Factsheet for Bra039737.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 4
plasma membrane 3
nucleus 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16419	Canola	plastid	99.19	99.19
AT1G65690.1	Thale cress	plasma membrane, plastid	81.05	79.76
Bra028103.1-P	Field mustard	cytosol, nucleus, plasma membrane	69.35	67.45
VIT_04s0069g01010.t01	Wine grape	plasma membrane	56.85	56.18
KRH72891	Soybean	nucleus, peroxisome, plasma membrane	57.26	55.69
KRH17244	Soybean	cytosol, peroxisome, plasma membrane	57.66	55.0
KRG98056	Soybean	cytosol, peroxisome, plasma membrane	53.63	54.51
KRH30725	Soybean	cytosol, nucleus, plasma membrane	54.03	54.47
GSMUA_Achr5P11970_001	Banana	cytosol, peroxisome, plasma membrane	51.61	52.03
Solyc02g036480.1.1	Tomato	nucleus	52.02	50.39
PGSC0003DMT400055257	Potato	plasma membrane, plastid	52.42	50.19
PGSC0003DMT400050761	Potato	cytosol, plasma membrane, vacuole	50.4	48.08
TraesCS1A01G167100.1	Wheat	cytosol, nucleus, peroxisome	47.18	46.25
GSMUA_Achr3P14210_001	Banana	plasma membrane	43.95	45.04
HORVU1Hr1G044080.1	Barley	cytosol, endoplasmic reticulum, peroxisome	46.77	44.62
TraesCS1B01G183500.1	Wheat	cytosol, nucleus, plasma membrane	47.18	43.98
GSMUA_Achr9P20600_001	Banana	nucleus, peroxisome, plasma membrane	42.34	43.75
TraesCS1D01G173800.1	Wheat	cytosol, nucleus, plasma membrane	46.37	43.23
OQU85155	Sorghum	extracellular, plasma membrane	31.85	40.31
KXG38271	Sorghum	cytosol, nucleus, vacuole	44.35	39.86
Bra027969.1-P	Field mustard	cytosol, peroxisome, plasma membrane	43.15	39.78
Os04t0677300-01	Rice	plastid	40.32	39.22
GSMUA_Achr1P17720_001	Banana	plasma membrane	42.74	38.97
EES13101	Sorghum	cytosol	38.71	38.87
TraesCS2A01G593300.1	Wheat	peroxisome	39.52	38.74
Zm00001d013947_P001	Maize	cytosol	41.13	38.49
HORVU2Hr1G119500.1	Barley	peroxisome	38.71	38.1
Solyc02g081450.2.1	Tomato	cytosol, plasma membrane, vacuole	50.0	38.04
Zm00001d032620_P001	Maize	cytosol	41.94	37.96
TraesCS2D01G561400.1	Wheat	peroxisome	38.71	37.94
TraesCS2B01G591000.1	Wheat	peroxisome	38.71	37.8
Zm00001d001832_P001	Maize	plastid	37.5	37.05
TraesCS4A01G217000.1	Wheat	cytosol, endoplasmic reticulum, peroxisome, plastid	32.26	35.4
TraesCS4D01G091900.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	31.45	34.51
OQU90204	Sorghum	mitochondrion, plastid	30.24	34.4
TraesCS4A01G216800.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	30.65	34.39
TraesCS4B01G095400.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	31.85	34.05
HORVU4Hr1G018760.1	Barley	cytosol, endoplasmic reticulum, peroxisome	31.45	33.33
TraesCS4D01G092200.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	30.24	33.33
TraesCS4B01G095300.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	30.24	33.19
EES06862	Sorghum	peroxisome	29.44	30.93
Bra000526.1-P	Field mustard	cytosol, peroxisome, plasma membrane	31.85	30.86
Bra034321.1-P	Field mustard	cytosol, peroxisome, plasma membrane	30.24	28.85
Os02t0507900-00	Rice	cytosol	28.63	28.4
HORVU4Hr1G018720.1	Barley	cytosol	14.52	23.08
Bra020148.1-P	Field mustard	cytosol	27.02	22.87
OQU88420	Sorghum	mitochondrion	31.45	22.35
Bra020147.1-P	Field mustard	cytosol	25.81	21.12
Bra006594.1-P	Field mustard	nucleus	25.0	20.53

Protein Annotations

MapMan:35.1	EnsemblPlantsGene:Bra039737	EnsemblPlants:Bra039737.1	EnsemblPlants:Bra039737.1-P	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005886	GO:GO:0006629	GO:GO:0006950
GO:GO:0006970	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009719
GO:GO:0009737	GO:GO:0009987	GO:GO:0010116	GO:GO:0016020	GO:GO:0016021	GO:GO:0019748
GO:GO:1902074	InterPro:LEA_2	UniProt:M4FF65	PFAM:PF03168	PANTHER:PTHR31852	PANTHER:PTHR31852:SF1
SUPFAM:SSF117070	TMHMM:TMhelix	UniParc:UPI000254593F	SEG:seg	:	:

Description

AT1G65690 (E=4e-097) | harpin-induced protein-related / HIN1-related / harpin-responsive protein-related

Coordinates

chrA02:-:9663074..9664062

Molecular Weight (calculated)

27629.5 Da

IEP (calculated)

9.729

GRAVY (calculated)

-0.212

Length

248 amino acids

Sequence
(BLAST)

001: MSRHPKIHPD ASSARPSAPL VPRAASRSEQ GDPSKRTLTQ RSTYAPLAPP RKRGRSCCCR CVCYTLCLLF LLVVAVGATI GILYLVLKPK LPDYSIDRLQ
101: LTQFALNQDS SLSTAFNVTI TAKNPNEKIG IYYEDGSEIT VWYNETKLSE GSLPKFYQGH ENTTVIDVQM SGQSQDATGI MSTLEEQQQT TGNIPLRLRV
201: DQPVRIKFGK LKLMEVRFLV RCGVFVDSLA ANNVIKIQSS SCKFRLRL

Best Arabidopsis Sequence Match ( AT1G65690.1 )
(BLAST)

001: MSQHQKIYPV QDPEAATARP TAPLVPRGSS RSEHGDPSKV PLNQRPQRFV PLAPPKKRRS CCCRCFCYTF CFLLLLVVAV GASIGILYLV FKPKLPDYSI
101: DRLQLTRFAL NQDSSLTTAF NVTITAKNPN EKIGIYYEDG SKITVWYMEH QLSNGSLPKF YQGHENTTVI YVEMTGQTQN ASGLRTTLEE QQQRTGNIPL
201: RIRVNQPVRV KFGKLKLFEV RFLVRCGVFV DSLATNNVIK IQSSSCKFRL RL

Arabidopsis Description

NHL6NDR1/HIN1-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LD98]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.