Factsheet for TraesCSU01G059700.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, cytosol

Predictor Summary:

plastid 1
cytosol 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G191800.1	Wheat	cytosol, extracellular, plasma membrane	100.0	100.0
TraesCS4D01G124700.1	Wheat	cytosol, extracellular, plasma membrane	94.49	93.8
TraesCS2A01G489300.1	Wheat	cytosol, extracellular, plasma membrane	90.81	93.21
TraesCS4B01G128000.1	Wheat	cytosol, extracellular, plasma membrane	93.01	92.34
TraesCS2A01G489400.1	Wheat	cytosol, extracellular, plasma membrane	88.97	90.64
HORVU4Hr1G026770.2	Barley	cytosol, plasma membrane	90.81	81.79
Os12t0127200-01	Rice	extracellular, plasma membrane, vacuole	66.54	65.82
Os11t0130400-01	Rice	extracellular, peroxisome, vacuole	66.54	65.58
Zm00001d005010_P001	Maize	plastid	66.91	64.08
EES15581	Sorghum	cytosol, mitochondrion, peroxisome	65.07	58.03
EES09185	Sorghum	plastid	65.81	45.2
GSMUA_Achr11P...	Banana	cytosol, peroxisome, vacuole	38.97	39.55
GSMUA_Achr3P03620_001	Banana	cytosol, peroxisome, vacuole	35.66	36.74
CDY48196	Canola	cytosol, peroxisome, plasma membrane	34.56	36.15
Bra034321.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.56	36.15
VIT_06s0009g01620.t01	Wine grape	plasma membrane, plastid	35.29	35.96
KRH14686	Soybean	plastid	35.66	35.53
CDX77067	Canola	cytosol, peroxisome, plasma membrane, plastid	33.82	35.38
PGSC0003DMT400022474	Potato	plastid	34.93	35.19
PGSC0003DMT400005086	Potato	plastid	33.82	34.98
KRH73453	Soybean	plastid	34.56	34.43
CDX83252	Canola	cytosol, peroxisome, plasma membrane	32.35	34.38
Bra000526.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.35	34.38
CDY38543	Canola	cytosol, peroxisome, plasma membrane	31.99	33.98
AT2G27080.1	Thale cress	cytosol, peroxisome, plasma membrane	31.25	32.69
Solyc01g009160.2.1	Tomato	plastid	31.25	32.2
CDX88825	Canola	cytosol	34.19	30.79
CDY09101	Canola	cytosol	33.09	30.72
Bra006594.1-P	Field mustard	nucleus	33.82	30.46
Bra020148.1-P	Field mustard	cytosol	32.72	30.38
CDY09100	Canola	cytosol	33.46	30.03
Bra020147.1-P	Field mustard	cytosol	33.46	30.03
AT5G21130.1	Thale cress	cytosol	30.88	29.89
CDX70963	Canola	cytosol	33.09	29.8

Protein Annotations

EnsemblPlants:TraesCSU01G059700.1	EnsemblPlantsGene:TraesCSU01G059700	InterPro:LEA_2	PANTHER:PTHR31852	PANTHER:PTHR31852:SF42	PFAM:PF03168
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrUn:-:47068022..47068840

Molecular Weight (calculated)

29297.5 Da

IEP (calculated)

11.009

GRAVY (calculated)

-0.026

Length

272 amino acids

Sequence
(BLAST)

001: MADRVHPAPL LPLSTPPAPP PDNSDAAAEN TPLRSTTAAA APGASYIVHV PKDQVLRVPP PDRARRYRKL AARPARRRML RRACCGACCA LLLLLLLAAA
101: FVGAVYLAFR PRAPSFSVTS LSVAGLLDAS PARLDAAVRA DNGANRKVGV DYRAGGEVRV SYSGVLLATG RWPAFYQPPR NVTLISMPLT GRDGLALTDD
201: QRARLAEQAA AGAVPLTVEA RVPVRVRLGK VLRTWTVDVW ARCQVTVDRI DGETTAANQG CTVKAKPLWW WW

Best Arabidopsis Sequence Match ( AT2G27080.1 )
(BLAST)

001: MAERVYPADS PPQSGQFSGN FSSGEFPKKP APPPSTYVIQ VPKDQIYRIP PPENAHRFEQ LSRKKTNRSN CRCCFCSFLA AVFILIVLAG ISFAVLYLIY
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW

Arabidopsis Description

NHL13NDR1/HIN1-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD2]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.