Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • plastid 1
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY09101 Canola cytosol 98.29 98.29
Bra020147.1-P Field mustard cytosol 89.76 86.8
Bra006594.1-P Field mustard nucleus 67.58 65.56
AT5G21130.1 Thale cress cytosol 57.0 59.43
Bra034321.1-P Field mustard cytosol, peroxisome, plasma membrane 39.25 44.23
PGSC0003DMT400005086 Potato plastid 36.52 40.68
Bra000526.1-P Field mustard cytosol, peroxisome, plasma membrane 35.15 40.23
Solyc01g009160.2.1 Tomato plastid 35.84 39.77
KRH73453 Soybean plastid 36.86 39.56
KRH14686 Soybean plastid 36.52 39.19
VIT_06s0009g01620.t01 Wine grape plasma membrane, plastid 35.49 38.95
PGSC0003DMT400022474 Potato plastid 35.49 38.52
Os12t0127200-01 Rice extracellular, plasma membrane, vacuole 32.08 34.18
GSMUA_Achr3P03620_001 Banana cytosol, peroxisome, vacuole 30.72 34.09
GSMUA_Achr11P... Banana cytosol, peroxisome, vacuole 31.06 33.96
Os11t0130400-01 Rice extracellular, peroxisome, vacuole 31.4 33.33
TraesCS4D01G124700.1 Wheat cytosol, extracellular, plasma membrane 31.06 33.21
TraesCSU01G191800.1 Wheat cytosol, extracellular, plasma membrane 30.38 32.72
TraesCSU01G059700.1 Wheat cytosol, extracellular, plasma membrane 30.38 32.72
TraesCS2A01G489400.1 Wheat cytosol, extracellular, plasma membrane 29.35 32.21
TraesCS2A01G489300.1 Wheat cytosol, extracellular, plasma membrane 29.01 32.08
TraesCS4B01G128000.1 Wheat cytosol, extracellular, plasma membrane 29.69 31.75
TraesCS5A01G141200.1 Wheat cytosol, extracellular, peroxisome 30.72 31.69
TraesCS5D01G151200.1 Wheat cytosol, extracellular, plasma membrane 30.72 31.58
TraesCS5B01G139500.1 Wheat cytosol, extracellular, peroxisome 30.38 31.45
Zm00001d005010_P001 Maize plastid 30.03 30.99
OQU87732 Sorghum cytosol 31.06 30.85
HORVU4Hr1G026770.2 Barley cytosol, plasma membrane 31.06 30.13
TraesCS3A01G336800.1 Wheat cytosol 29.69 29.69
EES15581 Sorghum cytosol, mitochondrion, peroxisome 30.72 29.51
HORVU0Hr1G010640.1 Barley cytosol, peroxisome 30.38 29.09
Zm00001d043128_P001 Maize cytosol 29.01 28.72
TraesCS3D01G329800.1 Wheat cytosol 29.35 28.01
TraesCS1B01G251100.1 Wheat endoplasmic reticulum, plasma membrane, plastid 23.55 27.49
Bra039737.1-P Field mustard plasma membrane, plastid 22.87 27.02
Os01t0812100-01 Rice cytosol, mitochondrion, peroxisome 30.72 25.94
TraesCS3B01G367900.1 Wheat cytosol, endoplasmic reticulum, peroxisome, plastid 29.01 25.76
Bra028103.1-P Field mustard cytosol, nucleus, plasma membrane 21.84 25.1
EES09185 Sorghum plastid 32.08 23.74
HORVU5Hr1G058740.3 Barley cytosol, plastid 13.31 23.08
Bra027969.1-P Field mustard cytosol, peroxisome, plasma membrane 21.16 23.05
HORVU3Hr1G079540.2 Barley plastid 30.72 22.84
Zm00001d028765_P001 Maize plastid 23.21 21.79
HORVU6Hr1G013910.1 Barley mitochondrion 25.94 20.27
Protein Annotations
EnsemblPlants:Bra020148.1EnsemblPlants:Bra020148.1-PEnsemblPlantsGene:Bra020148GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:LEA_2PANTHER:PTHR31852PANTHER:PTHR31852:SF0PFAM:PF03168SEG:segTMHMM:TMhelix
UniParc:UPI000254341CUniProt:M4DUF5MapMan:35.1:::
Description
AT5G21130 (E=4e-078) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Harpin-induced 1 (InterPro:IPR010847); BEST Arabidopsis thaliana protein match is: harpin-induced protein-related / HIN1-related / harpin-responsive protein-related (TAIR:AT2G27080.2); Has 592 Blast hits to 591 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 592; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Coordinates
chrA02:+:5269527..5270408
Molecular Weight (calculated)
31919.5 Da
IEP (calculated)
9.742
GRAVY (calculated)
-0.156
Length
293 amino acids
Sequence
(BLAST)
001: MAGDGSTQRS PKNTDVLITD KNIPKTKHLS IDTNDSVPRS PRSSGGFTNA SRLSVDSQRP KPPSPGTYLV QIPREQIYRV PPPENARRYE DLSRRKPNRS
101: ACRRCCCYSL TVLLVLVTLA AVLVGIFFLV FRPHKPMFSV SGVSVAGINL TSSTSLISSL VEVKVRSENV NEKLGLIYGG GSAAEIFYDG AKLGDGEFTA
201: FDQPPENVTV TLTTLRGSRI QLTSSTLEDL KESEKKGKVP FDLRVKAPFK FKVSAVTMWT MAGTVDCKLT VDKLTSSATV ITENCVTEGI ILL
Best Arabidopsis Sequence Match ( AT5G21130.1 )
(BLAST)
001: MTVEKPQEMT GDTNSDGFLT NKDVHRIKHP SLDTNDSSSS RYSVDSQKSR IGPPPGTYVI KLPKDQIYRV PPPENAHRYE YLSRRKTNKS CCRRCLCYSL
101: SALLIIIVLA AIAFGFFYLV YQPHKPQFSV SGVSVTGINL TSSSPFSPVI RIKLRSQNVK GKLGLIYEKG NEADVFFNGT KLGNGEFTAF KQPAGNVTVI
201: VTVLKGSSVK LKSSSRKELT ESQKKGKVPF GLRIKAPVKF KVGSVTTWTM TITVDCKITV DKLTASATVK TENCETGLSL L
Arabidopsis Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Source:UniProtKB/TrEMBL;Acc:Q84VP8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.