Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, endoplasmic reticulum, plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- endoplasmic reticulum 2
- extracellular 1
- golgi 1
- plasma membrane 2
- vacuole 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G058740.3 | Barley | cytosol, plastid | 43.82 | 65.09 |
| TraesCS3A01G336800.1 | Wheat | cytosol | 75.7 | 64.85 |
| TraesCS3D01G329800.1 | Wheat | cytosol | 78.49 | 64.17 |
| TraesCS3B01G367900.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome, plastid | 78.49 | 59.7 |
| OQU87732 | Sorghum | cytosol | 57.77 | 49.15 |
| HORVU3Hr1G079540.2 | Barley | plastid | 76.89 | 48.98 |
| HORVU6Hr1G013910.1 | Barley | mitochondrion | 72.11 | 48.27 |
| Zm00001d043128_P001 | Maize | cytosol | 52.99 | 44.93 |
| Os01t0812100-01 | Rice | cytosol, mitochondrion, peroxisome | 59.36 | 42.94 |
| Zm00001d028765_P001 | Maize | plastid | 44.62 | 35.9 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, vacuole | 37.85 | 35.45 |
| TraesCS5B01G139500.1 | Wheat | cytosol, extracellular, peroxisome | 38.65 | 34.28 |
| GSMUA_Achr3P03620_001 | Banana | cytosol, peroxisome, vacuole | 34.66 | 32.95 |
| KRH73453 | Soybean | plastid | 35.06 | 32.23 |
| CDY38543 | Canola | cytosol, peroxisome, plasma membrane | 32.67 | 32.03 |
| Bra000526.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 32.67 | 32.03 |
| Bra034321.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 33.07 | 31.92 |
| CDY48196 | Canola | cytosol, peroxisome, plasma membrane | 33.07 | 31.92 |
| TraesCS4B01G128000.1 | Wheat | cytosol, extracellular, plasma membrane | 34.66 | 31.75 |
| KRH14686 | Soybean | plastid | 34.26 | 31.5 |
| CDX83252 | Canola | cytosol, peroxisome, plasma membrane | 31.47 | 30.86 |
| CDX77067 | Canola | cytosol, peroxisome, plasma membrane, plastid | 31.47 | 30.38 |
| AT2G27080.1 | Thale cress | cytosol, peroxisome, plasma membrane | 30.28 | 29.23 |
| VIT_06s0009g01620.t01 | Wine grape | plasma membrane, plastid | 30.68 | 28.84 |
| Solyc01g009160.2.1 | Tomato | plastid | 29.88 | 28.41 |
| PGSC0003DMT400022474 | Potato | plastid | 30.28 | 28.15 |
| TraesCS5B01G168700.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 23.11 | 27.75 |
| PGSC0003DMT400005086 | Potato | plastid | 28.69 | 27.38 |
| TraesCS1B01G183500.1 | Wheat | cytosol, nucleus, plasma membrane | 28.69 | 27.07 |
| TraesCS4B01G095400.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 23.11 | 25.0 |
| TraesCS4B01G095300.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 21.91 | 24.34 |
| AT5G21130.1 | Thale cress | cytosol | 27.09 | 24.2 |
| Bra006594.1-P | Field mustard | nucleus | 29.08 | 24.17 |
| CDY09100 | Canola | cytosol | 29.08 | 24.09 |
| CDY09101 | Canola | cytosol | 27.89 | 23.89 |
| CDX70963 | Canola | cytosol | 28.69 | 23.84 |
| CDX88825 | Canola | cytosol | 28.69 | 23.84 |
| Bra020147.1-P | Field mustard | cytosol | 28.69 | 23.76 |
| Bra020148.1-P | Field mustard | cytosol | 27.49 | 23.55 |
| TraesCS2B01G591000.1 | Wheat | peroxisome | 20.72 | 20.47 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G251100.1 | EnsemblPlantsGene:TraesCS1B01G251100 | InterPro:LEA_2 | PANTHER:PTHR31852 | PANTHER:PTHR31852:SF0 | PFAM:PF03168 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr1B:-:443487920..443488675
Molecular Weight (calculated)
26438.1 Da
IEP (calculated)
9.808
GRAVY (calculated)
0.279
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPPENARLF QHYTRHAGCS CLCACLYLPV EVLSLAILLA AAVGVVYLAF KPRQPAYSVV SLAVSGLAGV SNASAPGPLS PGFAATVHAD NSAKGKVGVH
101: YNGAGSRIAV SYEGVSLADG AWPAFYQAPC NITVFMAKAK GTGIRFSERE RGQMAAAERL RSVPFDVDIT VPVRLQLGGV RTWAVPVTVR CAMTVDRLAA
201: SAKVVSRPCD VNVPFLFRSG GTDAADARKN GYWLIRRAVL AGSGQGFMLL P
101: YNGAGSRIAV SYEGVSLADG AWPAFYQAPC NITVFMAKAK GTGIRFSERE RGQMAAAERL RSVPFDVDIT VPVRLQLGGV RTWAVPVTVR CAMTVDRLAA
201: SAKVVSRPCD VNVPFLFRSG GTDAADARKN GYWLIRRAVL AGSGQGFMLL P
001: MAERVYPADS PPQSGQFSGN FSSGEFPKKP APPPSTYVIQ VPKDQIYRIP PPENAHRFEQ LSRKKTNRSN CRCCFCSFLA AVFILIVLAG ISFAVLYLIY
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW
Arabidopsis Description
NHL13NDR1/HIN1-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD2]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.