Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 4
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400022474 | Potato | plastid | 93.94 | 91.85 |
| VIT_06s0009g01620.t01 | Wine grape | plasma membrane, plastid | 54.55 | 53.93 |
| CDY48196 | Canola | cytosol, peroxisome, plasma membrane | 50.76 | 51.54 |
| Bra034321.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 50.38 | 51.15 |
| CDX77067 | Canola | cytosol, peroxisome, plasma membrane, plastid | 50.38 | 51.15 |
| AT2G27080.1 | Thale cress | cytosol, peroxisome, plasma membrane | 49.62 | 50.38 |
| KRH14686 | Soybean | plastid | 51.14 | 49.45 |
| KRH73453 | Soybean | plastid | 50.76 | 49.08 |
| CDY38543 | Canola | cytosol, peroxisome, plasma membrane | 45.45 | 46.88 |
| Bra000526.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 44.7 | 46.09 |
| CDX83252 | Canola | cytosol, peroxisome, plasma membrane | 43.94 | 45.31 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, vacuole | 39.02 | 38.43 |
| GSMUA_Achr3P03620_001 | Banana | cytosol, peroxisome, vacuole | 38.26 | 38.26 |
| AT5G21130.1 | Thale cress | cytosol | 40.53 | 38.08 |
| Bra006594.1-P | Field mustard | nucleus | 41.29 | 36.09 |
| CDY09100 | Canola | cytosol | 41.29 | 35.97 |
| CDY09101 | Canola | cytosol | 39.77 | 35.84 |
| Bra020148.1-P | Field mustard | cytosol | 39.77 | 35.84 |
| CDX88825 | Canola | cytosol | 40.91 | 35.76 |
| Bra020147.1-P | Field mustard | cytosol | 40.91 | 35.64 |
| Os12t0127200-01 | Rice | extracellular, plasma membrane, vacuole | 37.12 | 35.64 |
| CDX70963 | Canola | cytosol | 40.15 | 35.1 |
| Os11t0130400-01 | Rice | extracellular, peroxisome, vacuole | 35.98 | 34.42 |
| TraesCS5D01G151200.1 | Wheat | cytosol, extracellular, plasma membrane | 37.12 | 34.39 |
| OQU87732 | Sorghum | cytosol | 38.26 | 34.24 |
| Zm00001d005010_P001 | Maize | plastid | 36.74 | 34.15 |
| TraesCS5A01G141200.1 | Wheat | cytosol, extracellular, peroxisome | 36.36 | 33.8 |
| TraesCS5B01G139500.1 | Wheat | cytosol, extracellular, peroxisome | 35.61 | 33.22 |
| TraesCS3A01G336800.1 | Wheat | cytosol | 36.36 | 32.76 |
| Zm00001d043128_P001 | Maize | cytosol | 36.36 | 32.43 |
| TraesCS2A01G489300.1 | Wheat | cytosol, extracellular, plasma membrane | 31.82 | 31.7 |
| HORVU0Hr1G010640.1 | Barley | cytosol, peroxisome | 36.36 | 31.37 |
| TraesCSU01G191800.1 | Wheat | cytosol, extracellular, plasma membrane | 32.2 | 31.25 |
| TraesCSU01G059700.1 | Wheat | cytosol, extracellular, plasma membrane | 32.2 | 31.25 |
| TraesCS2A01G489400.1 | Wheat | cytosol, extracellular, plasma membrane | 31.44 | 31.09 |
| TraesCS4D01G124700.1 | Wheat | cytosol, extracellular, plasma membrane | 32.2 | 31.02 |
| TraesCS3D01G329800.1 | Wheat | cytosol | 35.61 | 30.62 |
| EES15581 | Sorghum | cytosol, mitochondrion, peroxisome | 34.85 | 30.16 |
| Solyc02g036480.1.1 | Tomato | nucleus | 29.17 | 30.08 |
| Solyc03g019920.1.1 | Tomato | plastid | 28.03 | 29.96 |
| TraesCS4B01G128000.1 | Wheat | cytosol, extracellular, plasma membrane | 31.06 | 29.93 |
| TraesCS1B01G251100.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 28.41 | 29.88 |
| Os01t0812100-01 | Rice | cytosol, mitochondrion, peroxisome | 39.02 | 29.68 |
| TraesCS3B01G367900.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome, plastid | 35.98 | 28.79 |
| HORVU5Hr1G058740.3 | Barley | cytosol, plastid | 18.18 | 28.4 |
| HORVU4Hr1G026770.2 | Barley | cytosol, plasma membrane | 32.2 | 28.15 |
| EES09185 | Sorghum | plastid | 38.26 | 25.51 |
| Solyc02g081450.2.1 | Tomato | cytosol, plasma membrane, vacuole | 31.44 | 25.46 |
| HORVU3Hr1G079540.2 | Barley | plastid | 36.74 | 24.62 |
| Solyc07g054250.2.1 | Tomato | cytosol, nucleus, plastid | 24.24 | 23.62 |
| Zm00001d028765_P001 | Maize | plastid | 25.76 | 21.79 |
| HORVU6Hr1G013910.1 | Barley | mitochondrion | 28.41 | 20.0 |
Protein Annotations
| EnsemblPlants:Solyc01g009160.2.1 | EnsemblPlantsGene:Solyc01g009160.2 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:LEA_2 |
| PANTHER:PTHR31852 | PANTHER:PTHR31852:SF0 | PFAM:PF03168 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002763517 |
| UniProt:K4ATB2 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:3172415..3173564
Molecular Weight (calculated)
29114.5 Da
IEP (calculated)
10.375
GRAVY (calculated)
-0.119
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLPSSSSNP PSSNNSGEVV SPKKPSFPSP AKPIQPPAGT YVVQVPKDQI YKYPPPENSR RYESLTKRKP RRSCCCRCLC FTFSVLLFLI ISIGITAGVL
101: FLVYRPEAPK YTISSIAIKN FNVTSSSKIS PEFDISVRSE NPNNKLGIYY RKGSSVTVVY SGVDLSAGVL PAFYQPVNNV TVFQTALKGS NVILGNAVKS
201: TLRNEQRKGK VPFRVNIKAP VKIKIGAVKT WEVIVKVKCD LTVDVLTVKS KLVSKDCDYS VRLW
101: FLVYRPEAPK YTISSIAIKN FNVTSSSKIS PEFDISVRSE NPNNKLGIYY RKGSSVTVVY SGVDLSAGVL PAFYQPVNNV TVFQTALKGS NVILGNAVKS
201: TLRNEQRKGK VPFRVNIKAP VKIKIGAVKT WEVIVKVKCD LTVDVLTVKS KLVSKDCDYS VRLW
001: MAERVYPADS PPQSGQFSGN FSSGEFPKKP APPPSTYVIQ VPKDQIYRIP PPENAHRFEQ LSRKKTNRSN CRCCFCSFLA AVFILIVLAG ISFAVLYLIY
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW
Arabidopsis Description
NHL13NDR1/HIN1-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD2]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.