Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 2
- vacuole 2
- extracellular 2
- endoplasmic reticulum 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0130400-01 | Rice | extracellular, peroxisome, vacuole | 93.09 | 92.75 |
| TraesCS5D01G151200.1 | Wheat | cytosol, extracellular, plasma membrane | 75.64 | 72.98 |
| TraesCS5A01G141200.1 | Wheat | cytosol, extracellular, peroxisome | 75.27 | 72.89 |
| TraesCS5B01G139500.1 | Wheat | cytosol, extracellular, peroxisome | 74.91 | 72.79 |
| TraesCS4D01G124700.1 | Wheat | cytosol, extracellular, plasma membrane | 68.73 | 68.98 |
| HORVU0Hr1G010640.1 | Barley | cytosol, peroxisome | 76.0 | 68.3 |
| TraesCS2A01G489300.1 | Wheat | cytosol, extracellular, plasma membrane | 64.73 | 67.17 |
| Zm00001d005010_P001 | Maize | plastid | 69.09 | 66.9 |
| TraesCSU01G059700.1 | Wheat | cytosol, extracellular, plasma membrane | 65.82 | 66.54 |
| TraesCSU01G191800.1 | Wheat | cytosol, extracellular, plasma membrane | 65.82 | 66.54 |
| TraesCS2A01G489400.1 | Wheat | cytosol, extracellular, plasma membrane | 64.36 | 66.29 |
| TraesCS4B01G128000.1 | Wheat | cytosol, extracellular, plasma membrane | 65.82 | 66.06 |
| EES15581 | Sorghum | cytosol, mitochondrion, peroxisome | 72.73 | 65.57 |
| HORVU4Hr1G026770.2 | Barley | cytosol, plasma membrane | 68.0 | 61.92 |
| EES09185 | Sorghum | plastid | 71.27 | 49.49 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, vacuole | 44.0 | 45.15 |
| VIT_06s0009g01620.t01 | Wine grape | plasma membrane, plastid | 40.73 | 41.95 |
| GSMUA_Achr3P03620_001 | Banana | cytosol, peroxisome, vacuole | 39.64 | 41.29 |
| PGSC0003DMT400022474 | Potato | plastid | 39.64 | 40.37 |
| KRH14686 | Soybean | plastid | 40.0 | 40.29 |
| KRH73453 | Soybean | plastid | 38.91 | 39.19 |
| PGSC0003DMT400005086 | Potato | plastid | 37.45 | 39.16 |
| CDY48196 | Canola | cytosol, peroxisome, plasma membrane | 36.0 | 38.08 |
| Bra034321.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 36.0 | 38.08 |
| CDX77067 | Canola | cytosol, peroxisome, plasma membrane, plastid | 35.27 | 37.31 |
| Solyc01g009160.2.1 | Tomato | plastid | 35.64 | 37.12 |
| Bra000526.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 33.82 | 36.33 |
| CDX83252 | Canola | cytosol, peroxisome, plasma membrane | 33.82 | 36.33 |
| CDY38543 | Canola | cytosol, peroxisome, plasma membrane | 33.45 | 35.94 |
| Os01t0812100-01 | Rice | cytosol, mitochondrion, peroxisome | 44.36 | 35.16 |
| AT2G27080.1 | Thale cress | cytosol, peroxisome, plasma membrane | 32.73 | 34.62 |
| CDY09101 | Canola | cytosol | 35.27 | 33.11 |
| CDX88825 | Canola | cytosol | 35.27 | 32.12 |
| Bra020148.1-P | Field mustard | cytosol | 34.18 | 32.08 |
| CDX70963 | Canola | cytosol | 34.91 | 31.79 |
| Bra006594.1-P | Field mustard | nucleus | 34.91 | 31.79 |
| CDY09100 | Canola | cytosol | 34.91 | 31.68 |
| Bra020147.1-P | Field mustard | cytosol | 34.91 | 31.68 |
| AT5G21130.1 | Thale cress | cytosol | 31.64 | 30.96 |
| Os04t0677300-01 | Rice | plastid | 28.36 | 30.59 |
| Os08t0324200-01 | Rice | cytosol | 25.45 | 28.93 |
| Os09t0267400-01 | Rice | plasma membrane | 21.82 | 28.57 |
| Os02t0507900-00 | Rice | cytosol | 20.36 | 22.4 |
Protein Annotations
| EnsemblPlants:Os12t0127200-01 | EnsemblPlantsGene:Os12g0127200 | EntrezGene:4351391 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:LEA_2 | PANTHER:PTHR31852 | PANTHER:PTHR31852:SF42 | PFAM:PF03168 | ProteinID:ABA96360.1 | ProteinID:BAF29072.1 |
| ProteinID:BAT15707.1 | ProteinID:EAZ19521.1 | RefSeq:XP_015618855.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0000681B07 |
| UniProt:Q2QY99 | MapMan:35.1 | : | : | : | : |
Description
Harpin-induced 1 domain containing protein. (Os12t0127200-01)
Coordinates
chr12:-:1309549..1310703
Molecular Weight (calculated)
29377.7 Da
IEP (calculated)
11.082
GRAVY (calculated)
-0.007
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MADRVHPMPA PPPPSSSPPP GHDAAAATET TPLHPSFRGA PPPSPGTYII QIPKDQVLRV PPPDRARRYK KLAARPARRR RLRHACCGAF CGVLLLLLLA
101: AAFVGVVYLV FRPLAPSFSV ASLSIRGLDA LAVSSLTPQI DAAVRADNGA NKKTGIDYRG GGEVTVSYSG ERLAAGPWPA FHQAPRNVTV FSTALAGGGV
201: SLTEEQRKQL AADQAAGAVP LAVDAIVPVR LRFGKVLRTW TVDVKARCEV TVNKLAAAPA NRGCMVKVRP LWWWW
101: AAFVGVVYLV FRPLAPSFSV ASLSIRGLDA LAVSSLTPQI DAAVRADNGA NKKTGIDYRG GGEVTVSYSG ERLAAGPWPA FHQAPRNVTV FSTALAGGGV
201: SLTEEQRKQL AADQAAGAVP LAVDAIVPVR LRFGKVLRTW TVDVKARCEV TVNKLAAAPA NRGCMVKVRP LWWWW
001: MAERVYPADS PPQSGQFSGN FSSGEFPKKP APPPSTYVIQ VPKDQIYRIP PPENAHRFEQ LSRKKTNRSN CRCCFCSFLA AVFILIVLAG ISFAVLYLIY
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW
Arabidopsis Description
NHL13NDR1/HIN1-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD2]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.