CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005010_P001	Maize	plastid	58.08	80.99
Os12t0127200-01	Rice	extracellular, plasma membrane, vacuole	49.49	71.27
Os11t0130400-01	Rice	extracellular, peroxisome, vacuole	49.24	70.65
TraesCS5A01G141200.1	Wheat	cytosol, extracellular, peroxisome	47.73	66.55
TraesCS4D01G124700.1	Wheat	cytosol, extracellular, plasma membrane	45.71	66.06
TraesCSU01G191800.1	Wheat	cytosol, extracellular, plasma membrane	45.2	65.81
TraesCSU01G059700.1	Wheat	cytosol, extracellular, plasma membrane	45.2	65.81
TraesCS5B01G139500.1	Wheat	cytosol, extracellular, peroxisome	46.72	65.37
TraesCS4B01G128000.1	Wheat	cytosol, extracellular, plasma membrane	44.95	64.96
TraesCS5D01G151200.1	Wheat	cytosol, extracellular, plasma membrane	46.72	64.91
TraesCS2A01G489300.1	Wheat	cytosol, extracellular, plasma membrane	43.43	64.91
EES15581	Sorghum	cytosol, mitochondrion, peroxisome	49.75	64.59
HORVU0Hr1G010640.1	Barley	cytosol, peroxisome	49.49	64.05
TraesCS2A01G489400.1	Wheat	cytosol, extracellular, plasma membrane	42.68	63.3
HORVU4Hr1G026770.2	Barley	cytosol, plasma membrane	48.23	63.24
GSMUA_Achr11P...	Banana	cytosol, peroxisome, vacuole	28.54	42.16
VIT_06s0009g01620.t01	Wine grape	plasma membrane, plastid	27.78	41.2
PGSC0003DMT400022474	Potato	plastid	28.03	41.11
OQU87732	Sorghum	cytosol	30.3	40.68
Bra034321.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.26	40.0
CDY48196	Canola	cytosol, peroxisome, plasma membrane	26.26	40.0
CDX77067	Canola	cytosol, peroxisome, plasma membrane, plastid	26.01	39.62
KRH14686	Soybean	plastid	27.02	39.19
PGSC0003DMT400005086	Potato	plastid	26.01	39.16
GSMUA_Achr3P03620_001	Banana	cytosol, peroxisome, vacuole	25.76	38.64
Solyc01g009160.2.1	Tomato	plastid	25.51	38.26
KRH73453	Soybean	plastid	26.26	38.1
AT2G27080.1	Thale cress	cytosol, peroxisome, plasma membrane	24.49	37.31
Bra000526.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.74	36.72
CDX83252	Canola	cytosol, peroxisome, plasma membrane	23.48	36.33
CDY38543	Canola	cytosol, peroxisome, plasma membrane	23.23	35.94
OQU85155	Sorghum	extracellular, plasma membrane	16.67	33.67
KXG38271	Sorghum	cytosol, nucleus, vacuole	22.73	32.61
CDY09101	Canola	cytosol	23.99	32.42
Bra020148.1-P	Field mustard	cytosol	23.74	32.08
Bra020147.1-P	Field mustard	cytosol	24.49	32.01
CDY09100	Canola	cytosol	24.49	32.01
AT5G21130.1	Thale cress	cytosol	22.47	31.67
EES13101	Sorghum	cytosol	19.44	31.17
Bra006594.1-P	Field mustard	nucleus	23.48	30.79
CDX88825	Canola	cytosol	23.23	30.46
CDX70963	Canola	cytosol	22.73	29.8
OQU90204	Sorghum	mitochondrion, plastid	15.66	28.44
EER98613	Sorghum	endoplasmic reticulum, plasma membrane, plastid	14.65	27.88
EES06862	Sorghum	peroxisome	14.14	23.73
OQU88420	Sorghum	mitochondrion	16.41	18.62

Protein Annotations

EnsemblPlants:EES09185	EnsemblPlantsGene:SORBI_3005G021800	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:LEA_2
PANTHER:PTHR31852	PANTHER:PTHR31852:SF42	PFAM:PF03168	ProteinID:EES09185	ProteinID:EES09185.2	SEG:seg
TMHMM:TMhelix	UniParc:UPI00081AD2BE	UniProt:C5Y3Z3	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr5:-:1998077..1999947

Molecular Weight (calculated)

43541.6 Da

IEP (calculated)

12.070

GRAVY (calculated)

-0.318

Length

396 amino acids

Sequence
(BLAST)

001: MTVSLVSFSF FLPSFLLPRR RRRTRPPLLD RPHASIKRRA QRSLPRHFRL ARLSSVSERR ESSQPPCCTS TVPSPPHHRR PFLPFHFHYR RTMADRVHPA
101: PPPPPPPALI SSSSPPHQQQ PHDQHAGAAG AVPPPPAPTT DTTPLQQHPS FARPAAPPPG TYIVQVPKDQ VLRVPPPDRA RRYKKLSSRP ARRRALRRAC
201: CCAIAIVLLL VALAAAFVGA VYLIYRPRAP SFSVASLSIH GLNTTSLSSS LSPRLDAVVR ADNARNKKVG IEYRGGGEVA VSYDSGGSGA RLAAGAWPAF
301: RQPPRNVTAF AVSMTGNGVR LTEDQAKRIA TEQAAGAVPL QVEATLHVRL RFGGVLRTWT VDVRARCDVA VDRLDGDAVA VNRGCKVKVR PLWWWW

Best Arabidopsis Sequence Match ( AT2G27080.1 )
(BLAST)

001: MAERVYPADS PPQSGQFSGN FSSGEFPKKP APPPSTYVIQ VPKDQIYRIP PPENAHRFEQ LSRKKTNRSN CRCCFCSFLA AVFILIVLAG ISFAVLYLIY
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW

Arabidopsis Description

NHL13NDR1/HIN1-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD2]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.