CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

plastid 2
endoplasmic reticulum 2
nucleus 1
extracellular 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26927	Soybean	cytosol	63.36	88.55
EER98613	Sorghum	endoplasmic reticulum, plasma membrane, plastid	28.88	32.21
Zm00001d005265_P001	Maize	endoplasmic reticulum, plasma membrane, plastid	28.02	31.25
PGSC0003DMT400047271	Potato	cytosol, golgi, plasma membrane	30.17	31.25
PGSC0003DMT400047270	Potato	cytosol	28.88	31.16
Os09t0267400-01	Rice	plasma membrane	28.02	30.95
TraesCS5A01G171200.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	27.59	30.62
TraesCS5D01G176000.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	26.72	29.67
TraesCS5B01G168700.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	26.72	29.67
Os08t0324200-01	Rice	cytosol	30.6	29.34
HORVU5Hr1G052650.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	26.29	27.73
KRG92519	Soybean	cytosol	25.86	24.0
KRH72891	Soybean	nucleus, peroxisome, plasma membrane	25.86	23.53
KRH17244	Soybean	cytosol, peroxisome, plasma membrane	26.29	23.46
KRH34277	Soybean	plasma membrane	25.43	23.41
KRH30725	Soybean	cytosol, nucleus, plasma membrane	24.57	23.17
KRH14686	Soybean	plastid	26.29	22.34
KRG98056	Soybean	cytosol, peroxisome, plasma membrane	23.28	22.13
Solyc07g054250.2.1	Tomato	cytosol, nucleus, plastid	25.43	21.77
KRH73453	Soybean	plastid	25.0	21.25

Protein Annotations

EMBL:ACUP02008411	EnsemblPlants:KRH22411	EnsemblPlantsGene:GLYMA_13G298800	EntrezGene:102667828	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:LEA_2	PANTHER:PTHR31852	PANTHER:PTHR31852:SF35	PFAM:PF03168	ProteinID:KRH22411
ProteinID:KRH22411.1	SEG:seg	SUPFAM:SSF117070	TMHMM:TMhelix	UniParc:UPI00029481D2	UniProt:K7M2Q3
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:39723376..39724074

Molecular Weight (calculated)

26322.4 Da

IEP (calculated)

7.801

GRAVY (calculated)

0.095

Length

232 amino acids

Sequence
(BLAST)

001: MTSEAYVPKR YESLENPFAH KPPRKRSRRG SGFCGCLRCC CCCFSFCRCC ICTIFIIIIL LVGIGLALFY FIKPKVPSYD IEHINVKSFD IRKESKVYTD
101: VVIVVKADNP NEEIGLDYLE NEVGIMYVGS QLSSGQIPPF LQPGKNTTTV TVELKGENEF SVEMQNHFME DQEKGNIPLL ITVKLPIRIV INDLIHLRKV
201: VVNLNCSVVI DKLEVNKSPK ILDKVFSYGI EF

Best Arabidopsis Sequence Match ( AT1G65690.1 )
(BLAST)

001: MSQHQKIYPV QDPEAATARP TAPLVPRGSS RSEHGDPSKV PLNQRPQRFV PLAPPKKRRS CCCRCFCYTF CFLLLLVVAV GASIGILYLV FKPKLPDYSI
101: DRLQLTRFAL NQDSSLTTAF NVTITAKNPN EKIGIYYEDG SKITVWYMEH QLSNGSLPKF YQGHENTTVI YVEMTGQTQN ASGLRTTLEE QQQRTGNIPL
201: RIRVNQPVRV KFGKLKLFEV RFLVRCGVFV DSLATNNVIK IQSSSCKFRL RL

Arabidopsis Description

NHL6NDR1/HIN1-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LD98]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.