | PANTHER:PTHR31852 | PANTHER:PTHR31852:SF35 |
| PFAM:PF03168 | ProteinID:KRH26927 | ProteinID:KRH26927.1 | SEG:seg | UniParc:UPI0006ED4F8E | UniProt:A0A0R0HK67 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr12:+:36333664..36334359
Molecular Weight (calculated)
18598.7 Da
IEP (calculated)
9.086
GRAVY (calculated)
-0.269
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSEAYVPKR YESLENPFAH KPRKRSHQGS GLCGCLRKEN KVYSDVVIVV KADNQNEDIG LDYLDNEVGI MYLGSQLSSG QIPPFLQPGK NTTKVNVELK
101: GENEFGEKGK IPLLITVKLP IRLVIKDLIH LRKVVVNVNC SVVIDKLEAN KSPKILDKVF TYGIDF
101: GENEFGEKGK IPLLITVKLP IRLVIKDLIH LRKVVVNVNC SVVIDKLEAN KSPKILDKVF TYGIDF
001: MSQHQKIYPV QDPEAATARP TAPLVPRGSS RSEHGDPSKV PLNQRPQRFV PLAPPKKRRS CCCRCFCYTF CFLLLLVVAV GASIGILYLV FKPKLPDYSI
101: DRLQLTRFAL NQDSSLTTAF NVTITAKNPN EKIGIYYEDG SKITVWYMEH QLSNGSLPKF YQGHENTTVI YVEMTGQTQN ASGLRTTLEE QQQRTGNIPL
201: RIRVNQPVRV KFGKLKLFEV RFLVRCGVFV DSLATNNVIK IQSSSCKFRL RL
101: DRLQLTRFAL NQDSSLTTAF NVTITAKNPN EKIGIYYEDG SKITVWYMEH QLSNGSLPKF YQGHENTTVI YVEMTGQTQN ASGLRTTLEE QQQRTGNIPL
201: RIRVNQPVRV KFGKLKLFEV RFLVRCGVFV DSLATNNVIK IQSSSCKFRL RL
Arabidopsis Description
NHL6NDR1/HIN1-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LD98]
SUBAcon: [plasma membrane,plastid]
SUBAcon: [plasma membrane,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.