CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
plasma membrane 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98056	Soybean	cytosol, peroxisome, plasma membrane	93.09	93.85
KRH72891	Soybean	nucleus, peroxisome, plasma membrane	70.33	67.84
KRH17244	Soybean	cytosol, peroxisome, plasma membrane	70.73	66.92
VIT_04s0069g01010.t01	Wine grape	plasma membrane	63.01	61.75
GSMUA_Achr5P11970_001	Banana	cytosol, peroxisome, plasma membrane	56.91	56.91
GSMUA_Achr9P20600_001	Banana	nucleus, peroxisome, plasma membrane	54.06	55.42
AT1G65690.1	Thale cress	plasma membrane, plastid	56.5	55.16
CDY72163	Canola	plastid	54.88	54.44
CDY16419	Canola	plastid	54.47	54.03
Bra039737.1-P	Field mustard	plasma membrane, plastid	54.47	54.03
GSMUA_Achr3P14210_001	Banana	plasma membrane	52.44	53.31
KRH34277	Soybean	plasma membrane	52.85	51.59
PGSC0003DMT400050761	Potato	cytosol, plasma membrane, vacuole	54.47	51.54
KRG92519	Soybean	cytosol	52.03	51.2
PGSC0003DMT400055257	Potato	plasma membrane, plastid	53.25	50.58
Solyc02g036480.1.1	Tomato	nucleus	51.63	49.61
TraesCS1A01G167100.1	Wheat	cytosol, nucleus, peroxisome	50.81	49.41
AT5G36970.1	Thale cress	nucleus, peroxisome, plasma membrane	49.59	49.19
HORVU1Hr1G044080.1	Barley	cytosol, endoplasmic reticulum, peroxisome	50.81	48.08
CDX74604	Canola	cytosol, nucleus, plasma membrane	49.59	47.84
CDY53530	Canola	cytosol, nucleus, plasma membrane	49.59	47.84
Bra028103.1-P	Field mustard	cytosol, nucleus, plasma membrane	49.19	47.45
TraesCS1D01G173800.1	Wheat	cytosol, nucleus, plasma membrane	51.22	47.37
TraesCS1B01G183500.1	Wheat	cytosol, nucleus, plasma membrane	51.22	47.37
GSMUA_Achr1P17720_001	Banana	plasma membrane	50.0	45.22
Zm00001d032620_P001	Maize	cytosol	48.37	43.43
Zm00001d013947_P001	Maize	cytosol	46.75	43.4
KXG38271	Sorghum	cytosol, nucleus, vacuole	47.97	42.75
OQU85155	Sorghum	extracellular, plasma membrane	32.52	40.82
CDY26995	Canola	cytosol	50.81	40.72
Solyc02g081450.2.1	Tomato	cytosol, plasma membrane, vacuole	53.66	40.49
HORVU2Hr1G119500.1	Barley	peroxisome	39.84	38.89
TraesCS2D01G561400.1	Wheat	peroxisome	39.02	37.94
TraesCS4A01G217000.1	Wheat	cytosol, endoplasmic reticulum, peroxisome, plastid	34.55	37.61
Os04t0677300-01	Rice	plastid	38.62	37.25
TraesCS2A01G593300.1	Wheat	peroxisome	38.21	37.15
TraesCS4A01G216800.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	33.33	37.1
TraesCS4D01G091900.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	33.74	36.73
TraesCS2B01G591000.1	Wheat	peroxisome	37.8	36.61
TraesCS4B01G095400.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	34.15	36.21
EES13101	Sorghum	cytosol	36.18	36.03
Zm00001d001832_P001	Maize	plastid	36.59	35.86
TraesCS4D01G092200.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	32.52	35.56
TraesCS4B01G095300.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	32.52	35.4
HORVU4Hr1G018760.1	Barley	cytosol, endoplasmic reticulum, peroxisome	32.93	34.62
OQU90204	Sorghum	mitochondrion, plastid	30.49	34.4
EES06862	Sorghum	peroxisome	29.67	30.93
KRH73453	Soybean	plastid	34.15	30.77
KRH14686	Soybean	plastid	33.74	30.4
Os02t0507900-00	Rice	cytosol	30.49	30.0
HORVU4Hr1G018720.1	Barley	cytosol	17.48	27.56
KRH26927	Soybean	cytosol	17.89	26.51
KRH22411	Soybean	cytosol, endoplasmic reticulum, plasma membrane	23.17	24.57
OQU88420	Sorghum	mitochondrion	29.67	20.92
CDY38564	Canola	plasma membrane	50.41	19.56

Protein Annotations

EMBL:ACUP02007061	EnsemblPlants:KRH30725	EnsemblPlantsGene:GLYMA_11G203000	EntrezGene:100781699	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:LEA_2	PANTHER:PTHR31852	PANTHER:PTHR31852:SF1	PFAM:PF03168	ProteinID:KRH30725
ProteinID:KRH30725.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000233CE35	UniProt:I1LM17	MapMan:35.1

Description

hypothetical protein

Coordinates

chr11:+:28357079..28358465

Molecular Weight (calculated)

28181.7 Da

IEP (calculated)

10.595

GRAVY (calculated)

-0.239

Length

246 amino acids

Sequence
(BLAST)

001: MMAAEHQRIH PVHDVEAQHR PLVPQNIAKS DDKGIPHRTF PVMHSKPPKR RRSCCCRFMC WTLSILLILI IAIAITIGIL YLVFRPKLPK YSVDQLRISQ
101: FNVSDNNTLY ATFNVAITAR NPNKKIGIYY EGGSHISAWY METQLCEGSL PKFYQGHRNT TVLDLPLTGQ AHDANGLVNR IQEQLQQTNN VPLNLKVNQP
201: VRVKLGKLKL FKVKFRVRCK LEVDNILGAS NDIRISRSSC KFRLRL

Best Arabidopsis Sequence Match ( AT1G65690.1 )
(BLAST)

001: MSQHQKIYPV QDPEAATARP TAPLVPRGSS RSEHGDPSKV PLNQRPQRFV PLAPPKKRRS CCCRCFCYTF CFLLLLVVAV GASIGILYLV FKPKLPDYSI
101: DRLQLTRFAL NQDSSLTTAF NVTITAKNPN EKIGIYYEDG SKITVWYMEH QLSNGSLPKF YQGHENTTVI YVEMTGQTQN ASGLRTTLEE QQQRTGNIPL
201: RIRVNQPVRV KFGKLKLFEV RFLVRCGVFV DSLATNNVIK IQSSSCKFRL RL

Arabidopsis Description

NHL6NDR1/HIN1-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LD98]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.