Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 2
- plastid 1
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83252 | Canola | cytosol, peroxisome, plasma membrane | 96.48 | 96.48 |
| Bra034321.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 83.2 | 81.92 |
| AT2G27080.1 | Thale cress | cytosol, peroxisome, plasma membrane | 80.86 | 79.62 |
| KRH14686 | Soybean | plastid | 55.08 | 51.65 |
| VIT_06s0009g01620.t01 | Wine grape | plasma membrane, plastid | 53.12 | 50.94 |
| KRH73453 | Soybean | plastid | 53.52 | 50.18 |
| PGSC0003DMT400005086 | Potato | plastid | 51.17 | 49.81 |
| PGSC0003DMT400022474 | Potato | plastid | 49.61 | 47.04 |
| Solyc01g009160.2.1 | Tomato | plastid | 46.09 | 44.7 |
| Bra006594.1-P | Field mustard | nucleus | 44.53 | 37.75 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, vacuole | 39.06 | 37.31 |
| GSMUA_Achr3P03620_001 | Banana | cytosol, peroxisome, vacuole | 37.89 | 36.74 |
| OQU87732 | Sorghum | cytosol | 40.62 | 35.25 |
| Bra020148.1-P | Field mustard | cytosol | 40.23 | 35.15 |
| Bra020147.1-P | Field mustard | cytosol | 40.23 | 33.99 |
| Os12t0127200-01 | Rice | extracellular, plasma membrane, vacuole | 36.33 | 33.82 |
| TraesCS3A01G336800.1 | Wheat | cytosol | 38.28 | 33.45 |
| Os11t0130400-01 | Rice | extracellular, peroxisome, vacuole | 35.55 | 32.97 |
| TraesCS3D01G329800.1 | Wheat | cytosol | 39.45 | 32.9 |
| TraesCS1B01G251100.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 32.03 | 32.67 |
| TraesCS2A01G489300.1 | Wheat | cytosol, extracellular, plasma membrane | 33.59 | 32.45 |
| TraesCSU01G191800.1 | Wheat | cytosol, extracellular, plasma membrane | 34.38 | 32.35 |
| TraesCSU01G059700.1 | Wheat | cytosol, extracellular, plasma membrane | 34.38 | 32.35 |
| TraesCS2A01G489400.1 | Wheat | cytosol, extracellular, plasma membrane | 33.59 | 32.21 |
| TraesCS4D01G124700.1 | Wheat | cytosol, extracellular, plasma membrane | 34.38 | 32.12 |
| Bra039737.1-P | Field mustard | plasma membrane, plastid | 30.86 | 31.85 |
| Zm00001d043128_P001 | Maize | cytosol | 36.33 | 31.42 |
| TraesCS5D01G151200.1 | Wheat | cytosol, extracellular, plasma membrane | 34.77 | 31.23 |
| TraesCS4B01G128000.1 | Wheat | cytosol, extracellular, plasma membrane | 33.2 | 31.02 |
| TraesCS5A01G141200.1 | Wheat | cytosol, extracellular, peroxisome | 34.38 | 30.99 |
| Zm00001d005010_P001 | Maize | plastid | 33.59 | 30.28 |
| TraesCS3B01G367900.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome, plastid | 38.28 | 29.7 |
| TraesCS5B01G139500.1 | Wheat | cytosol, extracellular, peroxisome | 32.81 | 29.68 |
| Bra028103.1-P | Field mustard | cytosol, nucleus, plasma membrane | 29.3 | 29.41 |
| EES15581 | Sorghum | cytosol, mitochondrion, peroxisome | 34.77 | 29.18 |
| HORVU4Hr1G026770.2 | Barley | cytosol, plasma membrane | 34.38 | 29.14 |
| HORVU0Hr1G010640.1 | Barley | cytosol, peroxisome | 34.38 | 28.76 |
| Os01t0812100-01 | Rice | cytosol, mitochondrion, peroxisome | 38.67 | 28.53 |
| HORVU5Hr1G058740.3 | Barley | cytosol, plastid | 18.36 | 27.81 |
| Bra027969.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 28.12 | 26.77 |
| HORVU3Hr1G079540.2 | Barley | plastid | 39.84 | 25.89 |
| EES09185 | Sorghum | plastid | 36.72 | 23.74 |
| Zm00001d028765_P001 | Maize | plastid | 25.39 | 20.83 |
| HORVU6Hr1G013910.1 | Barley | mitochondrion | 30.08 | 20.53 |
Protein Annotations
| EnsemblPlants:Bra000526.1 | EnsemblPlants:Bra000526.1-P | EnsemblPlantsGene:Bra000526 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:LEA_2 | PANTHER:PTHR31852 | PANTHER:PTHR31852:SF0 | PFAM:PF03168 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0002540039 | UniProt:M4C8J8 | MapMan:35.1 | : | : | : |
Description
AT2G27080 (E=7e-112) | harpin-induced protein-related / HIN1-related / harpin-responsive protein-related
Coordinates
chrA03:-:11582917..11583687
Molecular Weight (calculated)
28464.5 Da
IEP (calculated)
9.726
GRAVY (calculated)
-0.050
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MAERVYPADS PPVSGQFSDN FSSGEFPRKP ATYVIQVPKD QIYHVPPPEN AHRFQHLSQK KVHRSRCRCC FCSFLAAIFI LVVLAGISLA VIYLVFRPEA
101: PKYSVEGFSV SGINLLSPSP NSPKFNVTVM SRNGNGQIGI YYEKGSTVDV FYEDVDLCNG ALPVFYQPAK NVTVVKTVLT GSKIQLTSGI RKEMHNDLSR
201: KSFPFKLKIR APVKIKIGSV KTWTITVNVY CDVTVDKLAA PSRIVSSKCS HDVDLW
101: PKYSVEGFSV SGINLLSPSP NSPKFNVTVM SRNGNGQIGI YYEKGSTVDV FYEDVDLCNG ALPVFYQPAK NVTVVKTVLT GSKIQLTSGI RKEMHNDLSR
201: KSFPFKLKIR APVKIKIGSV KTWTITVNVY CDVTVDKLAA PSRIVSSKCS HDVDLW
001: MAERVYPADS PPQSGQFSGN FSSGEFPKKP APPPSTYVIQ VPKDQIYRIP PPENAHRFEQ LSRKKTNRSN CRCCFCSFLA AVFILIVLAG ISFAVLYLIY
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW
Arabidopsis Description
NHL13NDR1/HIN1-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD2]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.