Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043128_P001 | Maize | cytosol | 76.95 | 76.69 |
| TraesCS3A01G336800.1 | Wheat | cytosol | 68.81 | 69.28 |
| TraesCS3D01G329800.1 | Wheat | cytosol | 69.83 | 67.1 |
| TraesCS3B01G367900.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome, plastid | 70.17 | 62.73 |
| Os01t0812100-01 | Rice | cytosol, mitochondrion, peroxisome | 70.51 | 59.94 |
| TraesCS1B01G251100.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 49.15 | 57.77 |
| HORVU5Hr1G058740.3 | Barley | cytosol, plastid | 30.17 | 52.66 |
| HORVU3Hr1G079540.2 | Barley | plastid | 69.83 | 52.28 |
| Zm00001d028765_P001 | Maize | plastid | 48.14 | 45.51 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, vacuole | 41.02 | 45.15 |
| KRH73453 | Soybean | plastid | 41.02 | 44.32 |
| KRH14686 | Soybean | plastid | 40.34 | 43.59 |
| GSMUA_Achr3P03620_001 | Banana | cytosol, peroxisome, vacuole | 38.98 | 43.56 |
| HORVU6Hr1G013910.1 | Barley | mitochondrion | 53.9 | 42.4 |
| CDY48196 | Canola | cytosol, peroxisome, plasma membrane | 37.29 | 42.31 |
| Bra034321.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 37.29 | 42.31 |
| CDX77067 | Canola | cytosol, peroxisome, plasma membrane, plastid | 36.27 | 41.15 |
| Bra000526.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 35.25 | 40.62 |
| CDX83252 | Canola | cytosol, peroxisome, plasma membrane | 35.25 | 40.62 |
| VIT_06s0009g01620.t01 | Wine grape | plasma membrane, plastid | 36.61 | 40.45 |
| EES15581 | Sorghum | cytosol, mitochondrion, peroxisome | 41.69 | 40.33 |
| CDY38543 | Canola | cytosol, peroxisome, plasma membrane | 34.92 | 40.23 |
| AT2G27080.1 | Thale cress | cytosol, peroxisome, plasma membrane | 35.25 | 40.0 |
| PGSC0003DMT400022474 | Potato | plastid | 36.61 | 40.0 |
| PGSC0003DMT400005086 | Potato | plastid | 34.58 | 38.78 |
| Solyc01g009160.2.1 | Tomato | plastid | 34.24 | 38.26 |
| OQU85155 | Sorghum | extracellular, plasma membrane | 24.75 | 37.24 |
| CDY09100 | Canola | cytosol | 33.56 | 32.67 |
| Bra020147.1-P | Field mustard | cytosol | 33.22 | 32.34 |
| KXG38271 | Sorghum | cytosol, nucleus, vacuole | 30.17 | 32.25 |
| CDY09101 | Canola | cytosol | 31.53 | 31.74 |
| CDX88825 | Canola | cytosol | 32.2 | 31.46 |
| Bra006594.1-P | Field mustard | nucleus | 32.2 | 31.46 |
| AT5G21130.1 | Thale cress | cytosol | 29.83 | 31.32 |
| OQU90204 | Sorghum | mitochondrion, plastid | 23.05 | 31.19 |
| CDX70963 | Canola | cytosol | 31.86 | 31.13 |
| Bra020148.1-P | Field mustard | cytosol | 30.85 | 31.06 |
| EES13101 | Sorghum | cytosol | 25.76 | 30.77 |
| EER98613 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 21.69 | 30.77 |
| EES09185 | Sorghum | plastid | 40.68 | 30.3 |
| EES06862 | Sorghum | peroxisome | 23.05 | 28.81 |
| OQU88420 | Sorghum | mitochondrion | 21.69 | 18.34 |
Protein Annotations
| EnsemblPlants:OQU87732 | EnsemblPlantsGene:SORBI_3003G331500 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:LEA_2 |
| PANTHER:PTHR31852 | PANTHER:PTHR31852:SF0 | PFAM:PF03168 | ProteinID:OQU87732 | ProteinID:OQU87732.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0009DC9166 | UniProt:A0A1W0W035 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr3:+:65627767..65628666
Molecular Weight (calculated)
31496.6 Da
IEP (calculated)
10.679
GRAVY (calculated)
-0.187
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MMHGGNGHGH GRVHPASSSS DFSGEMNQSV SDPSSSPLYS FHFEKPVPQH HPPPGAYVVQ VPKDKVFRVP PPENARLFDH YTRRAKRRRG RSCARVCACM
101: LAGAVALAVL AAALAGVAYL VLRPKQPAYT VQALAVSGLA GLGNASSSSS SSSPVAFSPG FDATVRADNP NGRIGVRYEG GRSRVSVSYD GVPLADGDGA
201: WPAFYQGPRN VTVFVAKAKG SGIRFSQRVR GQMAAAERLR SVPFDVDVEV PLGKVRTWAV PVRVHCTVTV DRLAADAKVV SRSCDVKVHL LSWRN
101: LAGAVALAVL AAALAGVAYL VLRPKQPAYT VQALAVSGLA GLGNASSSSS SSSPVAFSPG FDATVRADNP NGRIGVRYEG GRSRVSVSYD GVPLADGDGA
201: WPAFYQGPRN VTVFVAKAKG SGIRFSQRVR GQMAAAERLR SVPFDVDVEV PLGKVRTWAV PVRVHCTVTV DRLAADAKVV SRSCDVKVHL LSWRN
001: MAERVYPADS PPQSGQFSGN FSSGEFPKKP APPPSTYVIQ VPKDQIYRIP PPENAHRFEQ LSRKKTNRSN CRCCFCSFLA AVFILIVLAG ISFAVLYLIY
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW
Arabidopsis Description
NHL13NDR1/HIN1-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD2]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.