Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G124700.1 | Wheat | cytosol, extracellular, plasma membrane | 85.43 | 94.16 |
| TraesCS2A01G489300.1 | Wheat | cytosol, extracellular, plasma membrane | 82.45 | 93.96 |
| TraesCS4B01G128000.1 | Wheat | cytosol, extracellular, plasma membrane | 83.77 | 92.34 |
| TraesCS2A01G489400.1 | Wheat | cytosol, extracellular, plasma membrane | 81.46 | 92.13 |
| TraesCSU01G059700.1 | Wheat | cytosol, extracellular, plasma membrane | 81.79 | 90.81 |
| TraesCSU01G191800.1 | Wheat | cytosol, extracellular, plasma membrane | 81.79 | 90.81 |
| Os12t0127200-01 | Rice | extracellular, plasma membrane, vacuole | 61.92 | 68.0 |
| Os11t0130400-01 | Rice | extracellular, peroxisome, vacuole | 61.92 | 67.75 |
| Zm00001d005010_P001 | Maize | plastid | 59.27 | 63.03 |
| HORVU0Hr1G010640.1 | Barley | cytosol, peroxisome | 60.6 | 59.8 |
| EES15581 | Sorghum | cytosol, mitochondrion, peroxisome | 58.94 | 58.36 |
| EES09185 | Sorghum | plastid | 63.24 | 48.23 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, vacuole | 36.09 | 40.67 |
| GSMUA_Achr3P03620_001 | Banana | cytosol, peroxisome, vacuole | 32.12 | 36.74 |
| VIT_06s0009g01620.t01 | Wine grape | plasma membrane, plastid | 32.12 | 36.33 |
| CDY48196 | Canola | cytosol, peroxisome, plasma membrane | 31.13 | 36.15 |
| Bra034321.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 31.13 | 36.15 |
| KRH14686 | Soybean | plastid | 32.45 | 35.9 |
| CDX77067 | Canola | cytosol, peroxisome, plasma membrane, plastid | 30.46 | 35.38 |
| PGSC0003DMT400022474 | Potato | plastid | 31.46 | 35.19 |
| PGSC0003DMT400005086 | Potato | plastid | 30.46 | 34.98 |
| KRH73453 | Soybean | plastid | 31.46 | 34.8 |
| CDX83252 | Canola | cytosol, peroxisome, plasma membrane | 29.47 | 34.77 |
| Bra000526.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 29.14 | 34.38 |
| HORVU1Hr1G044080.1 | Barley | cytosol, endoplasmic reticulum, peroxisome | 29.47 | 34.23 |
| CDY38543 | Canola | cytosol, peroxisome, plasma membrane | 28.48 | 33.59 |
| AT2G27080.1 | Thale cress | cytosol, peroxisome, plasma membrane | 28.15 | 32.69 |
| HORVU5Hr1G058740.3 | Barley | cytosol, plastid | 18.21 | 32.54 |
| HORVU3Hr1G079540.2 | Barley | plastid | 42.05 | 32.23 |
| Solyc01g009160.2.1 | Tomato | plastid | 28.15 | 32.2 |
| CDY09101 | Canola | cytosol | 30.46 | 31.4 |
| Bra020148.1-P | Field mustard | cytosol | 30.13 | 31.06 |
| CDX88825 | Canola | cytosol | 30.79 | 30.79 |
| Bra020147.1-P | Field mustard | cytosol | 30.79 | 30.69 |
| CDY09100 | Canola | cytosol | 30.79 | 30.69 |
| AT5G21130.1 | Thale cress | cytosol | 28.48 | 30.61 |
| Bra006594.1-P | Field mustard | nucleus | 30.46 | 30.46 |
| CDX70963 | Canola | cytosol | 29.8 | 29.8 |
| HORVU2Hr1G119500.1 | Barley | peroxisome | 24.83 | 29.76 |
| HORVU6Hr1G013910.1 | Barley | mitochondrion | 36.76 | 29.6 |
| HORVU5Hr1G052650.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 20.2 | 27.73 |
| HORVU4Hr1G018760.1 | Barley | cytosol, endoplasmic reticulum, peroxisome | 20.86 | 26.92 |
| HORVU4Hr1G018720.1 | Barley | cytosol | 12.25 | 23.72 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G026770.2 | EnsemblPlantsGene:HORVU4Hr1G026770 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:LEA_2 |
| PANTHER:PTHR31852 | PANTHER:PTHR31852:SF42 | PFAM:PF03168 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B473339 |
| UniProt:A0A287NMD2 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:161815292..161817408
Molecular Weight (calculated)
32186.0 Da
IEP (calculated)
10.792
GRAVY (calculated)
-0.047
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: EAAARELTLI SRLPDRASVT QAARGDPATP PMADRVHPAP LLPLSTPPAP PTDNSDAAAE TAPLRSTSTP APGASYIVHV PKDQVLRVPP PDRARRYSKL
101: AARPARRRML RRACCGACCA LLLLLALAAA FVGAVYLVFR PRAPSFSVTS LSVAGLLDPS PAKLHAAVRA DNGANKKVGV DYRGGGEVSV SYSGLLLATG
201: RWPAFYQAPR NVTLISMPLT GKGGVALTED QRGRLAEQAA AGAVPLTVEA RVPVRVRLGK VLRTWTVDVW ARCEVTVDRI DGETTAANRG CTVKAKPLWW
301: WW
101: AARPARRRML RRACCGACCA LLLLLALAAA FVGAVYLVFR PRAPSFSVTS LSVAGLLDPS PAKLHAAVRA DNGANKKVGV DYRGGGEVSV SYSGLLLATG
201: RWPAFYQAPR NVTLISMPLT GKGGVALTED QRGRLAEQAA AGAVPLTVEA RVPVRVRLGK VLRTWTVDVW ARCEVTVDRI DGETTAANRG CTVKAKPLWW
301: WW
001: MAERVYPADS PPQSGQFSGN FSSGEFPKKP APPPSTYVIQ VPKDQIYRIP PPENAHRFEQ LSRKKTNRSN CRCCFCSFLA AVFILIVLAG ISFAVLYLIY
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW
Arabidopsis Description
NHL13NDR1/HIN1-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD2]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.