Factsheet for GSMUA_Achr11P10400_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:

nucleus 2
vacuole 2
plastid 1
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, vacuole
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	vacuole
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P03620_001	Banana	cytosol, peroxisome, vacuole	71.27	72.35
KRH14686	Soybean	plastid	47.39	46.52
VIT_06s0009g01620.t01	Wine grape	plasma membrane, plastid	45.9	46.07
KRH73453	Soybean	plastid	46.27	45.42
Os12t0127200-01	Rice	extracellular, plasma membrane, vacuole	45.15	44.0
PGSC0003DMT400005086	Potato	plastid	42.91	43.73
Os11t0130400-01	Rice	extracellular, peroxisome, vacuole	44.4	43.12
Bra034321.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.67	41.92
PGSC0003DMT400022474	Potato	plastid	42.16	41.85
CDY48196	Canola	cytosol, peroxisome, plasma membrane	40.3	41.54
OQU87732	Sorghum	cytosol	45.15	41.02
CDX77067	Canola	cytosol, peroxisome, plasma membrane, plastid	39.55	40.77
TraesCS4D01G124700.1	Wheat	cytosol, extracellular, plasma membrane	41.42	40.51
TraesCS2A01G489300.1	Wheat	cytosol, extracellular, plasma membrane	39.93	40.38
TraesCS3A01G336800.1	Wheat	cytosol	43.66	39.93
TraesCS2A01G489400.1	Wheat	cytosol, extracellular, plasma membrane	39.55	39.7
AT2G27080.1	Thale cress	cytosol, peroxisome, plasma membrane	38.43	39.62
TraesCS3D01G329800.1	Wheat	cytosol	45.15	39.41
EES15581	Sorghum	cytosol, mitochondrion, peroxisome	44.78	39.34
TraesCS5D01G151200.1	Wheat	cytosol, extracellular, plasma membrane	41.79	39.3
TraesCS5B01G139500.1	Wheat	cytosol, extracellular, peroxisome	41.42	39.22
TraesCS5A01G141200.1	Wheat	cytosol, extracellular, peroxisome	41.42	39.08
Zm00001d005010_P001	Maize	plastid	41.42	39.08
CDX83252	Canola	cytosol, peroxisome, plasma membrane	37.31	39.06
Bra000526.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.31	39.06
Solyc01g009160.2.1	Tomato	plastid	38.43	39.02
TraesCSU01G059700.1	Wheat	cytosol, extracellular, plasma membrane	39.55	38.97
TraesCSU01G191800.1	Wheat	cytosol, extracellular, plasma membrane	39.55	38.97
CDY38543	Canola	cytosol, peroxisome, plasma membrane	36.94	38.67
TraesCS4B01G128000.1	Wheat	cytosol, extracellular, plasma membrane	39.18	38.32
Zm00001d043128_P001	Maize	cytosol	42.16	38.18
TraesCS1B01G251100.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	35.45	37.85
HORVU0Hr1G010640.1	Barley	cytosol, peroxisome	42.54	37.25
GSMUA_Achr9P20600_001	Banana	nucleus, peroxisome, plasma membrane	33.21	37.08
TraesCS3B01G367900.1	Wheat	cytosol, endoplasmic reticulum, peroxisome, plastid	45.15	36.67
HORVU4Hr1G026770.2	Barley	cytosol, plasma membrane	40.67	36.09
GSMUA_Achr5P11970_001	Banana	cytosol, peroxisome, plasma membrane	32.46	35.37
Os01t0812100-01	Rice	cytosol, mitochondrion, peroxisome	45.52	35.16
GSMUA_Achr3P14210_001	Banana	plasma membrane	30.97	34.3
HORVU5Hr1G058740.3	Barley	cytosol, plastid	20.9	33.14
Bra020147.1-P	Field mustard	cytosol	36.57	32.34
CDY09100	Canola	cytosol	36.19	32.01
CDY09101	Canola	cytosol	34.33	31.4
HORVU3Hr1G079540.2	Barley	plastid	45.9	31.22
Bra020148.1-P	Field mustard	cytosol	33.96	31.06
AT5G21130.1	Thale cress	cytosol	32.46	30.96
CDX70963	Canola	cytosol	33.58	29.8
GSMUA_Achr1P17720_001	Banana	plasma membrane	30.22	29.78
Bra006594.1-P	Field mustard	nucleus	33.21	29.47
CDX88825	Canola	cytosol	32.84	29.14
EES09185	Sorghum	plastid	42.16	28.54
HORVU6Hr1G013910.1	Barley	mitochondrion	38.81	27.73
Zm00001d028765_P001	Maize	plastid	32.09	27.56

Protein Annotations

EnsemblPlants:GSMUA_Achr11P10400_001	EnsemblPlants:GSMUA_Achr11T10400_001	EnsemblPlantsGene:GSMUA_Achr11G10400_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LEA_2	PANTHER:PTHR31852	PANTHER:PTHR31852:SF0	PFAM:PF03168	SEG:seg	SUPFAM:SSF117070
TMHMM:TMhelix	UniParc:UPI00029583C7	UniProt:M0RR20	MapMan:35.1	:	:

Description

NHL25, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G10400_001]

Coordinates

chr11:+:8227953..8228895

Molecular Weight (calculated)

29159.4 Da

IEP (calculated)

10.562

GRAVY (calculated)

-0.075

Length

268 amino acids

Sequence
(BLAST)

001: MSDRVHPVQP EPVTGATPET PRSSVPRSGN VDPKPGPQPG SYVIQVPKDL VLRTPPEGNA RRAKAYARRA ARRRRNCCCV LLAWLAALLV LLAAAAGVLY
101: LVFRPRAPDY SIDSLSIAPL NLSAAAVSPQ FNATVRADNP NKKVGIYYRH GSDIKVTYDG VTLCAGEWPA FYHAPRNETV FVAVLRGSDI RLSSANQQSL
201: LAAEAQGRQI PLRIDAKVPV RVKFGAVTSW TITVKVKCDI AVDKLTENAK IVSKNCHVKV KVFKFLGL

Best Arabidopsis Sequence Match ( AT2G27080.1 )
(BLAST)

001: MAERVYPADS PPQSGQFSGN FSSGEFPKKP APPPSTYVIQ VPKDQIYRIP PPENAHRFEQ LSRKKTNRSN CRCCFCSFLA AVFILIVLAG ISFAVLYLIY
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW

Arabidopsis Description

NHL13NDR1/HIN1-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD2]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.