Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d013947_P001 | Maize | cytosol | 85.04 | 87.92 |
| KXG38271 | Sorghum | cytosol, nucleus, vacuole | 85.4 | 84.78 |
| OQU85155 | Sorghum | extracellular, plasma membrane | 55.11 | 77.04 |
| TraesCS1D01G173800.1 | Wheat | cytosol, nucleus, plasma membrane | 73.72 | 75.94 |
| TraesCS1B01G183500.1 | Wheat | cytosol, nucleus, plasma membrane | 72.99 | 75.19 |
| HORVU1Hr1G044080.1 | Barley | cytosol, endoplasmic reticulum, peroxisome | 71.17 | 75.0 |
| TraesCS1A01G167100.1 | Wheat | cytosol, nucleus, peroxisome | 68.61 | 74.31 |
| OQU90204 | Sorghum | mitochondrion, plastid | 51.82 | 65.14 |
| GSMUA_Achr5P11970_001 | Banana | cytosol, peroxisome, plasma membrane | 52.92 | 58.94 |
| KRH34277 | Soybean | plasma membrane | 44.53 | 48.41 |
| KRH30725 | Soybean | cytosol, nucleus, plasma membrane | 43.43 | 48.37 |
| KRG98056 | Soybean | cytosol, peroxisome, plasma membrane | 43.07 | 48.36 |
| PGSC0003DMT400039340 | Potato | plastid | 43.43 | 46.12 |
| KRG92519 | Soybean | cytosol | 41.97 | 46.0 |
| Solyc03g019920.1.1 | Tomato | plastid | 40.51 | 44.94 |
| AT1G65690.1 | Thale cress | plasma membrane, plastid | 40.88 | 44.44 |
| PGSC0003DMT400050761 | Potato | cytosol, plasma membrane, vacuole | 41.61 | 43.85 |
| AT5G36970.1 | Thale cress | nucleus, peroxisome, plasma membrane | 39.42 | 43.55 |
| VIT_04s0069g01010.t01 | Wine grape | plasma membrane | 39.78 | 43.43 |
| KRH17244 | Soybean | cytosol, peroxisome, plasma membrane | 40.88 | 43.08 |
| KRH72891 | Soybean | nucleus, peroxisome, plasma membrane | 39.78 | 42.75 |
| VIT_16s0039g00340.t01 | Wine grape | cytosol | 44.16 | 42.01 |
| CDY16419 | Canola | plastid | 37.96 | 41.94 |
| Bra039737.1-P | Field mustard | plasma membrane, plastid | 37.96 | 41.94 |
| CDY53530 | Canola | cytosol, nucleus, plasma membrane | 38.69 | 41.57 |
| CDY72163 | Canola | plastid | 37.59 | 41.53 |
| PGSC0003DMT400055257 | Potato | plasma membrane, plastid | 39.05 | 41.31 |
| Bra028103.1-P | Field mustard | cytosol, nucleus, plasma membrane | 37.59 | 40.39 |
| OQU88420 | Sorghum | mitochondrion | 51.09 | 40.11 |
| CDX74604 | Canola | cytosol, nucleus, plasma membrane | 37.23 | 40.0 |
| Solyc02g036480.1.1 | Tomato | nucleus | 37.23 | 39.84 |
| Zm00001d001832_P001 | Maize | plastid | 36.5 | 39.84 |
| AT1G54540.1 | Thale cress | cytosol, peroxisome, plasma membrane, plastid | 33.21 | 38.08 |
| Bra027969.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 36.5 | 37.17 |
| CDY26995 | Canola | cytosol | 39.05 | 34.85 |
| Solyc02g081450.2.1 | Tomato | cytosol, plasma membrane, vacuole | 41.24 | 34.66 |
| Zm00001d005010_P001 | Maize | plastid | 33.21 | 32.04 |
| Zm00001d005265_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid | 23.72 | 31.25 |
| Zm00001d043128_P001 | Maize | cytosol | 29.56 | 27.36 |
| Zm00001d028765_P001 | Maize | plastid | 24.45 | 21.47 |
| CDY38564 | Canola | plasma membrane | 38.69 | 16.72 |
Protein Annotations
| EnsemblPlants:Zm00001d032620_P001 | EnsemblPlants:Zm00001d032620_T001 | EnsemblPlantsGene:Zm00001d032620 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:LEA_2 | PANTHER:PTHR31852 | PANTHER:PTHR31852:SF1 | PFAM:PF03168 | ProteinID:ONM05575.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000221FF7E | UniProt:A0A1D6KSC3 | MapMan:35.1 | : | : |
Description
NDR1/HIN1-like 25
Coordinates
chr1:+:232280618..232281442
Molecular Weight (calculated)
29477.8 Da
IEP (calculated)
10.512
GRAVY (calculated)
-0.104
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MADHQRIHPV DLEAGNRPTT PLVPGGSFRS DKGDPAQRAN NHHQQQQQRG YVYVPGPLPP PPRRAAPPAP PLPPPKRRGR GCCCRFLCCA VITAVVLAVL
101: AAAAAGALYL LLDPKAPRYS VDRLSVSTFQ VDPSTLTARA GFDVAVTAAN PNSRIAIQYE PGSSLGVWYQ SYRLARGALP PFYQGHRNTT VLALAMAGEV
201: QLGGAAVAGM RDAQRTGAVP LVFRADVPVR VELGTFKLWK VTSRVRCDLV VDRLMDVSSP IKIKASNCKF GLKL
101: AAAAAGALYL LLDPKAPRYS VDRLSVSTFQ VDPSTLTARA GFDVAVTAAN PNSRIAIQYE PGSSLGVWYQ SYRLARGALP PFYQGHRNTT VLALAMAGEV
201: QLGGAAVAGM RDAQRTGAVP LVFRADVPVR VELGTFKLWK VTSRVRCDLV VDRLMDVSSP IKIKASNCKF GLKL
001: MSDHQKIHPV SDPEAPPHPT APLVPRGSSR SEHGDPTKTQ QAAPLDPPRE KKGSRSCWCR CVCYTLLVLF LLIVIVGAIV GILYLVFRPK FPDYNIDRLQ
101: LTRFQLNQDL SLSTAFNVTI TAKNPNEKIG IYYEDGSKIS VLYMQTRISN GSLPKFYQGH ENTTIILVEM TGFTQNATSL MTTLQEQQRL TGSIPLRIRV
201: TQPVRIKLGK LKLMKVRFLV RCGVSVDSLA ANSVIRVRSS NCKYRFRL
101: LTRFQLNQDL SLSTAFNVTI TAKNPNEKIG IYYEDGSKIS VLYMQTRISN GSLPKFYQGH ENTTIILVEM TGFTQNATSL MTTLQEQQRL TGSIPLRIRV
201: TQPVRIKLGK LKLMKVRFLV RCGVSVDSLA ANSVIRVRSS NCKYRFRL
Arabidopsis Description
NHL25NHL25 [Source:UniProtKB/TrEMBL;Acc:A0A178UFH9]
SUBAcon: [peroxisome,nucleus,plasma membrane]
SUBAcon: [peroxisome,nucleus,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.