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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 2
  • plasma membrane 2
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • cytosol 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY48196 Canola cytosol, peroxisome, plasma membrane 99.62 99.62
Bra000526.1-P Field mustard cytosol, peroxisome, plasma membrane 81.92 83.2
AT2G27080.1 Thale cress cytosol, peroxisome, plasma membrane 81.92 81.92
KRH14686 Soybean plastid 59.62 56.78
PGSC0003DMT400005086 Potato plastid 56.54 55.89
KRH73453 Soybean plastid 58.08 55.31
VIT_06s0009g01620.t01 Wine grape plasma membrane, plastid 55.38 53.93
PGSC0003DMT400022474 Potato plastid 55.38 53.33
Solyc01g009160.2.1 Tomato plastid 51.15 50.38
Bra006594.1-P Field mustard nucleus 49.23 42.38
GSMUA_Achr3P03620_001 Banana cytosol, peroxisome, vacuole 41.92 41.29
GSMUA_Achr11P... Banana cytosol, peroxisome, vacuole 41.92 40.67
Bra020148.1-P Field mustard cytosol 44.23 39.25
Bra020147.1-P Field mustard cytosol 45.38 38.94
OQU87732 Sorghum cytosol 42.31 37.29
Os11t0130400-01 Rice extracellular, peroxisome, vacuole 38.46 36.23
Os12t0127200-01 Rice extracellular, plasma membrane, vacuole 38.08 36.0
TraesCS3A01G336800.1 Wheat cytosol 40.38 35.84
TraesCS3D01G329800.1 Wheat cytosol 41.15 34.85
TraesCS2A01G489300.1 Wheat cytosol, extracellular, plasma membrane 35.38 34.72
TraesCS4D01G124700.1 Wheat cytosol, extracellular, plasma membrane 36.54 34.67
TraesCSU01G191800.1 Wheat cytosol, extracellular, plasma membrane 36.15 34.56
TraesCSU01G059700.1 Wheat cytosol, extracellular, plasma membrane 36.15 34.56
TraesCS2A01G489400.1 Wheat cytosol, extracellular, plasma membrane 35.38 34.46
TraesCS5D01G151200.1 Wheat cytosol, extracellular, plasma membrane 37.69 34.39
Zm00001d005010_P001 Maize plastid 37.31 34.15
TraesCS5A01G141200.1 Wheat cytosol, extracellular, peroxisome 37.31 34.15
Zm00001d043128_P001 Maize cytosol 38.46 33.78
TraesCS4B01G128000.1 Wheat cytosol, extracellular, plasma membrane 35.38 33.58
TraesCS1B01G251100.1 Wheat endoplasmic reticulum, plasma membrane, plastid 31.92 33.07
TraesCS5B01G139500.1 Wheat cytosol, extracellular, peroxisome 35.77 32.86
TraesCS3B01G367900.1 Wheat cytosol, endoplasmic reticulum, peroxisome, plastid 40.0 31.52
EES15581 Sorghum cytosol, mitochondrion, peroxisome 36.92 31.48
HORVU0Hr1G010640.1 Barley cytosol, peroxisome 36.92 31.37
HORVU4Hr1G026770.2 Barley cytosol, plasma membrane 36.15 31.13
Os01t0812100-01 Rice cytosol, mitochondrion, peroxisome 41.15 30.84
Bra039737.1-P Field mustard plasma membrane, plastid 28.85 30.24
Bra028103.1-P Field mustard cytosol, nucleus, plasma membrane 29.62 30.2
HORVU5Hr1G058740.3 Barley cytosol, plastid 18.46 28.4
HORVU3Hr1G079540.2 Barley plastid 41.92 27.66
Bra027969.1-P Field mustard cytosol, peroxisome, plasma membrane 28.46 27.51
EES09185 Sorghum plastid 40.0 26.26
HORVU6Hr1G013910.1 Barley mitochondrion 31.92 22.13
Zm00001d028765_P001 Maize plastid 26.15 21.79
Protein Annotations
EnsemblPlants:Bra034321.1EnsemblPlants:Bra034321.1-PEnsemblPlantsGene:Bra034321GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:LEA_2PANTHER:PTHR31852PANTHER:PTHR31852:SF0PFAM:PF03168SEG:segTMHMM:TMhelix
UniParc:UPI0002543891UniProt:M4EZS8MapMan:35.1:::
Description
AT2G27080 (E=8e-119) | harpin-induced protein-related / HIN1-related / harpin-responsive protein-related
Coordinates
chrA04:+:11881957..11882739
Molecular Weight (calculated)
28596.6 Da
IEP (calculated)
10.369
GRAVY (calculated)
-0.179
Length
260 amino acids
Sequence
(BLAST)
001: MAERVHPADS PPQSGQFSGN FSSGEFPRKP APPPATYVIQ VPKDQIYRVP PPENAHRLQL LSRKKPNRSR CRCCFCYFLA AIFTLAVLAA ISFAVLYAVF
101: RPEAPKYSVE GFSVSGINLT SPSPVSPRFN VTVRSRNGNG KLGIYYEKGS SVDVFYGDVD LCNGALPVFY QPANNVTLVK TALTGSGIQL NSGARKEMRN
201: ELSKKTVPFK VRIKAPVKIK VGSVKTWTIT VKVNCDVTVD KLTAPSRIVS RKCSHDVDLW
Best Arabidopsis Sequence Match ( AT2G27080.1 )
(BLAST)
001: MAERVYPADS PPQSGQFSGN FSSGEFPKKP APPPSTYVIQ VPKDQIYRIP PPENAHRFEQ LSRKKTNRSN CRCCFCSFLA AVFILIVLAG ISFAVLYLIY
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW
Arabidopsis Description
NHL13NDR1/HIN1-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD2]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.